Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
192 |
PWM (Da): |
21825.01 |
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PI (pH):
| 8.42 |
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Sequence 234
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MFQYTKSFSLFNLGRFLTPTVSSSLSTPSRLMSDSGFYSLKAELPGGKEYYFSELRGKAVLIVNVASKCGFTPQYKGLQDLYLKYKDQNFVILGFPCNQFGGQEPEDDKGIEEFCKLNHGVTFPLMKKSDVNGDNTNEVYKWLKQEKSGMFGLTRIKWNFEKFLVDKEGNVVQRWASTTTPQAIDEEVAKLL* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns). Incorrect prediction from JGI (5' end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTTTCAATATACTAAGTCTTTCTCACTATTTAACCTGGGGCGGTTCTTGACTCCCACAGTCTCGTCTTCTCTTTCCACCCCTAGCCGCCTCATGTCAGATTCTGGATTTTACTCTCTC AAGGCGGAGCTTCCTGGAGGCAAGGAGTATTATTTCTCCGAACTGAGAGGAAAGGCTGTGCTCATCGTCAACGTTGCTTCAAAGTGGTGCGTCTACCACTAATGCAAAAGTTCTTTAAGC TTACGACGTCTTTCAGCGGGTTCACTCCGCAATACAAGGGACTGCAGGATTTGTACTTGAAGTACAAGGATCAGAACTTTGTTATCCTTGGATTCCCTTGTAACCAGGTAAGCATAACCG ACTTTCCTCCGGTCTATCTCCCGAATGACGTCATCGCCTGAGTAGTTTGGAGGTCAAGAGCCAGAAGACGACAAGGGAATCGAAGAGTTTTGCAAGCTCAACCACGGCGTCACATTCCCA CTTATGAAAAAGTCCGATGTCAATGGTGACAATACCAACGAGGTCTACAAGTGGCTGAAGCAAGAGAAATCTGGGATGTTTGGGCTCACGAGAATCAAGGTGAGTACCTTGTGACACTAC AATTGAGGTCAAGACACTCAAGATACGAAAAGTGGAACTTCGAAAAGTTCCTCGTCGACAAAGAAGGGAACGTCGTTCAACGATGGGCGTCCACGACGACACCACAGGCGATTGACGAGG AAGTTGCGAAACTCCTATGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTTTCAATATACTAAGTCTTTCTCACTATTTAACCTGGGGCGGTTCTTGACTCCCACAGTCTCGTCTTCTCTTTCCACCCCTAGCCGCCTCATGTCAGATTCTGGATTTTACTCTCTC AAGGCGGAGCTTCCTGGAGGCAAGGAGTATTATTTCTCCGAACTGAGAGGAAAGGCTGTGCTCATCGTCAACGTTGCTTCAAAGTGCGGGTTCACTCCGCAATACAAGGGACTGCAGGAT TTGTACTTGAAGTACAAGGATCAGAACTTTGTTATCCTTGGATTCCCTTGTAACCAGTTTGGAGGTCAAGAGCCAGAAGACGACAAGGGAATCGAAGAGTTTTGCAAGCTCAACCACGGC GTCACATTCCCACTTATGAAAAAGTCCGATGTCAATGGTGACAATACCAACGAGGTCTACAAGTGGCTGAAGCAAGAGAAATCTGGGATGTTTGGGCTCACGAGAATCAAGTGGAACTTC GAAAAGTTCCTCGTCGACAAAGAAGGGAACGTCGTTCAACGATGGGCGTCCACGACGACACCACAGGCGATTGACGAGGAAGTTGCGAAACTCCTATGA |
Retrieve as FASTA
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