Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
367 |
| PWM (Da): |
40557.15 |
|
| PI (pH):
| 8.88 |
|
Sequence 408
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASAARSASRAFLRSTPATSAFRPAARSARYALSSQGFRTAARRGYASEAGSSKSSNGLLWAGVAAAGAAGAFFFFQSGDSSVTSKAFVPTQEDYQKVYDAIAKKLVDETDYDDGSYGPVLVRLAWHASGTYDKETGTGGSNGATMRFAPESDHGANAGLKHARDFLEPIKQQFPWITYSDLWTLAGSAAIQECGGPAIPWRPGRQDRDVAACTPDGRLPDASKDQRHVRDIFYRMGFNDQEIVALIGAHALGRAHTDRSGFDGPWDFSPTVFTNDFFKLLLDEKWQQRKWNGPVQFTDKTTKTLMMLPTDLAMIKDKEFRKHVERYAKDNDVFFKEFTDVYVKLLELGVPFTSKAEDRYVFKTFEA |
Retrieve as FASTA
|
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| Remarks |
Complete sequence from genomic (1 intron). Incorrect prediction from JGI (CCP and DNAJ ORFs are fused). |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGGCCTCCGCTGCTCGCTCGGCCTCTCGGGCCTTCCTTCGCTCGACCCCGGCTACCTCGGCTTTCAGACCCGCTGCTCGCAGCGCTCGTTATGCTCTTTCCTCCCAGGGTTTCCGCACCG
CTGCTCGCCGCGGCTACGCCTCCGAGGCTGGCTCCAGCAAGTCCTCTAACGGCCTTTTGTGGGCTGGTGTTGCTGCTGCTGGCGCCGCTGGTGCTTTCTTCTTCTTCCAGAGCGGCGATT
CTTCCGTGACCTCCAAGGCTTTCGTCCCCACCCAGGAGGACTACCAGAAGGTGTACGATGCGATTGCCAAGAAGCTGGTGGACGAGACCGACTATGACGATGGCAGCTACGGCCCCGTAA
GTCTTGACAAACCAATATTGAAGAGTCCTTGTTCTTGTTCTGACACGACACTAATCTCGCAATGCTGATAGGTCCTTGTCCGCCTGGCCTGGCACGCAAGTGGCACCTATGACAAGGAGA
CCGGCACTGGTGGTAGCAACGGTGCTACCATGCGGTTCGCTCCCGAGTCCGATCACGGTGCCAACGCCGGTCTGAAGCACGCCAGAGACTTCCTCGAGCCCATCAAGCAGCAGTTCCCCT
GGATCACCTACTCTGACCTGTGGACCCTGGCCGGCTCTGCCGCCATCCAGGAGTGCGGTGGCCCTGCCATCCCCTGGAGACCCGGCCGTCAGGACCGGGACGTCGCCGCCTGCACTCCCG
ACGGCCGTCTGCCCGACGCCTCCAAGGACCAGAGACACGTCCGTGACATCTTCTACCGCATGGGCTTCAACGACCAGGAGATCGTGGCCCTGATTGGTGCCCACGCCCTGGGTCGCGCTC
ACACCGACCGCTCCGGCTTCGACGGTCCCTGGGACTTCAGCCCCACTGTCTTCACCAACGACTTCTTCAAGCTCCTGCTCGACGAGAAGTGGCAGCAGCGGAAGTGGAACGGCCCCGTCC
AGTTCACCGATAAGACCACCAAGACCCTGATGATGCTCCCCACCGACCTTGCCATGATCAAGGATAAGGAGTTCCGCAAGCACGTCGAGCGCTACGCCAAGGACAACGATGTCTTCTTCA
AGGAGTTCACCGACGTGTACGTCAAGCTCCTCGAGCTGGGTGTTCCTTTCACCAGCAAGGCCGAGGACCGCTACGTCTTCAAGACCTTCGAGGCA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGGCCTCCGCTGCTCGCTCGGCCTCTCGGGCCTTCCTTCGCTCGACCCCGGCTACCTCGGCTTTCAGACCCGCTGCTCGCAGCGCTCGTTATGCTCTTTCCTCCCAGGGTTTCCGCACCG
CTGCTCGCCGCGGCTACGCCTCCGAGGCTGGCTCCAGCAAGTCCTCTAACGGCCTTTTGTGGGCTGGTGTTGCTGCTGCTGGCGCCGCTGGTGCTTTCTTCTTCTTCCAGAGCGGCGATT
CTTCCGTGACCTCCAAGGCTTTCGTCCCCACCCAGGAGGACTACCAGAAGGTGTACGATGCGATTGCCAAGAAGCTGGTGGACGAGACCGACTATGACGATGGCAGCTACGGCCCCGTCC
TTGTCCGCCTGGCCTGGCACGCAAGTGGCACCTATGACAAGGAGACCGGCACTGGTGGTAGCAACGGTGCTACCATGCGGTTCGCTCCCGAGTCCGATCACGGTGCCAACGCCGGTCTGA
AGCACGCCAGAGACTTCCTCGAGCCCATCAAGCAGCAGTTCCCCTGGATCACCTACTCTGACCTGTGGACCCTGGCCGGCTCTGCCGCCATCCAGGAGTGCGGTGGCCCTGCCATCCCCT
GGAGACCCGGCCGTCAGGACCGGGACGTCGCCGCCTGCACTCCCGACGGCCGTCTGCCCGACGCCTCCAAGGACCAGAGACACGTCCGTGACATCTTCTACCGCATGGGCTTCAACGACC
AGGAGATCGTGGCCCTGATTGGTGCCCACGCCCTGGGTCGCGCTCACACCGACCGCTCCGGCTTCGACGGTCCCTGGGACTTCAGCCCCACTGTCTTCACCAACGACTTCTTCAAGCTCC
TGCTCGACGAGAAGTGGCAGCAGCGGAAGTGGAACGGCCCCGTCCAGTTCACCGATAAGACCACCAAGACCCTGATGATGCTCCCCACCGACCTTGCCATGATCAAGGATAAGGAGTTCC
GCAAGCACGTCGAGCGCTACGCCAAGGACAACGATGTCTTCTTCAAGGAGTTCACCGACGTGTACGTCAAGCTCCTCGAGCTGGGTGTTCCTTTCACCAGCAAGGCCGAGGACCGCTACG
TCTTCAAGACCTTCGAGGCA |
Retrieve as FASTA
|
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