Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
367 |
PWM (Da): |
40557.15 |
|
PI (pH):
| 8.88 |
|
Sequence 408
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASAARSASRAFLRSTPATSAFRPAARSARYALSSQGFRTAARRGYASEAGSSKSSNGLLWAGVAAAGAAGAFFFFQSGDSSVTSKAFVPTQEDYQKVYDAIAKKLVDETDYDDGSYGPVLVRLAWHASGTYDKETGTGGSNGATMRFAPESDHGANAGLKHARDFLEPIKQQFPWITYSDLWTLAGSAAIQECGGPAIPWRPGRQDRDVAACTPDGRLPDASKDQRHVRDIFYRMGFNDQEIVALIGAHALGRAHTDRSGFDGPWDFSPTVFTNDFFKLLLDEKWQQRKWNGPVQFTDKTTKTLMMLPTDLAMIKDKEFRKHVERYAKDNDVFFKEFTDVYVKLLELGVPFTSKAEDRYVFKTFEA |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (1 intron). Incorrect prediction from JGI (CCP and DNAJ ORFs are fused). |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGGCCTCCGCTGCTCGCTCGGCCTCTCGGGCCTTCCTTCGCTCGACCCCGGCTACCTCGGCTTTCAGACCCGCTGCTCGCAGCGCTCGTTATGCTCTTTCCTCCCAGGGTTTCCGCACCG CTGCTCGCCGCGGCTACGCCTCCGAGGCTGGCTCCAGCAAGTCCTCTAACGGCCTTTTGTGGGCTGGTGTTGCTGCTGCTGGCGCCGCTGGTGCTTTCTTCTTCTTCCAGAGCGGCGATT CTTCCGTGACCTCCAAGGCTTTCGTCCCCACCCAGGAGGACTACCAGAAGGTGTACGATGCGATTGCCAAGAAGCTGGTGGACGAGACCGACTATGACGATGGCAGCTACGGCCCCGTAA GTCTTGACAAACCAATATTGAAGAGTCCTTGTTCTTGTTCTGACACGACACTAATCTCGCAATGCTGATAGGTCCTTGTCCGCCTGGCCTGGCACGCAAGTGGCACCTATGACAAGGAGA CCGGCACTGGTGGTAGCAACGGTGCTACCATGCGGTTCGCTCCCGAGTCCGATCACGGTGCCAACGCCGGTCTGAAGCACGCCAGAGACTTCCTCGAGCCCATCAAGCAGCAGTTCCCCT GGATCACCTACTCTGACCTGTGGACCCTGGCCGGCTCTGCCGCCATCCAGGAGTGCGGTGGCCCTGCCATCCCCTGGAGACCCGGCCGTCAGGACCGGGACGTCGCCGCCTGCACTCCCG ACGGCCGTCTGCCCGACGCCTCCAAGGACCAGAGACACGTCCGTGACATCTTCTACCGCATGGGCTTCAACGACCAGGAGATCGTGGCCCTGATTGGTGCCCACGCCCTGGGTCGCGCTC ACACCGACCGCTCCGGCTTCGACGGTCCCTGGGACTTCAGCCCCACTGTCTTCACCAACGACTTCTTCAAGCTCCTGCTCGACGAGAAGTGGCAGCAGCGGAAGTGGAACGGCCCCGTCC AGTTCACCGATAAGACCACCAAGACCCTGATGATGCTCCCCACCGACCTTGCCATGATCAAGGATAAGGAGTTCCGCAAGCACGTCGAGCGCTACGCCAAGGACAACGATGTCTTCTTCA AGGAGTTCACCGACGTGTACGTCAAGCTCCTCGAGCTGGGTGTTCCTTTCACCAGCAAGGCCGAGGACCGCTACGTCTTCAAGACCTTCGAGGCA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGGCCTCCGCTGCTCGCTCGGCCTCTCGGGCCTTCCTTCGCTCGACCCCGGCTACCTCGGCTTTCAGACCCGCTGCTCGCAGCGCTCGTTATGCTCTTTCCTCCCAGGGTTTCCGCACCG CTGCTCGCCGCGGCTACGCCTCCGAGGCTGGCTCCAGCAAGTCCTCTAACGGCCTTTTGTGGGCTGGTGTTGCTGCTGCTGGCGCCGCTGGTGCTTTCTTCTTCTTCCAGAGCGGCGATT CTTCCGTGACCTCCAAGGCTTTCGTCCCCACCCAGGAGGACTACCAGAAGGTGTACGATGCGATTGCCAAGAAGCTGGTGGACGAGACCGACTATGACGATGGCAGCTACGGCCCCGTCC TTGTCCGCCTGGCCTGGCACGCAAGTGGCACCTATGACAAGGAGACCGGCACTGGTGGTAGCAACGGTGCTACCATGCGGTTCGCTCCCGAGTCCGATCACGGTGCCAACGCCGGTCTGA AGCACGCCAGAGACTTCCTCGAGCCCATCAAGCAGCAGTTCCCCTGGATCACCTACTCTGACCTGTGGACCCTGGCCGGCTCTGCCGCCATCCAGGAGTGCGGTGGCCCTGCCATCCCCT GGAGACCCGGCCGTCAGGACCGGGACGTCGCCGCCTGCACTCCCGACGGCCGTCTGCCCGACGCCTCCAAGGACCAGAGACACGTCCGTGACATCTTCTACCGCATGGGCTTCAACGACC AGGAGATCGTGGCCCTGATTGGTGCCCACGCCCTGGGTCGCGCTCACACCGACCGCTCCGGCTTCGACGGTCCCTGGGACTTCAGCCCCACTGTCTTCACCAACGACTTCTTCAAGCTCC TGCTCGACGAGAAGTGGCAGCAGCGGAAGTGGAACGGCCCCGTCCAGTTCACCGATAAGACCACCAAGACCCTGATGATGCTCCCCACCGACCTTGCCATGATCAAGGATAAGGAGTTCC GCAAGCACGTCGAGCGCTACGCCAAGGACAACGATGTCTTCTTCAAGGAGTTCACCGACGTGTACGTCAAGCTCCTCGAGCTGGGTGTTCCTTTCACCAGCAAGGCCGAGGACCGCTACG TCTTCAAGACCTTCGAGGCA |
Retrieve as FASTA
|
|