Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
529 (510) |
PWM (Da): |
57263.24 (55204.1) |
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PI (pH): |
6.19 (5.82) |
Peptide Signal: |
cut: 20 range:20-529 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MKQSRALLFSLGLAQASLGAYIWPAKTDDLEDIIFNDSGFGEAGIGNHILQCGDEGRGGPGAQVAAAWLRTTYHDMATYRVAEGAGGVDASILFETDRMENIGIGFNNTFLDLLPGYSSR VSFADMLAAAAYFALRKCGGPALRVRAGRIDATEAGPFGVPDPTETFNVHMHKFARAGRDPSQMIMMIACGHSIGGVHGNDFPTITGNSDPAFTSHFDSTFTMYDNHISLDFISSNTSNP LASGPLMSRSDFRIFSSDMNATITRMSTPQGFRDTCQDTLSKMIDTVPSNVQLTEVIQPSEVRPFQLQLTLGPDGTVAFAGQIRVHTTDMQNGDKLDVKLLYTDRNGRSSATNVVQTTYA GRGASTGLDFQFDYYDINAALPNGISKFNIQINGKTYDNGGNGFPIQDNVVIQFPDSCFDPTTRQLTVYGVVSDRLKKPVVELEVVDKRPRIGSIVPALVKDSVKMARLGGAVLHPQGYG MYKGTYTYTTSDGGEFSLAAYTRDKSGKRIRIGDDYKKTTVFNGTTCVS* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (4 introns). Incorrect prediction from JGI. Large 3'end is missing. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAGCAAAGTCGTGCGCTCTTATTCTCCCTTGGTCTTGCACAAGCCAGTCTCGGCGCCTACATTTGGCCAGCGAAGACTGACGATCTCGAGGACATCATCTTCAATGATAGCGGCTTC GGCGAGGCTGGTATCGGGAACCACATCCTGCAATGTGGTGACGAAGGTCGTGGCGGTCCAGGGGCCCAGGTTGCAGCTGCTTGGGTAGGTATCGCGACTTTGCTCAATTAGCCAGTTATC ATGTACCTAACTAAATGCGCCACAGCTCTCCGCACCACGTACCACGATATGGCAACATACCGTGTCGCCGAGGGTGCCGGCGGTGTAGACGCCTCTATCCTTTTCGAAACGGACCGTATG GAGAACATCGGTATCGGATTCAACAACACATTCTTGTAAGTATCAAGTACGAGCTTTTGGACTTGGTATGGCGGAGTACTAACTAGGGGTGATTAGGGGGACTTGCTGCCGGGATACAGT TCACGTGTATCATTCGCTGATATGCTTGCGGCTGCTGCCTACTTTGCCCTCCGAAAGTGTGGCGGCCCGGCTCTGCGCGTGCGCGCTGGTCGTATTGACGCGACTGAGGCTGGTCCATTC GGTGTTCCCGACCCGACTGAGACGTTCAATGTCCACATGCACAAGTTTGCTCGTGCAGGTCGCGACCCGAGTCAAATGATCATGATGATTGCTTGCGGTCACTGTAAGTGCTATCAACCA TCTTTCGTTCAACGGTCCCCCTAACTCAGTGCCTTTAGCACAATCGGTGGTGTTCACGGGAACGATTTCCCAACAATCACCGGCAACTCCGACCCGGCCTTCACCTCTCACTTTGACTCG ACCTTCACCATGTACGACAACCATATCTCTCTCGACTTCATCTCCAGCAACACCAGCAACCCCTTGGCCTCTGGGCCCTTGATGAGTCGCTCCGACTTCCGTATCTTCTCATCAGACATG AACGCCACTATCACACGGATGTCCACGCCTCAGGGCTTCCGTGACACCTGCCAGGACACGCTCAGCAAAATGATTGACACCGTTCCCAGTAACGTCCAACTGACTGAAGTTATCCAGCCC AGTGAGGTCAGGCCATTCCAGCTTCAACTCACACTCGGCCCCGACGGAACTGTTGCATTTGCCGGGCAAATCCGTGTTCACACCACCGACATGCAAAATGGTGACAAGCTCGATGTCAAG CTGCTCTACACTGACAGGAACGGCCGTAGCAGTGCTACCAACGTAGTCCAGACCACCTATGCTGGTCGTGGTGCTAGTACGGGACTCGACTTCCAGTTCGACGTGAGTAGCATAGACATG CACCTGAATGCACTATAACTTACAGCCCTTGTCTCCCTTAGTATATTATGATATCAACGCAGCGTTGCCAAACGGTATCTCCAAGTTCAACATCCAGATCAACGGCAAAACATACGACAA CGGGGGCAATGGTTTCCCCATCCAAGACAACGTTGTCATCCAATTCCCTGATTCATGCTTCGACCCTACTACCAGGCAATTGACTGTGTACGGTGTTGTTAGCGACCGCCTCAAGAAGCC CGTAGTTGAGCTCGAAGTTGTCGACAAGCGCCCCCGCATTGGGTCGATTGTCCCCGCACTCGTCAAGGACTCTGTCAAGATGGCCAGGTTGGGCGGTGCTGTCTTGCACCCACAGGGCTA CGGCATGTACAAGGGTACCTACACATACACAACTTCAGACGGTGGTGAATTCAGTCTTGCTGCGTATACCAGAGATAAGAGCGGAAAGCGCATTCGTATTGGAGATGACTACAAGAAGAC AACGGTCTTCAATGGCACCACATGTGTAAGTTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAGCAAAGTCGTGCGCTCTTATTCTCCCTTGGTCTTGCACAAGCCAGTCTCGGCGCCTACATTTGGCCAGCGAAGACTGACGATCTCGAGGACATCATCTTCAATGATAGCGGCTTC GGCGAGGCTGGTATCGGGAACCACATCCTGCAATGTGGTGACGAAGGTCGTGGCGGTCCAGGGGCCCAGGTTGCAGCTGCTTGGCTCCGCACCACGTACCACGATATGGCAACATACCGT GTCGCCGAGGGTGCCGGCGGTGTAGACGCCTCTATCCTTTTCGAAACGGACCGTATGGAGAACATCGGTATCGGATTCAACAACACATTCTTGGACTTGCTGCCGGGATACAGTTCACGT GTATCATTCGCTGATATGCTTGCGGCTGCTGCCTACTTTGCCCTCCGAAAGTGTGGCGGCCCGGCTCTGCGCGTGCGCGCTGGTCGTATTGACGCGACTGAGGCTGGTCCATTCGGTGTT CCCGACCCGACTGAGACGTTCAATGTCCACATGCACAAGTTTGCTCGTGCAGGTCGCGACCCGAGTCAAATGATCATGATGATTGCTTGCGGTCACTCAATCGGTGGTGTTCACGGGAAC GATTTCCCAACAATCACCGGCAACTCCGACCCGGCCTTCACCTCTCACTTTGACTCGACCTTCACCATGTACGACAACCATATCTCTCTCGACTTCATCTCCAGCAACACCAGCAACCCC TTGGCCTCTGGGCCCTTGATGAGTCGCTCCGACTTCCGTATCTTCTCATCAGACATGAACGCCACTATCACACGGATGTCCACGCCTCAGGGCTTCCGTGACACCTGCCAGGACACGCTC AGCAAAATGATTGACACCGTTCCCAGTAACGTCCAACTGACTGAAGTTATCCAGCCCAGTGAGGTCAGGCCATTCCAGCTTCAACTCACACTCGGCCCCGACGGAACTGTTGCATTTGCC GGGCAAATCCGTGTTCACACCACCGACATGCAAAATGGTGACAAGCTCGATGTCAAGCTGCTCTACACTGACAGGAACGGCCGTAGCAGTGCTACCAACGTAGTCCAGACCACCTATGCT GGTCGTGGTGCTAGTACGGGACTCGACTTCCAGTTCGACTATTATGATATCAACGCAGCGTTGCCAAACGGTATCTCCAAGTTCAACATCCAGATCAACGGCAAAACATACGACAACGGG GGCAATGGTTTCCCCATCCAAGACAACGTTGTCATCCAATTCCCTGATTCATGCTTCGACCCTACTACCAGGCAATTGACTGTGTACGGTGTTGTTAGCGACCGCCTCAAGAAGCCCGTA GTTGAGCTCGAAGTTGTCGACAAGCGCCCCCGCATTGGGTCGATTGTCCCCGCACTCGTCAAGGACTCTGTCAAGATGGCCAGGTTGGGCGGTGCTGTCTTGCACCCACAGGGCTACGGC ATGTACAAGGGTACCTACACATACACAACTTCAGACGGTGGTGAATTCAGTCTTGCTGCGTATACCAGAGATAAGAGCGGAAAGCGCATTCGTATTGGAGATGACTACAAGAAGACAACG GTCTTCAATGGCACCACATGTGTAAGTTGA |
Retrieve as FASTA
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