Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
358 |
PWM (Da): |
40090.78 |
Transmb domain: |
i44-66o |
PI (pH):
| 8.66 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASATRQFAR AATRASTRSF SVAPRQVFRQ NGRRYYSSEP AQKSSSAWIW LTGAAVAGGA GWYFYANGAS ATPKVFNPTK DDYQKVYNEI ANRLEEKDDY DDGSYAPVLL RLAWHASGTY
DKETGTGGSN GATMRFAPES DHGANAGLLA ARNFLEPVKA KFPWITYSDL WILGGVCAIQ EMQGPVIPYR PGRSDRDVSA CTPDGRLPDA TKSSNHLRDI FYRMGFNDQE IVALSGAHAL
GRCHTDRSGF DGPWTFSPTV LTNDYFRLLI EEKWQWKKWN GPAQYEDKST KTLMMLPTDM ALVQDKKLKP FVEKYAKDND AFFKDFSDVV LRLFELGVPF AQGTENQRWT FKPTYDS*
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (2 introns) and 6 ESTs. Incorrect prediction from JGI (extra intron in 5'). Confirmed with ESTs. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTCCG CTACTCGACA GTTCGCCCGT GCGGCTACCC GCGCCTCTAC CCGCAGCTTC TCCGTTGCTC CTCGTCAGGT CTTCCGTCAG AACGGCCGCC GCTACTACTC CTCTGAGCCT
GCCCAGAAGT CCTCTTCGGC CTGGATCTGG CTCACTGGTG CCGCTGTTGC TGGTGGTGCT GGTTGGTACT TCTACGCCAA CGGTGCTTCC GCCACCCCCA AGGTCTTCAA CCCTACCAAG
GACGACTACC AGAAGGTGTA CAACGAGATC GCCAACCGCC TGGAGGAGAA GGATGACTAT GATGATGGCA GCTACGCTCC CGTCCTCCTC CGACTTGCCT GGCACGCCAG CGGCACCTAC
GACAAGGAGA CTGGCACCGG TGGCAGCAAC GGTGCTACCA TGCGTTTCGC CCCCGAGTCC GACCACGGCG CCAATGCTGG TCTGCTCGCT GCCCGCAACT TCCTTGAGCC TGTCAAGGGT
GAGTTCTTTG GCCACTAGTT GAAAGTGTAG CATGCTAACA AGTTCTGTAG CCAAGTTCCC CTGGATCACC TACTCTGATC TTTGGATCCT TGGTGGCGTT TGCGCCATCC AGGAAATGCA
GGGTCCTGTC ATCCCCTACC GACCTGGCCG CAGCGACCGT GATGTCTCTG CTTGCACTCC TGATGGCCGT CTTCCCGACG CCACCAAGAG CTCCAACCAC CTGCGAGACA TCTTCTACCG
CATGGGATTC AACGATCAGG AGATCGTGGC TCTCTCTGGT GCCCACGCTC TCGGCCGATG CCACACTGAC CGATCCGGCT TCGATGGCCC CTGGACCTTC TCTCCTACTG TCCTGACCAA
CGACTACTTC CGTCTTCTCA TCGAGGAGAA GTGGCAGTGG AAGAAGTGGA ACGGCCCTGC TCAGGTGAGA CCAGACACCG AAGTTATGTA GATGCAATTG CTGACTGAAA CTCTCCATAG
TATGAGGACA AGTCCACCAA GACCCTGATG ATGCTTCCCA CCGATATGGC TCTTGTCCAG GACAAGAAGC TCAAGCCCTT CGTCGAGAAG TACGCCAAGG ACAACGATGC CTTCTTCAAG
GACTTTTCGG ATGTCGTTCT CCGACTCTTC GAGCTTGGTG TCCCCTTCGC CCAGGGCACC GAGAACCAGC GATGGACCTT CAAGCCCACT TACGATTCGT AA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTCCG CTACTCGACA GTTCGCCCGT GCGGCTACCC GCGCCTCTAC CCGCAGCTTC TCCGTTGCTC CTCGTCAGGT CTTCCGTCAG AACGGCCGCC GCTACTACTC CTCTGAGCCT
GCCCAGAAGT CCTCTTCGGC CTGGATCTGG CTCACTGGTG CCGCTGTTGC TGGTGGTGCT GGTTGGTACT TCTACGCCAA CGGTGCTTCC GCCACCCCCA AGGTCTTCAA CCCTACCAAG
GACGACTACC AGAAGGTGTA CAACGAGATC GCCAACCGCC TGGAGGAGAA GGATGACTAT GATGATGGCA GCTACGCTCC CGTCCTCCTC CGACTTGCCT GGCACGCCAG CGGCACCTAC
GACAAGGAGA CTGGCACCGG TGGCAGCAAC GGTGCTACCA TGCGTTTCGC CCCCGAGTCC GACCACGGCG CCAATGCTGG TCTGCTCGCT GCCCGCAACT TCCTTGAGCC TGTCAAGGCC
AAGTTCCCCT GGATCACCTA CTCTGATCTT TGGATCCTTG GTGGCGTTTG CGCCATCCAG GAAATGCAGG GTCCTGTCAT CCCCTACCGA CCTGGCCGCA GCGACCGTGA TGTCTCTGCT
TGCACTCCTG ATGGCCGTCT TCCCGACGCC ACCAAGAGCT CCAACCACCT GCGAGACATC TTCTACCGCA TGGGATTCAA CGATCAGGAG ATCGTGGCTC TCTCTGGTGC CCACGCTCTC
GGCCGATGCC ACACTGACCG ATCCGGCTTC GATGGCCCCT GGACCTTCTC TCCTACTGTC CTGACCAACG ACTACTTCCG TCTTCTCATC GAGGAGAAGT GGCAGTGGAA GAAGTGGAAC
GGCCCTGCTC AGTATGAGGA CAAGTCCACC AAGACCCTGA TGATGCTTCC CACCGATATG GCTCTTGTCC AGGACAAGAA GCTCAAGCCC TTCGTCGAGA AGTACGCCAA GGACAACGAT
GCCTTCTTCA AGGACTTTTC GGATGTCGTT CTCCGACTCT TCGAGCTTGG TGTCCCCTTC GCCCAGGGCA CCGAGAACCA GCGATGGACC TTCAAGCCCA CTTACGATTC GTAA
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Retrieve as FASTA
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