Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
291 |
PWM (Da): |
32493.68 |
|
PI (pH):
| 10.16 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MKLESPRRPISSFGPRALHHPMPPSYNPCLMLRRVPRPRLAPGPALTNTDCVLHPTAGPAAHCRHLRHLHNQSQSQSQPQPRPRPRQPPAVPSSTTFPLRPRSPLRPTPSPFCIAHSPFATMASATSFYDFKPVDKRGEPKPLDEYKGKVVLVVNTASKCGFTPQFEGLEKLYQGLKEKHPDDFVILGFPCNQFGGQDPGSNDEIQSFCQVNYGVTFPVLGKIDVNGDKADPLYEWLKNEQPGLMGLKRIKWNFEKFLIGRDGKVKGRWASTTKPESLEKPILEQLNNKE* |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (1 intron). Incorrect prediction from JGI (large 5'end is missing). |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAACTCGAGTCCCCTCGTCGTCCCATCTCATCTTTTGGCCCCCGAGCCTTGCACCACCCAATGCCGCCGTCGTACAATCCCTGCCTCATGCTGAGGCGAGTCCCTAGGCCAAGACTG GCTCCCGGCCCTGCCCTTACAAATACCGATTGCGTCTTGCACCCTACCGCTGGCCCGGCTGCGCACTGCCGCCACCTCCGACATCTTCATAATCAATCTCAGAGTCAATCTCAACCTCAA CCTCGACCTCGACCGCGACAACCTCCTGCAGTTCCATCATCCACCACCTTCCCACTGCGACCAAGATCCCCCTTGCGTCCCACACCATCTCCCTTCTGCATCGCACACTCGCCCTTCGCA ACCATGGCGTCAGCAACATCCTTTTACGACTTCAAGCCCGTCGACAGTAAGCTCTGCCCTTGATCCCAAAACCAATCCTCGTCTGCACCCCTTCAAAAATAATCATGTTCCCCCATGCGG CCATCGCCCTCGCATAAGCGGCGGCGCATCTTTCTGCAACGCCGATGGCGTCTGTATGCACAACTGCCGTCTTCCTTCCCTATTTGAACCTCGCGCCCTGCCCGGCACTTGCAGCTGCCC TTTCTGTCCTTCACTGCACCGCACGCACCTCATCCCCCCATCATCACTACCACCGCGGCAAGCATCATCGTGGCAGTTGCAAAAGAGCCTGACTGACAATCCGTGACCCCCACCTATAGA GCGCGGCGAGCCCAAGCCCCTTGACGAGTACAAGGGCAAGGTCGTTCTGGTCGTCAACACCGCTTCCAAGTGTGGCTTCACCCCCCAGTTCGAGGGCCTCGAGAAGCTTTACCAGGGCCT CAAGGAGAAACACCCTGACGACTTCGTCATTCTTGGCTTCCCTTGCAACCAGTTCGGTGGCCAGGATCCCGGTTCGAACGACGAGATCCAGAGCTTCTGCCAGGTCAATTATGGCGTGAC CTTCCCGGTCCTTGGCAAGATCGACGTCAACGGCGACAAGGCCGACCCCCTCTACGAGTGGCTTAAGAATGAGCAGCCCGGTCTCATGGGCCTCAAGAGGATCAAGTGGAACTTTGAGAA GTTCCTCATCGGCCGCGACGGCAAGGTCAAGGGCCGCTGGGCCAGCACCACCAAGCCCGAGAGCCTGGAGAAGCCCATTCTCGAGCAGCTCAACAACAAGGAG |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAAACTCGAGTCCCCTCGTCGTCCCATCTCATCTTTTGGCCCCCGAGCCTTGCACCACCCAATGCCGCCGTCGTACAATCCCTGCCTCATGCTGAGGCGAGTCCCTAGGCCAAGACTG GCTCCCGGCCCTGCCCTTACAAATACCGATTGCGTCTTGCACCCTACCGCTGGCCCGGCTGCGCACTGCCGCCACCTCCGACATCTTCATAATCAATCTCAGAGTCAATCTCAACCTCAA CCTCGACCTCGACCGCGACAACCTCCTGCAGTTCCATCATCCACCACCTTCCCACTGCGACCAAGATCCCCCTTGCGTCCCACACCATCTCCCTTCTGCATCGCACACTCGCCCTTCGCA ACCATGGCGTCAGCAACATCCTTTTACGACTTCAAGCCCGTCGACAAGCGCGGCGAGCCCAAGCCCCTTGACGAGTACAAGGGCAAGGTCGTTCTGGTCGTCAACACCGCTTCCAAGTGT GGCTTCACCCCCCAGTTCGAGGGCCTCGAGAAGCTTTACCAGGGCCTCAAGGAGAAACACCCTGACGACTTCGTCATTCTTGGCTTCCCTTGCAACCAGTTCGGTGGCCAGGATCCCGGT TCGAACGACGAGATCCAGAGCTTCTGCCAGGTCAATTATGGCGTGACCTTCCCGGTCCTTGGCAAGATCGACGTCAACGGCGACAAGGCCGACCCCCTCTACGAGTGGCTTAAGAATGAG CAGCCCGGTCTCATGGGCCTCAAGAGGATCAAGTGGAACTTTGAGAAGTTCCTCATCGGCCGCGACGGCAAGGTCAAGGGCCGCTGGGCCAGCACCACCAAGCCCGAGAGCCTGGAGAAG CCCATTCTCGAGCAGCTCAACAACAAGGAG |
Retrieve as FASTA
|
|