Entry information : VdaCcP01
Entry ID 11867
Creation 2013-05-23 (Nizar Fawal)
Last sequence changes 2016-02-01 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-03 (Christophe Dunand)
Peroxidase information: VdaCcP01
Name VdaCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP001]
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Verticillium
Organism Verticillium dahliae    [TaxId: 27337 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VdaCcP01
start..stop
S start..stop
CgraCcP01 593 0 3..358 2..359
ChigCcP 584 0 3..360 2..361
CgloCcP01_ST23 584 0 3..360 2..361
CfioCcP01_MH18 576 0 3..360 2..363
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 400266..401354 1089  
complement(join(400266..401354))


exon

Literature and cross-references VdaCcP01
Cluster/Prediction ref. JGI gene:   8358
Protein sequence: VdaCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   362
PWM (Da):   %s   40167.02  
PI (pH):   %s   8.07
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAANTTRQFA RTALRSSTRT AFAAAPRQAF RQGHRFYSSE APKAAGPNWA LLSGLAVAGA GGAYLFTREG GVSAGSVPKV VNPTKKDYQD VYNEIASRLE EKDDYDDGSY GPVLVRLAWH  ASGTYDKETG TGGSNGATMR FAPEGDHGAN AGLQAARDFL APVKAKFPWI TYSDLWILGG VCALQEMQGP LIPYRPGRSD RDVSFCTPDG RLPDATKSHG HLRDIFYRMG FNDQEIVALS  GAHALGRCHT DRSGFSGPWT FSPTVLTNDY FRLLLEEKWQ WKKWDGPKQL EDKSTKTLMM LPTDYALIQD KEFLKTVKAY AKDNDLFFRD FSNVIVRLFE LGVPFQEGSE RWIMKPTWDE 
SP 

Retrieve as FASTA  
Remarks complete from genomics (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCCA ACACGACCCG TCAGTTCGCC CGCACGGCGC TGCGCTCCTC GACGCGTACC GCCTTCGCCG CTGCGCCCCG CCAGGCCTTC CGCCAGGGCC ACCGCTTCTA CTCTTCCGAG  GCCCCCAAGG CTGCCGGCCC CAACTGGGCT CTGCTGTCTG GCCTCGCCGT CGCCGGTGCC GGTGGCGCCT ACTTGTTCAC CCGCGAGGGC GGCGTCTCGG CGGGCTCGGT GCCCAAGGTC  GTCAACCCCA CCAAGAAGGA CTACCAGGAC GTCTACAACG AGATTGCCTC GCGCCTCGAG GAGAAGGACG ACTACGATGA CGGCAGCTAC GGCCCCGTCC TCGTGCGCCT CGCGTGGCAC  GCCAGCGGCA CCTACGACAA GGAGACGGGC ACGGGCGGCA GCAACGGCGC GACGATGCGC TTCGCCCCCG AGGGCGACCA CGGCGCCAAC GCCGGCCTCC AGGCGGCGCG CGACTTCCTC  GCGCCCGTCA AGGCCAAGTT CCCCTGGATC ACCTACTCGG ACCTCTGGAT CCTCGGCGGC GTCTGCGCCC TCCAGGAGAT GCAAGGGCCC CTCATCCCCT ACCGGCCCGG CCGCAGCGAC  CGCGACGTGT CCTTCTGCAC GCCCGACGGC CGCCTGCCCG ACGCCACCAA GTCGCACGGC CACCTGCGCG ACATTTTCTA CCGCATGGGC TTCAACGACC AGGAGATTGT CGCCCTCTCC  GGCGCCCACG CCCTCGGCCG CTGCCACACG GACCGCAGCG GCTTCTCCGG CCCCTGGACC TTCTCGCCCA CGGTGCTGAC CAACGACTAC TTCCGCCTGC TGCTCGAGGA GAAGTGGCAG  TGGAAGAAGT GGGACGGCCC CAAGCAGCTC GAGGACAAGT CGACCAAGAC GCTCATGATG CTGCCGACCG ACTATGCCCT CATCCAGGAC AAGGAATTCC TCAAGACGGT CAAGGCCTAC  GCCAAGGACA ACGACCTCTT CTTCAGGGAC TTCTCCAACG TCATTGTCCG CCTCTTTGAG CTCGGCGTGC CCTTCCAGGA GGGCTCCGAG CGCTGGATCA TGAAGCCCAC CTGGGACGAG 
TCGCCTTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCCA ACACGACCCG TCAGTTCGCC CGCACGGCGC TGCGCTCCTC GACGCGTACC GCCTTCGCCG CTGCGCCCCG CCAGGCCTTC CGCCAGGGCC ACCGCTTCTA CTCTTCCGAG  GCCCCCAAGG CTGCCGGCCC CAACTGGGCT CTGCTGTCTG GCCTCGCCGT CGCCGGTGCC GGTGGCGCCT ACTTGTTCAC CCGCGAGGGC GGCGTCTCGG CGGGCTCGGT GCCCAAGGTC  GTCAACCCCA CCAAGAAGGA CTACCAGGAC GTCTACAACG AGATTGCCTC GCGCCTCGAG GAGAAGGACG ACTACGATGA CGGCAGCTAC GGCCCCGTCC TCGTGCGCCT CGCGTGGCAC  GCCAGCGGCA CCTACGACAA GGAGACGGGC ACGGGCGGCA GCAACGGCGC GACGATGCGC TTCGCCCCCG AGGGCGACCA CGGCGCCAAC GCCGGCCTCC AGGCGGCGCG CGACTTCCTC  GCGCCCGTCA AGGCCAAGTT CCCCTGGATC ACCTACTCGG ACCTCTGGAT CCTCGGCGGC GTCTGCGCCC TCCAGGAGAT GCAAGGGCCC CTCATCCCCT ACCGGCCCGG CCGCAGCGAC  CGCGACGTGT CCTTCTGCAC GCCCGACGGC CGCCTGCCCG ACGCCACCAA GTCGCACGGC CACCTGCGCG ACATTTTCTA CCGCATGGGC TTCAACGACC AGGAGATTGT CGCCCTCTCC  GGCGCCCACG CCCTCGGCCG CTGCCACACG GACCGCAGCG GCTTCTCCGG CCCCTGGACC TTCTCGCCCA CGGTGCTGAC CAACGACTAC TTCCGCCTGC TGCTCGAGGA GAAGTGGCAG  TGGAAGAAGT GGGACGGCCC CAAGCAGCTC GAGGACAAGT CGACCAAGAC GCTCATGATG CTGCCGACCG ACTATGCCCT CATCCAGGAC AAGGAATTCC TCAAGACGGT CAAGGCCTAC  GCCAAGGACA ACGACCTCTT CTTCAGGGAC TTCTCCAACG TCATTGTCCG CCTCTTTGAG CTCGGCGTGC CCTTCCAGGA GGGCTCCGAG CGCTGGATCA TGAAGCCCAC CTGGGACGAG 
TCGCCTTGA 

Retrieve as FASTA