Entry information : GaPrx17
Entry ID 1175
Creation 2008-12-01 (Christophe Dunand)
Last sequence changes 2012-05-07 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-07 (Christophe Dunand)
Peroxidase information: GaPrx17
Name GaPrx17
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium
Organism Gossypium arboreum    [TaxId: 29729 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GaPrx17
start..stop
S start..stop
GaPrx10 169 5e-53 1..150 183..331
GhPrx14 169 9e-53 1..150 183..331
CsPrx39 118 2e-33 1..150 184..331
PtPrx79 109 6e-30 1..150 183..330
Literature and cross-references GaPrx17
Literature Wing,R.A. et al., unpublished
Protein sequence: GaPrx17
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   150
PWM (Da):   %s   16955.01  
PI (pH):   %s   11.28
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
KGLSFKIFFN TKRGVNTKSQ APGKASRYGF PQAPQGKIRA VLTSPNHFLR KKVSQKFPAG GSRKSNPVSK DPETSFAFDN QF*GDLLAPK GLVQANFVFL EDGRSRKQVE EFANNKKRFF 
RSWGKSFLKL PPLEVKPDNE GEIRQSWPFT K* 

Retrieve as FASTA  
Remarks Partial sequence from singleton. 5'end is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAGGGTTTGT CTTTTAAAAT TTTTTTTAAC ACCAAACGGG GGGTCAACAC AAAAAGCCAG GCCCCAGGGA AGGCTTCCAG GTATGGGTTC CCCCAGGCCC CCCAGGGAAA GATCAGGGCG  GTGTTAACAT CCCCTAACCA TTTCCTACGG AAAAAGGTCA GCCAAAAGTT TCCAGCCGGG GGAAGTAGGA AATCCAACCC CGTCAGCAAG GATCCCGAGA CATCCTTTGC ATTTGACAAT  CAGTTTTAAG GGGACCTATT AGCCCCCAAA GGGTTGGTTC AGGCAAATTT TGTTTTCTTA GAGGATGGAA GATCTAGGAA ACAAGTAGAG GAGTTTGCAA ATAATAAAAA AAGGTTTTTC 
CGGAGTTGGG GAAAGTCATT TTTGAAGCTC CCCCCCCTTG AAGTGAAGCC AGATAATGAA GGGGAAATCC GCCAGTCTTG GCCCTTTACA AAATAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAGGGTTTGT CTTTTAAAAT TTTTTTTAAC ACCAAACGGG GGGTCAACAC AAAAAGCCAG GCCCCAGGGA AGGCTTCCAG GTATGGGTTC CCCCAGGCCC CCCAGGGAAA GATCAGGGCG  GTGTTAACAT CCCCTAACCA TTTCCTACGG AAAAAGGTCA GCCAAAAGTT TCCAGCCGGG GGAAGTAGGA AATCCAACCC CGTCAGCAAG GATCCCGAGA CATCCTTTGC ATTTGACAAT  CAGTTTTAAG GGGACCTATT AGCCCCCAAA GGGTTGGTTC AGGCAAATTT TGTTTTCTTA GAGGATGGAA GATCTAGGAA ACAAGTAGAG GAGTTTGCAA ATAATAAAAA AAGGTTTTTC 
CGGAGTTGGG GAAAGTCATT TTTGAAGCTC CCCCCCCTTG AAGTGAAGCC AGATAATGAA GGGGAAATCC GCCAGTCTTG GCCCTTTACA AAATAA 

Retrieve as FASTA