Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
162 |
PWM (Da): |
18262.32 |
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PI (pH):
| 6.68 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MNAPDFYSLSSLDAKKNEVSFEQFKGKVVLIVNVASKCGFTPQYDGLEKLYQTHKDQGLVILGFPSNQFGSQEPGTEEEITSFCRLNYGVTFPIMAKTDVNGDHEHPVYHWLKSQKSGLLGLTRIKWNFEKFLINKEGQVVHRYSSLTKPEDIEKDIVALL* |
Retrieve as FASTA
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Remarks |
complete sequence from genomic (4 introns). Incorrect prediction from Broad (extra first intron and very short first exon). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAATGCACCAGACTTCTACTCGCTCTCGTCGCTCGACGCCAAGAAGAACGAGGTCTCGTTCGAGCAGTTCAAGGGCAAGGTCGTGCTCATTGTCAACGTTGCCAGCAAGTGCGGCTTC ACGCCCCAGTACGATGGTGCGTCGCATGCTGCCTCGTCGACCGCACCAGACCGTCGCTGACCTGACCACCAACTCGATCAGGTCTCGAGAAGCTCTACCAGACGCACAAGGACCAGGGCC TCGTGATTCTCGGCTTCCCGTCGAACCAGTTTGGCTCGCAGGAGCCCGGCACCGAGGAGGAGATCACGAGCTTCTGCCGGTGCGCACTGGCGGCCTGGTCGCGTTCACTTGGCCGTTCCC TCAACTGACGGACCTCGTTCCGCACTAGCCTGAACTACGGCGTCACGTTCCCGATCATGGCCAAGACCGACGTCAACGGCGACCACGAGCACCCCGTCTACCACTGGCTCAAGAGCCAGA AATCGGGTCTCCTCGGTCTGACGCGCATCAAGTACGTGCCGCGCGCGCATTCTCGCCGCTTCGATTGATCTGCGCTGACGCTGTTCGTCGGTCTAGGTGGAACTTTGAGAAGTTCCTCAT CAACAAGGAGGGCCAGGTCGTGCACCGCTACTCGTCGCTCACCAAGCCCGAGGACATTGAGAAGGACATTGTCGCCCTGCTGTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAATGCACCAGACTTCTACTCGCTCTCGTCGCTCGACGCCAAGAAGAACGAGGTCTCGTTCGAGCAGTTCAAGGGCAAGGTCGTGCTCATTGTCAACGTTGCCAGCAAGTGCGGCTTC ACGCCCCAGTACGATGGTCTCGAGAAGCTCTACCAGACGCACAAGGACCAGGGCCTCGTGATTCTCGGCTTCCCGTCGAACCAGTTTGGCTCGCAGGAGCCCGGCACCGAGGAGGAGATC ACGAGCTTCTGCCGCCTGAACTACGGCGTCACGTTCCCGATCATGGCCAAGACCGACGTCAACGGCGACCACGAGCACCCCGTCTACCACTGGCTCAAGAGCCAGAAATCGGGTCTCCTC GGTCTGACGCGCATCAAGTGGAACTTTGAGAAGTTCCTCATCAACAAGGAGGGCCAGGTCGTGCACCGCTACTCGTCGCTCACCAAGCCCGAGGACATTGAGAAGGACATTGTCGCCCTG CTGTAA |
Retrieve as FASTA
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