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Entry information : PrubCcP01
Entry ID 11737
Creation 2013-04-10 (Christophe Dunand)
Last sequence changes 2013-04-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-20 (Catherine Mathe (Scipio))
Peroxidase information: PrubCcP01
Name PrubCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Paxillaceae Paxillus
Organism Paxillus rubicundulus    [TaxId: 463315 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PrubCcP01
start..stop		 S start..stop
PadelCcP01 775 0 1..374 1..374
PinvCcP 749 0 1..374 1..374
GliviCcP01_BX 689 0 1..371 1..371
HpinCcP 678 0 1..372 1..371
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11737' 'join(3302..3610,3671..3719,3773..3854,3913..4183,4243..4325,4382..4459,4513..4584,4637..4720,4777..4870)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3302..3610 307 N° 2 3671..3719 47 N° 3 3773..3854 80 N° 4 3913..4183 269
N° 5 4243..4325 81 N° 6 4382..4459 76 N° 7 4513..4584 70 N° 8 4637..4720 82
N° 9 4777..4870 92  
join(3302..3610,3671..3719,3773..3854,3913..4183,4243..4325,4382..4459,4513..458 4,4637..4720,4777..4870)


exon

Literature and cross-references PrubCcP01
DNA ref. JGI genome:   scaffold_511 (3302..4870)
Cluster/Prediction ref. JGI gene:   34734
Protein sequence: PrubCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   373 (300)
PWM (Da):   %s   41449.68 (31966.9)  
PI (pH):   %s   8.83 (7.68) Peptide Signal:   %s   cut: 29 range:29-328
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSFTAAFRVPVRRAVFSTSFRRAATEVRANSFRKFSTEVPPPAPKSNTALYAGLGAIAFGGVAYYLYTSSSDTAKEASTTVKSAAQTAKVATKFTPTKADYQKVYNRIAEVIDDASDYDD
GSYGPVLLRLAWHASGTYDKNTGTGGSNYATMRFEPEALHGANAGLHVARGLMEKVKKEFDWISYGDLWTLAGVCAVQEMAGPKIPWRPGRIDGFVTHVTPDGRLPDATQGAPHIRDIFY
RMGFNDQEIVALSGAHALGRCHVDRSGFQGPWTFSPTTFTNDYFKLLFNEKWVWRSWNGPKQLEDKKTRSLMMLPTDYVLTQDKSFQKYAKAYAEDNELFFKDFASAFSRLLELGVPTQQ
FVAAEPWIMGDEA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (8 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTTTACTGCAGCTTTCCGTGTTCCTGTACGCAGGGCTGTCTTCTCCACTTCGTTCAGGAGGGCAGCCACCGAGGTCAGGGCGAATTCGTTCAGGAAATTCTCGACCGAGGTTCCC
CCTCCTGCTCCCAAGTCAAACACCGCTCTCTATGCCGGACTCGGAGCTATTGCGTTCGGTGGTGTAGCTTACTATTTGTATACCTCTTCTTCCGACACTGCAAAGGAGGCGTCCACAACT
GTCAAGTCTGCTGCTCAGACCGCGAAGGTTGCTACCAAGTTCACGCCTACCAAGGCGGACTACCAAAAGAGGTGCATAGTGTTGTCACCCGTCCTTTCCAGAGTATCCCGCCAAACTAAA
AATATCATTAGGTGTACAATCGCATCGCAGAGGTTATTGACGACGCTAGTGATTACGATGTGGTAAAACCGCAAGTTATCCGTTCCATTCATAGTCGCTCAATGTCACCTCTCAGATGGC
TCTTATGGCCCCGTCCTTCTCCGTCTTGCATGGCACGCCTCTGGCACGTATGATAAGAACACGGGTACCGGTGGAAGAGGCACGTCCCATCATTCTCTCCTACGATGATCGTTTTATCAC
TTACGTGAAATCACCAGCAACTACGCCACGATGCGCTTCGAGCCAGAGGCTCTACACGGAGCCAACGCGGGTCTGCATGTAGCCCGCGGCCTCATGGAAAAAGTCAAGAAGGAGTTCGAC
TGGATTTCTTACGGTGATCTGTGGACTCTTGCCGGTGTTTGTGCCGTCCAGGAGATGGCTGGCCCAAAGATCCCTTGGCGCCCTGGACGTATTGATGGCTTCGTGACCCACGTGACTCCT
GATGGGCGTCTCCCTGATGCCACCCAGGGCGCACCACACATTCGGGATATGTGGGTATCAGGCTGGCGTTACTCTGTCCGATAGGTGCTGATCATCCAAACAATGTCAGATTTTCTATCG
CATGGGTTTCAATGACCAAGAAATCGTAGCCCTTTCCGGTGCTCATGCTCTTGGCCGCTGCCACGTTGACCGCGGTAAGATAGTTCCATGGGCTCAGGGCTGTGTAAGTTTTCAACCCGG
TATGATCTAGATCTGGGTTCCAAGGACCTTGGACATTTTCGCCAACGACGTTCACGAACGACTACTTTAAGCTTCTTTTCAATGAGAAAAGTACGTCTTATGGAGTGTCTTGCGCCCATC
CGATGCTAATTGGATTATCGCAGGTGGGTGTGGAGGAGCTGGAATGGACCCAAACAACTTGAGGATAAGAAGACCAGATCTCTGATGATGCTGCCCCGTTCGTCTCTTTAAATCCTAACT
GGGGCTGGGCTGATGCATGAATCCTCCAGAACGGACTACGTTCTTACCCAGGACAAGAGTTTCCAGAAGTACGCCAAGGCCTATGCTGAAGACAACGAGCTATTCTTCAAGGAGAGTGCG
TCGTATCATTTGTTTGGAAATGCATAGTTCACATAACTCATGTCTCCTCAGCTTCGCTTCTGCCTTTTCTAGACTCCTCGAGCTTGGTGTTCCCACTCAACAGTTCGTGGCGGCTGAGCC
TTGGATAATGGGTGACGAGGCGTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTTTACTGCAGCTTTCCGTGTTCCTGTACGCAGGGCTGTCTTCTCCACTTCGTTCAGGAGGGCAGCCACCGAGGTCAGGGCGAATTCGTTCAGGAAATTCTCGACCGAGGTTCCC
CCTCCTGCTCCCAAGTCAAACACCGCTCTCTATGCCGGACTCGGAGCTATTGCGTTCGGTGGTGTAGCTTACTATTTGTATACCTCTTCTTCCGACACTGCAAAGGAGGCGTCCACAACT
GTCAAGTCTGCTGCTCAGACCGCGAAGGTTGCTACCAAGTTCACGCCTACCAAGGCGGACTACCAAAAGGTGTACAATCGCATCGCAGAGGTTATTGACGACGCTAGTGATTACGATGAT
GGCTCTTATGGCCCCGTCCTTCTCCGTCTTGCATGGCACGCCTCTGGCACGTATGATAAGAACACGGGTACCGGTGGAAGCAACTACGCCACGATGCGCTTCGAGCCAGAGGCTCTACAC
GGAGCCAACGCGGGTCTGCATGTAGCCCGCGGCCTCATGGAAAAAGTCAAGAAGGAGTTCGACTGGATTTCTTACGGTGATCTGTGGACTCTTGCCGGTGTTTGTGCCGTCCAGGAGATG
GCTGGCCCAAAGATCCCTTGGCGCCCTGGACGTATTGATGGCTTCGTGACCCACGTGACTCCTGATGGGCGTCTCCCTGATGCCACCCAGGGCGCACCACACATTCGGGATATTTTCTAT
CGCATGGGTTTCAATGACCAAGAAATCGTAGCCCTTTCCGGTGCTCATGCTCTTGGCCGCTGCCACGTTGACCGATCTGGGTTCCAAGGACCTTGGACATTTTCGCCAACGACGTTCACG
AACGACTACTTTAAGCTTCTTTTCAATGAGAAGTGGGTGTGGAGGAGCTGGAATGGACCCAAACAACTTGAGGATAAGAAGACCAGATCTCTGATGATGCTGCCAACGGACTACGTTCTT
ACCCAGGACAAGAGTTTCCAGAAGTACGCCAAGGCCTATGCTGAAGACAACGAGCTATTCTTCAAGGACTTCGCTTCTGCCTTTTCTAGACTCCTCGAGCTTGGTGTTCCCACTCAACAG
TTCGTGGCGGCTGAGCCTTGGATAATGGGTGACGAGGCGTAG

Retrieve as FASTA