Entry information : PcriGPx01
Entry ID 11776
Creation 2013-04-23 (Christophe Dunand)
Last sequence changes 2013-04-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-22 (Catherine Mathe (Scipio))
Peroxidase information: PcriGPx01
Name PcriGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Plicaturopsis
Organism Plicaturopsis crispa    [TaxId: 139390 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcriGPx01
start..stop
S start..stop
PstrGPx01 310 3.6e-108 52..229 80..254
GtraGPx01 293 6.57e-102 1..230 1..221
GsppGPx01 290 1.54e-100 35..230 39..234
NlepGPx01 289 2.39e-100 1..230 1..217
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11776' 'join(451070..451389,451450..451469,451509..451576,451639..451737,451794..451868,451926..451975,452035..452089)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 451070..451389 318 N° 2 451450..451469 18 N° 3 451509..451576 66 N° 4 451639..451737 97
N° 5 451794..451868 73 N° 6 451926..451975 48 N° 7 452035..452089 53  
join(451070..451389,451450..451469,451509..451576,451639..451737,451794..451868, 451926..451975,452035..452089)


exon

Literature and cross-references PcriGPx01
DNA ref. JGI genome:   scaffold_15 (451070..452089)
Cluster/Prediction ref. JGI gene:   31959 [Incorrect prediction]
Protein sequence: PcriGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   229
PWM (Da):   %s   25827.25 Transmb domain:   %s   o338-357i478-500o520-542i702-719o
PI (pH):   %s   10.03
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSRRFSKSLQLPNNRYRTTNLGLRSLYNRVFLASRPFSFSAFSPSLCKPRSHLNTPFSRTFVTESNMGFYDLKAEQPGGKTFAFEELKGKVVLIVNTASACGFTPQYKGTRIHSLQALYD
KYKEKGFVILGFPCNQFGGQEPGDDNAISEFCTLNHGVTFPLMKKSDVNGDNTNEVYKWLKAEKSGLLGLTRIKWNFEKFLIDKEGKVVHRWASTTSPEAIDAEVAKLL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns). Incorrect prediction from JGI (5'end is missing).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCACGACGTTTCTCAAAGTCTTTGCAATTGCCGAACAACCGGTATCGCACCACAAACCTCGGTTTACGATCTCTTTATAACCGTGTATTTCTCGCAAGCAGACCGTTCAGTTTCTCT
GCGTTTTCCCCTTCACTTTGCAAGCCGCGTTCGCATCTAAACACACCGTTTTCACGCACCTTCGTAACCGAGTCCAATATGGGTTTCTACGATCTTAAAGCCGAGCAGCCAGGGGGCAAG
ACCTTTGCATTCGAGGAGCTCAAGGGCAAGGTTGTTCTGATCGTGAACACCGCGTCTGCTTGCGGTTTCACACCCCAATA
TAGTACGCAGACTCTCCTTTGATCGTATCGTCCCGGAACT
AACTGACGACCTTGGCGAGCAGCAAAGGTACAAGAATACATATAGTACGCAGATCTAGGATACTCACTTACGAATGTCGTCAGGTCTGCAGGCTCTGTATGACAAGTACAAGGAAAAGGG
GTTCGTTATCCTCGGATTCCCTTGCAACCAG
AGGTGCGGCACCTAGCGATTTCTCGTCCTTGTGTCAATACTCACACGACATGCATATGATTCAGTTCGGTGGACAGGAGCCCGGTGACG
ACAACGCCATCAGCGAATTCTGCACATTGAACCACGGTGTCACTTTCCCGCTGATGAAGAAGTCGGATGTCAAC
ACGTGAGTGTATTTCTGGCTCTGCGCTGCCGCTACATTTGTTGACC
GGGTCCTCTTAGGGTGATAACACCAACGAGGTGTACAAGTGGCTTAAGGCTGAGAAATCTGGCCTCCTCGGGCTCACCAGAATCAAGAGGTACGTCTCGTCCTCTATTGCGTTCTCAGTC
GGCTAATAACACACCTTGTTTTGCAGTGGAATTTCGAGAAATTCCTCATCGACAAGGAGGGCAAGGTCGTACACCGCGGTAATTACGTTTTGCTAAGATCAGCGCATCGGCCACTGCTGA
CAACCTACTTTCTATAGCTGGGCATCCACCACCAGTCCCGAGGCCATCGATGCTGAGGTCGCGAAGCTGCTA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCACGACGTTTCTCAAAGTCTTTGCAATTGCCGAACAACCGGTATCGCACCACAAACCTCGGTTTACGATCTCTTTATAACCGTGTATTTCTCGCAAGCAGACCGTTCAGTTTCTCT
GCGTTTTCCCCTTCACTTTGCAAGCCGCGTTCGCATCTAAACACACCGTTTTCACGCACCTTCGTAACCGAGTCCAATATGGGTTTCTACGATCTTAAAGCCGAGCAGCCAGGGGGCAAG
ACCTTTGCATTCGAGGAGCTCAAGGGCAAGGTTGTTCTGATCGTGAACACCGCGTCTGCTTGCGGTTTCACACCCCAATA
CAAAGGTACAAGAATACATAGTCTGCAGGCTCTGTATGAC
AAGTACAAGGAAAAGGGGTTCGTTATCCTCGGATTCCCTTGCAACCAG
TTCGGTGGACAGGAGCCCGGTGACGACAACGCCATCAGCGAATTCTGCACATTGAACCACGGTGTCACTTTC
CCGCTGATGAAGAAGTCGGATGTCAAC
GGTGATAACACCAACGAGGTGTACAAGTGGCTTAAGGCTGAGAAATCTGGCCTCCTCGGGCTCACCAGAATCAAGTGGAATTTCGAGAAATTC
CTCATCGACAAGGAGGGCAAGGTCGTACACCG
CTGGGCATCCACCACCAGTCCCGAGGCCATCGATGCTGAGGTCGCGAAGCTGCTA

Retrieve as FASTA