View Redoxidase 11713

Entry information : COsaGPx01

Entry ID	11713
Creation	2013-04-09 (Christophe Dunand)
Last sequence changes	2013-04-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-08-22 (Catherine Mathe (Scipio))

Peroxidase information: COsaGPx01

Name

COsaGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Ascomycota Dothideomycetes Pleosporaceae Cochliobolus

Organism

Cochliobolus sativus [TaxId: 45130 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	COsaGPx01 start..stop	S start..stop
CheGPx01_C4	336	1.33e-120	1..169	1..169
CheGPx01_C5	335	1.76e-120	1..168	1..168
PterGPx01	326	3.15e-115	1..169	101..269
PtritGPx01	326	3.89e-115	1..168	104..271

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	510183..510225	41	N° 2	509731..509996	264	N° 3	509385..509579	193
complement(join(509385..509579,509731..509996,510183..510225))

Literature and cross-references COsaGPx01

DNA ref.	JGI genome: scaffold_18 (510225..509385)
Cluster/Prediction ref.	JGI gene: 102605

Protein sequence: COsaGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	168 (302)
PWM (Da):	18931.7 (31526.5)
PI (pH):	8.77 (5.07)	Peptide Signal:	cut: 33 range:33-334

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASATSFYEFKPKDKKGQAYDLSQLSNKVVLVVNTASKCGFTPQFEGLEKLYKDIKSKYPNDFEIIGFPCNQFGGQDPGTNEEIQEFCQVNYGVSFPVLGKIDVNGATADPAFEWLKNEK
PGLMGLKRVKWNFEKFLIGRDGKVKGRWASTKKPEDLKAEIEKELSKK*

Retrieve as FASTA

Remarks

Complete sequence from genomic (2 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCTGCGACGAGCTTTTACGAGTTTAAGCCAAAGGACAGTGAGTTTGCCCTCTCTCCCTCTCCGCCGTTTTTACCTCGAGGATGTACACGAAGAAGAGGAAGCGAAAATATTCTT
TTTCCTGCGAAGCCAGAAATCAATATACTCTCCTCCCTTCCCCTTCCGCCTCTCCTACCGGCCCCCCCCTCTCCCTCAAGCTTCCACACTAACCCACGTCCCCTCACAGAAAAAAGGGCC
AGGCCTACGACCTCTCCCAACTCTCCAATAAAGTCGTCCTCGTCGTAAACACGGCCTCCAAATGCGGCTTCACGCCTCAATTTGAAGGCCTCGAGAAACTCTATAAGGACATCAAATCTA
AATACCCGAATGACTTTGAGATCATCGGTTTCCCATGCAACCAGTTCGGCGGTCAGGACCCTGGAACAAATGAGGAGATTCAGGAGTTTTGCCAGGTGAATTATGGCGTTAGTTTTCCAG
TTTTGGGCAAGATTGATGTACGTACTTCCCTTCCCTTTCCTCCCTTTCTTCTTCTTTTTCGTTAGCTTCACGGTGCCTCTGCCGTTGTTGCTTTGTGCCGCAGAAACACGACCATACAAG
ATATTAGAAAGATATTTGGAATGGCTACTAACGTACGCGTGCGAATAGGTGTCAACGGCGCAACCGCAGACCCCGCCTTCGAATGGCTCAAGAACGAAAAGCCCGGCCTCATGGGCCTCA
AGCGTGTCAAGTGGAACTTTGAAAAGTTCCTCATTGGACGCGATGGCAAAGTCAAGGGACGGTGGGCGAGTACGAAGAAGCCGGAGGATCTCAAGGCGGAGATTGAGAAGGAGTTGAGCA
AGAAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCTGCGACGAGCTTTTACGAGTTTAAGCCAAAGGACAAAAAGGGCCAGGCCTACGACCTCTCCCAACTCTCCAATAAAGTCGTCCTCGTCGTAAACACGGCCTCCAAATGCGGC
TTCACGCCTCAATTTGAAGGCCTCGAGAAACTCTATAAGGACATCAAATCTAAATACCCGAATGACTTTGAGATCATCGGTTTCCCATGCAACCAGTTCGGCGGTCAGGACCCTGGAACA
AATGAGGAGATTCAGGAGTTTTGCCAGGTGAATTATGGCGTTAGTTTTCCAGTTTTGGGCAAGATTGATGTCAACGGCGCAACCGCAGACCCCGCCTTCGAATGGCTCAAGAACGAAAAG
CCCGGCCTCATGGGCCTCAAGCGTGTCAAGTGGAACTTTGAAAAGTTCCTCATTGGACGCGATGGCAAAGTCAAGGGACGGTGGGCGAGTACGAAGAAGCCGGAGGATCTCAAGGCGGAG
ATTGAGAAGGAGTTGAGCAAGAAA

Retrieve as FASTA