Entry information : PsiPrx02
Entry ID 1174
Creation 2008-12-02 (Christophe Dunand)
Last sequence changes 2008-12-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-21 (Christophe Dunand)
Peroxidase information: PsiPrx02
Name PsiPrx02
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea sitchensis (Sitka spruce)    [TaxId: 3332 ]
Cellular localisation N/D
Tissue types Roots
Shoots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PsiPrx02
start..stop
S start..stop
PgPrx06 681 0 1..333 1..333
PabPrx93 681 0 1..333 1..333
PpPrx04 651 0 1..333 1..333
PtaPrx54 644 0 1..333 1..333
Literature and cross-references PsiPrx02
Literature Ralph et al., The spruce transcriptome: Analysis of ca. 6,500 sequence-verified full-length cDNAs.
Protein ref. GenBank:   ABK21900.1
EST ref. GenBank:   EF082543
Cluster/Prediction ref. UniGene:   Psi.3927
Protein sequence: PsiPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333 (302)
PWM (Da):   %s   35928.04 (32715.3)  
PI (pH):   %s   8.48 (7.68) Peptide Signal:   %s   cut: 32 range:32-333
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSKKSARKP LELAGFVVWV LLGLCVSKGS AQLKENFYAK ICPNVESIVR NAVSQKFSQT FVTVPGTLRL FFHDCFVEGC DASVIIQSTS NNTAEKDFSD NLSLAGDGFD TVVKAKQAVE  KVCPNTVSCA DILTMAARDV VALAGGPQFN VELGRRDGLI SQASRVSGNL PKASFTLNQL NFLFASKGLS QTDMVALSGA HTLGFSHCNQ ISNRIYSFSA STPVDPSLNP SYATQLQQMC 
PKNVDPTIAI NIDPTTPRQF DNVYYQNLQS GKGLFSSDEV LYTDLRTRNA VNTFAQSSGA FNTAFVNAMR NLGRVGVKTG FQGEIRQDCS RFN 

Retrieve as FASTA  
Remarks Complete sequence from mRNA and 2 ESTs. Cultivar="FB3-425".
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTCCA AGAAATCTGC TAGGAAGCCA TTGGAGTTGG CTGGATTTGT CGTTTGGGTG TTGTTGGGAC TGTGTGTAAG CAAAGGATCA GCTCAACTTA AAGAGAATTT TTATGCAAAA  ATCTGTCCCA ATGTTGAATC CATTGTAAGG AATGCTGTTT CTCAAAAGTT CAGCCAGACG TTTGTGACAG TTCCTGGCAC ATTACGGCTC TTCTTCCATG ATTGCTTTGT TGAGGGATGT  GATGCCTCTG TGATTATTCA GTCTACTTCA AACAACACTG CTGAGAAAGA TTTTTCAGAC AACTTGTCAT TAGCTGGTGA TGGATTTGAT ACTGTCGTCA AGGCCAAGCA AGCTGTAGAA  AAAGTGTGCC CCAACACAGT GTCTTGTGCT GATATCTTAA CCATGGCTGC CAGAGATGTT GTAGCATTGG CTGGAGGCCC ACAATTCAAT GTGGAGTTAG GACGACGAGA TGGACTGATA  TCCCAAGCCT CCAGAGTCAG TGGAAACCTA CCAAAGGCTT CATTCACTCT CAACCAACTA AACTTTCTAT TTGCAAGCAA GGGTTTGAGT CAGACAGACA TGGTAGCTCT ATCTGGAGCC  CACACTCTGG GATTCTCTCA CTGCAACCAA ATCTCAAATA GAATATACAG TTTCAGTGCT AGTACACCCG TGGATCCAAG TCTGAATCCT TCCTATGCCA CTCAACTCCA ACAGATGTGC  CCGAAGAACG TGGATCCGAC CATTGCCATC AACATAGATC CCACAACTCC CCGTCAATTC GATAACGTCT ATTACCAGAA TTTGCAGTCT GGGAAGGGAC TTTTCTCGTC TGACGAGGTT  CTATACACAG ATCTGCGCAC ACGAAACGCA GTAAACACAT TTGCTCAGAG TTCAGGTGCG TTTAATACGG CCTTCGTGAA CGCCATGAGA AACTTGGGCC GTGTGGGTGT TAAGACAGGA 
TTCCAGGGCG AGATCAGACA AGATTGCAGC CGCTTTAACT AA 

Retrieve as FASTA