Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
229 |
PWM (Da): |
25827.25 |
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PI (pH):
| 10.03 |
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Sequence 271
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MSRRFSKSLQLPNNRYRTTNLGLRSLYNRVFLASRPFSFSAFSPSLCKPRSHLNTPFSRTFVTESNMGFYDLKAEQPGGKTFAFEELKGKVVLIVNTASACGFTPQYKGTRIHSLQALYDKYKEKGFVILGFPCNQFGGQEPGDDNAISEFCTLNHGVTFPLMKKSDVNGDNTNEVYKWLKAEKSGLLGLTRIKWNFEKFLIDKEGKVVHRWASTTSPEAIDAEVAKLL* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (6 introns). Incorrect prediction from JGI (5'end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCACGACGTTTCTCAAAGTCTTTGCAATTGCCGAACAACCGGTATCGCACCACAAACCTCGGTTTACGATCTCTTTATAACCGTGTATTTCTCGCAAGCAGACCGTTCAGTTTCTCT GCGTTTTCCCCTTCACTTTGCAAGCCGCGTTCGCATCTAAACACACCGTTTTCACGCACCTTCGTAACCGAGTCCAATATGGGTTTCTACGATCTTAAAGCCGAGCAGCCAGGGGGCAAG ACCTTTGCATTCGAGGAGCTCAAGGGCAAGGTTGTTCTGATCGTGAACACCGCGTCTGCTTGCGGTTTCACACCCCAATAGTACGCAGACTCTCCTTTGATCGTATCGTCCCGGAACTAA CTGACGACCTTGGCGAGCAGCAAAGGTACAAGAATACATAGTACGCAGATCTAGGATACTCACTTACGAATGTCGTCAGGTCTGCAGGCTCTGTATGACAAGTACAAGGAAAAGGGGTTC GTTATCCTCGGATTCCCTTGCAACCAGGTGCGGCACCTAGCGATTTCTCGTCCTTGTGTCAATACTCACACGACATGCATATGATTCAGTTCGGTGGACAGGAGCCCGGTGACGACAACG CCATCAGCGAATTCTGCACATTGAACCACGGTGTCACTTTCCCGCTGATGAAGAAGTCGGATGTCAACGTGAGTGTATTTCTGGCTCTGCGCTGCCGCTACATTTGTTGACCGGGTCCTC TTAGGGTGATAACACCAACGAGGTGTACAAGTGGCTTAAGGCTGAGAAATCTGGCCTCCTCGGGCTCACCAGAATCAAGGTACGTCTCGTCCTCTATTGCGTTCTCAGTCGGCTAATAAC ACACCTTGTTTTGCAGTGGAATTTCGAGAAATTCCTCATCGACAAGGAGGGCAAGGTCGTACACCGGTAATTACGTTTTGCTAAGATCAGCGCATCGGCCACTGCTGACAACCTACTTTC TATAGCTGGGCATCCACCACCAGTCCCGAGGCCATCGATGCTGAGGTCGCGAAGCTGCTA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCACGACGTTTCTCAAAGTCTTTGCAATTGCCGAACAACCGGTATCGCACCACAAACCTCGGTTTACGATCTCTTTATAACCGTGTATTTCTCGCAAGCAGACCGTTCAGTTTCTCT GCGTTTTCCCCTTCACTTTGCAAGCCGCGTTCGCATCTAAACACACCGTTTTCACGCACCTTCGTAACCGAGTCCAATATGGGTTTCTACGATCTTAAAGCCGAGCAGCCAGGGGGCAAG ACCTTTGCATTCGAGGAGCTCAAGGGCAAGGTTGTTCTGATCGTGAACACCGCGTCTGCTTGCGGTTTCACACCCCAATACAAAGGTACAAGAATACATAGTCTGCAGGCTCTGTATGAC AAGTACAAGGAAAAGGGGTTCGTTATCCTCGGATTCCCTTGCAACCAGTTCGGTGGACAGGAGCCCGGTGACGACAACGCCATCAGCGAATTCTGCACATTGAACCACGGTGTCACTTTC CCGCTGATGAAGAAGTCGGATGTCAACGGTGATAACACCAACGAGGTGTACAAGTGGCTTAAGGCTGAGAAATCTGGCCTCCTCGGGCTCACCAGAATCAAGTGGAATTTCGAGAAATTC CTCATCGACAAGGAGGGCAAGGTCGTACACCGCTGGGCATCCACCACCAGTCCCGAGGCCATCGATGCTGAGGTCGCGAAGCTGCTA |
Retrieve as FASTA
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