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Entry information : GmarCIIBC02
Entry ID 11872
Creation 2013-05-23 (Nizar Fawal)
Last sequence changes 2016-06-16 (Catherine Mathe)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarCIIBC02
Name GmarCIIBC02
Class Other class II peroxidase type C    [Orthogroup: CIIBC001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarCIIBC02
start..stop		 S start..stop
GmarCIIBC01 631 0 1..353 1..358
GmarCIIBC04 572 0 1..353 1..356
GmarCIIBC 526 0 1..353 1..355
GmarCIIBC06 512 0 1..353 1..355
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11872' 'complement(join(542583..542651,542705..542782,542847..542941,543004..543170,543228..543268,543321..543335,543394..543610,543668..543733,543860..543919,544025..544148,544206..544332))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 544206..544332 125 N° 2 544025..544148 122 N° 3 543860..543919 58 N° 4 543668..543733 64
N° 5 543394..543610 215 N° 6 543321..543335 13 N° 7 543228..543268 39 N° 8 543004..543170 165
N° 9 542847..542941 93 N° 10 542705..542782 76 N° 11 542583..542651 67  
complement(join(542583..542651,542705..542782,542847..542941,543004..543170,5432 28..543268,543321..543335,543394..543610,543668..543733,543860..543919,544025..5 44148,544206..544332))


exon

Literature and cross-references GmarCIIBC02
DNA ref. JGI genome:   scaffold_30 (544332..542583)
Cluster/Prediction ref. JGI gene:   75958
Protein sequence: GmarCIIBC02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   352 (330)
PWM (Da):   %s   36693.62 (34354.3)  
PI (pH):   %s   5.31 (5.10) Peptide Signal:   %s   cut: 23 range:23-352
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFARLSLIVSVALAVSQVVNAGLVKRVTCSTGHVTANAACCALFPIVDTLQSGLFDGAQCGEEAHSALRIAFHDAIGFSLKGEGGGADGSILAFNLTETAFRAVDDIVASQFPFFVQSG
LSAGDFVHLAAAVGTANCPGAPRLKFFLGRPAPKAPAPDKTVPEPTDSVTSILARFADAGFSPREVVGLLASHTIAAADVIDASIPGTPFDSTPHHFDGNFFLEVLLKGRLFPGAGPQTG
EVLSPIAGEMRLQSDFAISQDSRTACFWQDMINDQSRLMTEFSNAMAKLQVLGQNTKTLIDCSDVVPVPATMDGTVRIPASFTSKDIQVACPAQAFPKLATRTGPAPTVPPV*

Retrieve as FASTA  
Remarks Complete sequence from genomic (10 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCGCTCGTCTCAGCTTGATCGTCTCAGTTGCACTCGCCGTATCCCAGGTCGTTAATGCTGGCCTCGTCAAGCGCGTAACTTGTTCTACTGGCCACGTAACAGCGAACGCAGCC
TGCTGTGGTTTGTGTATTCTCTTTGAACGCTGTTTAACCTCGTTAATTATTTTACGCTCTTTAGCCCCCTATTCCCGATCGTTGACACTCTGCAATCGGGTCTCTTCGACGGCGCTCAGT
GCGGTGAAGAGGCTCACTCGGCTCTTCGAATCGCGTTCCACGACGCCATTGGATTCTCACTCAAAGGTGAGTTAGCAGTAAACGTGCCAGATTAATCTCATTGCTTTTGATATAGGCGGA
TTGTTTGTTGCTTTTCGTTATTAAGTTGCCACAAACCTCTCACCATTTTTTATAGGGGGGAGGAGGTGCTGATGGATCTATCCTGGCATTCAACTTAACCGAGACTGCATTCCGTGCGTT
CAAACTTTCGAACTTGATATCTTGAATCCCAGCTCATTAAGTCAACCTTCAGATGCTAACGGAGGGTAAATTTCCTCATTTGCTCTTTCTCAAAGAACCGCGTAGTGATTGGGACTTTTT
TAGCGCGTTGACGATATCGTCGCCAGTCAATTCCCGTTCTTCGTGCAGTCAGGATTATCTGCTGGAGATTTGTGCGTATATTCTTTTTGTTCATGGATACTGGGCATTGATTGTCATAAA
CCTTTCAGCGCGTCCACCTTGCCGCAGCGGTTGGCACAGCCAACTGCCCCGGAGCACCGAGGCTCAAGTTCTTCCTTGGCCGACCTGCACCGAAAGCTCCCGCTCCTGATAAGACAGTCC
CGGAACCCACGGACAGCGTGACCTCCATCCTTGCTAGGTTCGCCGATGCTGGGTTCTCTCCCCGAGAGGTTGTTGGTTTGCTTGCCTCGCACACCATTGCCGCTGCCGTAAGTGAATTTC
GCACCCTTTCATTCAACCCTATTTAAATATTTTTCGTGCTTATAGGAGATGTCATCGACGCGGTAAATTTATTGGTTCCTCTATTATCTTCCCAGTTCCTAACTTCTCTCGTAGTCTCAA
TTCCAGGAACTCCGTTTGATTCCACTCCTCATCATTTGTGAGTGCTAAGTAAGCCGTCCATCGGAGAGTGTACTAATGTGCCCACTCTAATCAGCGCGACGGTAACTTCTTCCTCGAAGT
TCTCTTAAAAGGGCGCCTCTTCCCAGGAGCTGGCCCCCAGACCGGAGAAGTCCTTTCTCCCATCGCTGGTGAGATGCGCCTGCAGAGCGACTTTGCCATCTCCCAGGATTCCAGGACTGC
TTGCTTCTGGCAGGACATGATCAGTGAGTACATTTCAGCACGTCGGTCATGTCACAGTCCACTTACTGCCCGATGTTGGAAACAGATATGACCAAAGCCGCCTCATGACCGAATTCAGTA
ATGCCATGGCGAAGCTCCAAGTGTTAGGACAGAACACGAAGACTCTTATTGATTGCTCTGACGTGGGTTTTATTTCAATACGCACCGGTAGTTATTGAAGTTCACACATCGTTTCTATCA
CTACAGGTGTCGTCCCAGTTCCCGCGACGATGGATGGCACCGTTAGAATCCCAGCCAGCTTCACTAGCAAGGATATTCAAGTCGCTGTAAGCTTATTTCACCCTTTTATCTGGCCAACTA
TCCATGCATTCTATCTTAGTGTGCCCAGCCCAAGCATTCCCAAAACTTGCTACCCGAACTGGACCTGCTCCAACCGTTCCCCCTGTGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCGCTCGTCTCAGCTTGATCGTCTCAGTTGCACTCGCCGTATCCCAGGTCGTTAATGCTGGCCTCGTCAAGCGCGTAACTTGTTCTACTGGCCACGTAACAGCGAACGCAGCC
TGCTGTGCCCTATTCCCGATCGTTGACACTCTGCAATCGGGTCTCTTCGACGGCGCTCAGTGCGGTGAAGAGGCTCACTCGGCTCTTCGAATCGCGTTCCACGACGCCATTGGATTCTCA
CTCAAAGGTGAGGGAGGAGGTGCTGATGGATCTATCCTGGCATTCAACTTAACCGAGACTGCATTCCGTGCCGTTGACGATATCGTCGCCAGTCAATTCCCGTTCTTCGTGCAGTCAGGA
TTATCTGCTGGAGATTTCGTCCACCTTGCCGCAGCGGTTGGCACAGCCAACTGCCCCGGAGCACCGAGGCTCAAGTTCTTCCTTGGCCGACCTGCACCGAAAGCTCCCGCTCCTGATAAG
ACAGTCCCGGAACCCACGGACAGCGTGACCTCCATCCTTGCTAGGTTCGCCGATGCTGGGTTCTCTCCCCGAGAGGTTGTTGGTTTGCTTGCCTCGCACACCATTGCCGCTGCCGATGTC
ATCGACGCGTCAATTCCAGGAACTCCGTTTGATTCCACTCCTCATCATTTCGACGGTAACTTCTTCCTCGAAGTTCTCTTAAAAGGGCGCCTCTTCCCAGGAGCTGGCCCCCAGACCGGA
GAAGTCCTTTCTCCCATCGCTGGTGAGATGCGCCTGCAGAGCGACTTTGCCATCTCCCAGGATTCCAGGACTGCTTGCTTCTGGCAGGACATGATCAATGACCAAAGCCGCCTCATGACC
GAATTCAGTAATGCCATGGCGAAGCTCCAAGTGTTAGGACAGAACACGAAGACTCTTATTGATTGCTCTGACGTCGTCCCAGTTCCCGCGACGATGGATGGCACCGTTAGAATCCCAGCC
AGCTTCACTAGCAAGGATATTCAAGTCGCTTGCCCAGCCCAAGCATTCCCAAAACTTGCTACCCGAACTGGACCTGCTCCAACCGTTCCCCCTGTGTAA

Retrieve as FASTA