Entry information : RnoKat
Entry ID 11811
Creation 2013-04-25 (Marcel Zamocky)
Last sequence changes 2013-04-26 (Marcel Zamocky)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-04-26 (Marcel Zamocky)
Peroxidase information: RnoKat
Name RnoKat
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Muridae Rattus
Organism Rattus norvegicus (Norway rat)    [TaxId: 10116 ]
Cellular localisation Peroxisomal
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RnoKat
start..stop
S start..stop
MmKat01 1061 0 1..527 1..527
CfaKat01 1032 0 1..527 1..527
BtKat01 1020 0 1..527 1..527
SscKat01 1014 0 1..527 1..527
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 30..1613 1584  
join(30..1613)


exon

Literature and cross-references RnoKat
Literature Furuta S., Hayashi H., Hijikata M., Miyazawa S., Osumi T., Hashimoto T. (1986) Complete nucleotide sequence of cDNA and deduced amino acid sequence of rat liver catalase. Proc. Natl. Acad. Sci. USA 83:313-317.
Protein ref. UniProtKB:   P04762
DNA ref. GenBank:   AC_000071.1 (88943343..88911243)
mRNA ref. GenBank:   BC081853
Protein sequence: RnoKat
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   527
PWM (Da):   %s   59606.41  
PI (pH):   %s   7.54
Sequence
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Send to Peroxiscan
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MADSRDPASD QMKQWKEQRA PQKPDVLTTG GGNPIGDKLN IMTAGPRGPL LVQDVVFTDE MAHFDRERIP ERVVHAKGAG AFGYFEVTHD ITRYSKAKVF EHIGKRTPIA VRFSTVAGES  GSADTVRDPR GFAVKFYTED GNWDLVGNNT PIFFIRDAML FPSFIHSQKR NPQTHLKDPD MVWDFWSLCP ESLHQVTFLF SDRGIPDGHR HMNGYGSHTF KLVNANGEAV YCKFHYKTDQ  GIKNLPVEEA GRLAQEDPDY GLRDLFNAIA SGNYPSWTFY IQVMTFKEAE TFPFNPFDLT KVWPHKDYPL IPVGKLVLNR NPANYFAEVE QMAFDPSNMP PGIEPSPDKM LQGRLFAYPD  THRHRLGPNY LQIPVNCPYR ARVANYQRDG PMCMHDNQGG APNYYPNSFS APEQQGSALE HHSQCSADVK RFNSANEDNV TQVRTFYTKV LNEEERKRLC ENIANHLKDA QLFIQRKAVK 
NFTDVHPDYG ARVQALLDQY NSQKPKNAIH TYVQAGSHIA AKGKANL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromosome 3, 12 introns) and mRNA. Strain="BN"
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGACA GCCGGGACCC AGCCAGCGAC CAGATGAAGC AGTGGAAGGA GCAGCGGGCC CCTCAGAAAC CCGATGTCCT GACCACCGGA GGCGGGAACC CAATAGGAGA TAAACTTAAT  ATCATGACTG CGGGGCCCCG AGGGCCCCTC CTCGTTCAAG ATGTGGTTTT CACCGACGAG ATGGCACACT TTGACAGAGA GCGGATTCCT GAGAGAGTGG TACATGCAAA GGGAGCAGGT  GCTTTTGGAT ACTTTGAGGT CACCCACGAT ATTACCAGAT ACTCCAAGGC AAAGGTGTTT GAGCATATTG GGAAGAGGAC TCCTATTGCC GTCCGATTCT CCACAGTCGC TGGAGAGTCA  GGCTCAGCTG ACACAGTTCG TGACCCTCGT GGGTTTGCAG TGAAATTCTA CACTGAAGAT GGTAACTGGG ACCTTGTGGG AAACAACACC CCTATTTTCT TCATCAGGGA TGCCATGTTG  TTTCCATCCT TTATCCATAG CCAGAAGAGA AACCCACAAA CTCACCTGAA GGACCCTGAC ATGGTCTGGG ACTTCTGGAG TCTTTGTCCA GAGTCTCTCC ATCAGGTTAC TTTCTTGTTC  AGCGACCGAG GGATTCCAGA TGGACATCGG CACATGAATG GCTATGGCTC ACACACCTTC AAGCTGGTTA ATGCGAATGG AGAGGCAGTG TACTGCAAGT TCCATTACAA GACTGACCAG  GGCATCAAAA ACTTGCCTGT TGAAGAGGCA GGAAGACTTG CACAGGAAGA CCCGGATTAT GGCCTCCGAG ATCTTTTCAA TGCCATCGCC AGTGGCAATT ACCCATCCTG GACTTTTTAC  ATCCAGGTCA TGACTTTCAA GGAGGCAGAA ACCTTCCCAT TTAATCCATT TGACCTGACC AAGGTTTGGC CTCACAAGGA CTACCCTCTT ATACCAGTTG GCAAACTGGT CTTAAACAGA  AATCCTGCTA ATTATTTTGC TGAAGTTGAA CAGATGGCTT TTGACCCAAG CAACATGCCC CCTGGCATTG AGCCCAGCCC GGACAAGATG CTCCAGGGCC GCCTTTTTGC TTACCCAGAC  ACTCACCGCC ACCGCCTGGG ACCAAACTAT CTGCAGATAC CTGTGAACTG TCCCTACCGT GCTCGCGTGG CCAACTACCA GCGCGATGGC CCCATGTGCA TGCATGACAA CCAGGGTGGT  GCTCCCAACT ACTACCCCAA CAGCTTCAGC GCACCAGAGC AGCAGGGCTC GGCCCTGGAG CACCATAGCC AGTGCTCTGC AGATGTGAAG CGCTTCAACA GTGCTAATGA AGACAACGTC  ACTCAGGTGC GGACATTCTA TACGAAGGTG TTGAATGAGG AGGAGAGGAA ACGCCTGTGT GAGAACATTG CCAACCACCT GAAAGATGCT CAGCTTTTCA TTCAGAGGAA AGCGGTCAAG  AATTTCACTG ACGTCCACCC TGACTACGGG GCCCGAGTCC AGGCTCTTCT GGACCAGTAC AACTCCCAGA AGCCTAAGAA TGCAATTCAC ACCTACGTAC AGGCCGGCTC TCACATAGCT 
GCCAAGGGAA AAGCTAACCT GTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGACA GCCGGGACCC AGCCAGCGAC CAGATGAAGC AGTGGAAGGA GCAGCGGGCC CCTCAGAAAC CCGATGTCCT GACCACCGGA GGCGGGAACC CAATAGGAGA TAAACTTAAT  ATCATGACTG CGGGGCCCCG AGGGCCCCTC CTCGTTCAAG ATGTGGTTTT CACCGACGAG ATGGCACACT TTGACAGAGA GCGGATTCCT GAGAGAGTGG TACATGCAAA GGGAGCAGGT  GCTTTTGGAT ACTTTGAGGT CACCCACGAT ATTACCAGAT ACTCCAAGGC AAAGGTGTTT GAGCATATTG GGAAGAGGAC TCCTATTGCC GTCCGATTCT CCACAGTCGC TGGAGAGTCA  GGCTCAGCTG ACACAGTTCG TGACCCTCGT GGGTTTGCAG TGAAATTCTA CACTGAAGAT GGTAACTGGG ACCTTGTGGG AAACAACACC CCTATTTTCT TCATCAGGGA TGCCATGTTG  TTTCCATCCT TTATCCATAG CCAGAAGAGA AACCCACAAA CTCACCTGAA GGACCCTGAC ATGGTCTGGG ACTTCTGGAG TCTTTGTCCA GAGTCTCTCC ATCAGGTTAC TTTCTTGTTC  AGCGACCGAG GGATTCCAGA TGGACATCGG CACATGAATG GCTATGGCTC ACACACCTTC AAGCTGGTTA ATGCGAATGG AGAGGCAGTG TACTGCAAGT TCCATTACAA GACTGACCAG  GGCATCAAAA ACTTGCCTGT TGAAGAGGCA GGAAGACTTG CACAGGAAGA CCCGGATTAT GGCCTCCGAG ATCTTTTCAA TGCCATCGCC AGTGGCAATT ACCCATCCTG GACTTTTTAC  ATCCAGGTCA TGACTTTCAA GGAGGCAGAA ACCTTCCCAT TTAATCCATT TGACCTGACC AAGGTTTGGC CTCACAAGGA CTACCCTCTT ATACCAGTTG GCAAACTGGT CTTAAACAGA  AATCCTGCTA ATTATTTTGC TGAAGTTGAA CAGATGGCTT TTGACCCAAG CAACATGCCC CCTGGCATTG AGCCCAGCCC GGACAAGATG CTCCAGGGCC GCCTTTTTGC TTACCCAGAC  ACTCACCGCC ACCGCCTGGG ACCAAACTAT CTGCAGATAC CTGTGAACTG TCCCTACCGT GCTCGCGTGG CCAACTACCA GCGCGATGGC CCCATGTGCA TGCATGACAA CCAGGGTGGT  GCTCCCAACT ACTACCCCAA CAGCTTCAGC GCACCAGAGC AGCAGGGCTC GGCCCTGGAG CACCATAGCC AGTGCTCTGC AGATGTGAAG CGCTTCAACA GTGCTAATGA AGACAACGTC  ACTCAGGTGC GGACATTCTA TACGAAGGTG TTGAATGAGG AGGAGAGGAA ACGCCTGTGT GAGAACATTG CCAACCACCT GAAAGATGCT CAGCTTTTCA TTCAGAGGAA AGCGGTCAAG  AATTTCACTG ACGTCCACCC TGACTACGGG GCCCGAGTCC AGGCTCTTCT GGACCAGTAC AACTCCCAGA AGCCTAAGAA TGCAATTCAC ACCTACGTAC AGGCCGGCTC TCACATAGCT 
GCCAAGGGAA AAGCTAACCT GTAA 

Retrieve as FASTA