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Entry information : GmarCIIBC09
Entry ID 11881
Creation 2013-05-23 (Nizar Fawal)
Last sequence changes 2016-03-10 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarCIIBC09
Name GmarCIIBC09
Class Other class II peroxidase type C    [Orthogroup: CIIBC001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarCIIBC09
start..stop		 S start..stop
GmarCIIBC06 602 0 1..356 1..354
GmarCIIBC 600 0 1..356 1..354
GmarCIIBC12 598 0 1..356 1..354
GmarCIIBC07 597 0 1..360 1..361
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 228820..228946 125 N° 2 228700..228764 63 N° 3 228585..228646 60 N° 4 228479..228534 54
N° 5 228409..228421 11 N° 6 228292..228357 64 N° 7 228024..228240 215 N° 8 227929..227969 39
N° 9 227854..227868 13 N° 10 227631..227797 165 N° 11 227487..227581 93 N° 12 227341..227418 76
N° 13 227227..227291 63 N° 14 227153..227165 11  
complement(join(227153..227165,227227..227291,227341..227418,227487..227581,2276 31..227797,227854..227868,227929..227969,228024..228240,228292..228357,228409..2 28421,228479..228534,228585..228646,228700..228764,228820..228946))


exon

Literature and cross-references GmarCIIBC09
DNA ref. JGI genome:   scaffold_38 (228946..227153)
Cluster/Prediction ref. JGI gene:   145790
Protein sequence: GmarCIIBC09
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   359 (337)
PWM (Da):   %s   37497.01 (35219.8)  
PI (pH):   %s   5.89 (5.59) Peptide Signal:   %s   cut: 23 range:23-359
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFARLSAIVAIAFAVSQSANAALTKRVTCASGHVTANAACCALFPMVDKLQTDLFDGGDCGEEAHSALRLSFHDAIGFSIHGGKGGGADGSILIFNKTELAFHANGGIDDITARQFPVF
QELKLSPGDFVHLAAAVGTANCPGAPRLEFMFGRPAPKAPAPDLTVPEPTDSVTKILARFADAGFSPEEAVSLLSSHTIAAADVVDPTIPGTPFDSTVGTFDTQVFLEVLLKGNSFPGNG
SQSGEVLSPLAGEMRLQSDFVISQDPRTACLWQARVNNQQLMVSSFKSAMAKLQTLGQNRARLIDCSDVVPVPKPFTANIKFPATFSRKDVQIACPQLPFPSLATVAGPAPTVPPVPGS*

Retrieve as FASTA  
Remarks Complete sequence from genomic ( 13 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCGCCCGCCTGTCAGCTATCGTCGCAATTGCCTTCGCGGTATCCCAATCCGCTAATGCTGCCCTGACCAAGCGCGTTACTTGCGCCTCTGGTCATGTTACAGCCAATGCTGCG
TGCTGCGGTATGTGGATCCAATAGCTACCCGGTCATTCAAATATTCAAATATTTATTTTCAGCCCCCTATTCCCAATGGTTGACAAGCTTCAAACGGACCTCTTTGACGGCGGTGACTGC
GGCGAAGAGGTGGGCATTGTCATGAATATCTCGCCTAGGTACTGATGCTTTACTATTACTAGGCGCTCACTCAGCTCTGCGCCTGTCATTCCATGATGCTATTGGCTTCTCGATTCATGG
TGGAAAGTAAGTCTGGACAACCATCTTCATTTTCGAAAGCTTATTGGGTATTGCAGGGGGGAGGAGGCGCTGACGGTTCTATTCTCATTTTCAACAAGACGGAACTAGCATTCCGTGAGT
TTTATATTTTAAAGTAGAAATCGCGACATATTGTCTAATTACTCTCTACAGATATGCCAACGGAGGGTAAAACCACTCGTCCTAAGCCTTTGATCAATATCTGACCCATGATATTAGTAT
ATCGACGATATCACTGCTCGGCAATTCCCCGTTTTCCAGGAGCTTAAATTGAGCCCCGGTGACTTGTAAGTCTTCTTAATGGTTACTGAGTGCTTAACGCTACAACGACTACGCAGTGTG
TCCATCTTGCCGCAGCTGTGGGCACAGCCAACTGCCCCGGAGCACCTAGGCTCGAATTCATGTTTGGTCGTCCCGCTCCCAAAGCTCCTGCTCCAGATTTGACGGTGCCTGAGCCGACGG
ACAGCGTCACCAAGATTCTTGCGAGGTTCGCTGACGCCGGCTTCTCTCCAGAAGAGGCCGTTTCACTTCTCTCGTCCCACACCATTGCCGCTGCTGTGTGTTGGTTTCCTTCTATGATAA
TATCCATATTGACATAAATTTAATGCTAGGAGATGTGGTTGACCCAACCATTCCGGGAACTCCTTTCGACTCGTAAGTGTCGTAGTTCCTCCCTTTTTTATGGTTGCTAACCCTTTTGTT
ACTGCCACGCAGCACACTGTCGGTACTTTGTGAGTGAAAGATGATATCTTCTTAAAGACATTTGTACTCATACGATGACGATCAGCGCGACACTCAAGTCTTCCTTGAGGTTCTTCTTAA
GGGTAATTCCTTCCCCGGAAATGGCTCTCAATCCGGAGAGGTTCTGTCGCCTTTGGCAGGAGAGATGCGTCTACAAAGCGACTTCGTTATCTCCCAGGATCCAAGGACGGCTTGCTTATG
GCAGGCGCGAGTTAGTGAGTCGTAAGTTTCGTGGATGGAATTCGCGGGATAACCTCGGAAAAGACACAACCAGCAGCTCATGGTATCCTCATTCAAATCTGCCATGGCGAAGCTCCAAAC
TCTCGGGCAGAACAGAGCTAGATTGATCGACTGCTCTGACGTACGTCCGCCACTTTTACCTCGACCCCATGTCAGATTCAGTCAAACTCACCGAAATCTCTATTTTAGGTGTCGTTCCCG
TCCCGAAGCCATTCACAGCTAACATCAAGTTCCCGGCAACATTCTCGAGGAAGGATGTTCAAATCGCGGTATGTCCTGTAAAACGTTCGAATTGTTCGATGTACCAATATTTGCCAGTGT
GTCCTCAACTTCCTTTCCCGAGCCTCGCGACTGTCGCTGGACCTGCCCCTACCGTCCCACCTGTGTATGTTTCCTTTTTCTTTTCTCACTGGTTCTGCATTCTGACGGATTATCAATTCA
CCCAGCCCCCGGGATCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCGCCCGCCTGTCAGCTATCGTCGCAATTGCCTTCGCGGTATCCCAATCCGCTAATGCTGCCCTGACCAAGCGCGTTACTTGCGCCTCTGGTCATGTTACAGCCAATGCTGCG
TGCTGCGCCCTATTCCCAATGGTTGACAAGCTTCAAACGGACCTCTTTGACGGCGGTGACTGCGGCGAAGAGGCTCACTCAGCTCTGCGCCTGTCATTCCATGATGCTATTGGCTTCTCG
ATTCATGGTGGAAAGGGAGGAGGCGCTGACGGTTCTATTCTCATTTTCAACAAGACGGAACTAGCATTCCATGCCAACGGAGGTATCGACGATATCACTGCTCGGCAATTCCCCGTTTTC
CAGGAGCTTAAATTGAGCCCCGGTGACTTTGTCCATCTTGCCGCAGCTGTGGGCACAGCCAACTGCCCCGGAGCACCTAGGCTCGAATTCATGTTTGGTCGTCCCGCTCCCAAAGCTCCT
GCTCCAGATTTGACGGTGCCTGAGCCGACGGACAGCGTCACCAAGATTCTTGCGAGGTTCGCTGACGCCGGCTTCTCTCCAGAAGAGGCCGTTTCACTTCTCTCGTCCCACACCATTGCC
GCTGCTGATGTGGTTGACCCAACCATTCCGGGAACTCCTTTCGACTCCACTGTCGGTACTTTCGACACTCAAGTCTTCCTTGAGGTTCTTCTTAAGGGTAATTCCTTCCCCGGAAATGGC
TCTCAATCCGGAGAGGTTCTGTCGCCTTTGGCAGGAGAGATGCGTCTACAAAGCGACTTCGTTATCTCCCAGGATCCAAGGACGGCTTGCTTATGGCAGGCGCGAGTTAACAACCAGCAG
CTCATGGTATCCTCATTCAAATCTGCCATGGCGAAGCTCCAAACTCTCGGGCAGAACAGAGCTAGATTGATCGACTGCTCTGACGTCGTTCCCGTCCCGAAGCCATTCACAGCTAACATC
AAGTTCCCGGCAACATTCTCGAGGAAGGATGTTCAAATCGCGTGTCCTCAACTTCCTTTCCCGAGCCTCGCGACTGTCGCTGGACCTGCCCCTACCGTCCCACCTGTCCCGGGATCTTAA

Retrieve as FASTA