Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
367 |
| PWM (Da): |
40557.15 |
|
| PI (pH):
| 8.88 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASAARSASRAFLRSTPATSAFRPAARSARYALSSQGFRTAARRGYASEAGSSKSSNGLLWAGVAAAGAAGAFFFFQSGDSSVTSKAFVPTQEDYQKVYDAIAKKLVDETDYDDGSYGPVLVRLAWHASGTYDKETGTGGSNGATMRFAPESDHGANAGLKHARDFLEPIKQQFPWITYSDLWTLAGSAAIQECGGPAIPWRPGRQDRDVAACTPDGRLPDASKDQRHVRDIFYRMGFNDQEIVALIGAHALGRAHTDRSGFDGPWDFSPTVFTNDFFKLLLDEKWQQRKWNGPVQFTDKTTKTLMMLPTDLAMIKDKEFRKHVERYAKDNDVFFKEFTDVYVKLLELGVPFTSKAEDRYVFKTFEA |
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic (1 intron). Incorrect prediction from JGI (CCP and DNAJ ORFs are fused). |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCCTCCGCTGCTCGCTCGGCCTCTCGGGCCTTCCTTCGCTCGACCCCGGCTACCTCGGCTTTCAGACCCGCTGCTCGCAGCGCTCGTTATGCTCTTTCCTCCCAGGGTTTCCGCACC
GCTGCTCGCCGCGGCTACGCCTCCGAGGCTGGCTCCAGCAAGTCCTCTAACGGCCTTTTGTGGGCTGGTGTTGCTGCTGCTGGCGCCGCTGGTGCTTTCTTCTTCTTCCAGAGCGGCGAT
TCTTCCGTGACCTCCAAGGCTTTCGTCCCCACCCAGGAGGACTACCAGAAGGTGTACGATGCGATTGCCAAGAAGCTGGTGGACGAGACCGACTATGACGATGGCAGCTACGGCCCCGTA
AGTCTTGACAAACCAATATTGAAGAGTCCTTGTTCTTGTTCTGACACGACACTAATCTCGCAATGCTGATAGGTCCTTGTCCGCCTGGCCTGGCACGCAAGTGGCACCTATGACAAGGAG
ACCGGCACTGGTGGTAGCAACGGTGCTACCATGCGGTTCGCTCCCGAGTCCGATCACGGTGCCAACGCCGGTCTGAAGCACGCCAGAGACTTCCTCGAGCCCATCAAGCAGCAGTTCCCC
TGGATCACCTACTCTGACCTGTGGACCCTGGCCGGCTCTGCCGCCATCCAGGAGTGCGGTGGCCCTGCCATCCCCTGGAGACCCGGCCGTCAGGACCGGGACGTCGCCGCCTGCACTCCC
GACGGCCGTCTGCCCGACGCCTCCAAGGACCAGAGACACGTCCGTGACATCTTCTACCGCATGGGCTTCAACGACCAGGAGATCGTGGCCCTGATTGGTGCCCACGCCCTGGGTCGCGCT
CACACCGACCGCTCCGGCTTCGACGGTCCCTGGGACTTCAGCCCCACTGTCTTCACCAACGACTTCTTCAAGCTCCTGCTCGACGAGAAGTGGCAGCAGCGGAAGTGGAACGGCCCCGTC
CAGTTCACCGATAAGACCACCAAGACCCTGATGATGCTCCCCACCGACCTTGCCATGATCAAGGATAAGGAGTTCCGCAAGCACGTCGAGCGCTACGCCAAGGACAACGATGTCTTCTTC
AAGGAGTTCACCGACGTGTACGTCAAGCTCCTCGAGCTGGGTGTTCCTTTCACCAGCAAGGCCGAGGACCGCTACGTCTTCAAGACCTTCGAGGCA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCCTCCGCTGCTCGCTCGGCCTCTCGGGCCTTCCTTCGCTCGACCCCGGCTACCTCGGCTTTCAGACCCGCTGCTCGCAGCGCTCGTTATGCTCTTTCCTCCCAGGGTTTCCGCACC
GCTGCTCGCCGCGGCTACGCCTCCGAGGCTGGCTCCAGCAAGTCCTCTAACGGCCTTTTGTGGGCTGGTGTTGCTGCTGCTGGCGCCGCTGGTGCTTTCTTCTTCTTCCAGAGCGGCGAT
TCTTCCGTGACCTCCAAGGCTTTCGTCCCCACCCAGGAGGACTACCAGAAGGTGTACGATGCGATTGCCAAGAAGCTGGTGGACGAGACCGACTATGACGATGGCAGCTACGGCCCCGTC
CTTGTCCGCCTGGCCTGGCACGCAAGTGGCACCTATGACAAGGAGACCGGCACTGGTGGTAGCAACGGTGCTACCATGCGGTTCGCTCCCGAGTCCGATCACGGTGCCAACGCCGGTCTG
AAGCACGCCAGAGACTTCCTCGAGCCCATCAAGCAGCAGTTCCCCTGGATCACCTACTCTGACCTGTGGACCCTGGCCGGCTCTGCCGCCATCCAGGAGTGCGGTGGCCCTGCCATCCCC
TGGAGACCCGGCCGTCAGGACCGGGACGTCGCCGCCTGCACTCCCGACGGCCGTCTGCCCGACGCCTCCAAGGACCAGAGACACGTCCGTGACATCTTCTACCGCATGGGCTTCAACGAC
CAGGAGATCGTGGCCCTGATTGGTGCCCACGCCCTGGGTCGCGCTCACACCGACCGCTCCGGCTTCGACGGTCCCTGGGACTTCAGCCCCACTGTCTTCACCAACGACTTCTTCAAGCTC
CTGCTCGACGAGAAGTGGCAGCAGCGGAAGTGGAACGGCCCCGTCCAGTTCACCGATAAGACCACCAAGACCCTGATGATGCTCCCCACCGACCTTGCCATGATCAAGGATAAGGAGTTC
CGCAAGCACGTCGAGCGCTACGCCAAGGACAACGATGTCTTCTTCAAGGAGTTCACCGACGTGTACGTCAAGCTCCTCGAGCTGGGTGTTCCTTTCACCAGCAAGGCCGAGGACCGCTAC
GTCTTCAAGACCTTCGAGGCA |
Retrieve as FASTA
|
|
