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Entry information : GmarCIIBB03
Entry ID 11887
Creation 2013-05-23 (Nizar Fawal)
Last sequence changes 2013-05-23 (Nizar Fawal)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-05-10 (Catherine )
Peroxidase information: GmarCIIBB03
Name GmarCIIBB03
Class Other class II peroxidase type B    [Orthogroup: CIIBB001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarCIIBB03
start..stop		 S start..stop
GmarCIIBB04 582 0 1..361 1..361
GmarCIIBB05 546 0 21..349 15..343
HsubCIIBB08 470 2.62e-167 1..360 1..361
HsubCIIBB01 465 2.81e-165 1..360 1..362
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11887' 'complement(join(770506..770518,770566..770630,770685..770783,770843..770919,770975..771020,771071..771140,771192..771237,771286..771320,771371..771613,771666..771806,771860..771918,771972..772099,772147..772207))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 772147..772207 59 N° 2 771972..772099 126 N° 3 771860..771918 57 N° 4 771666..771806 139
N° 5 771371..771613 241 N° 6 771286..771320 33 N° 7 771192..771237 44 N° 8 771071..771140 68
N° 9 770975..771020 44 N° 10 770843..770919 75 N° 11 770685..770783 97 N° 12 770566..770630 63
N° 13 770506..770518 11  
complement(join(770506..770518,770566..770630,770685..770783,770843..770919,7709 75..771020,771071..771140,771192..771237,771286..771320,771371..771613,771666..7 71806,771860..771918,771972..772099,772147..772207))


exon

Literature and cross-references GmarCIIBB03
DNA ref. JGI genome:   scaffold_24 (772207..770506)
Cluster/Prediction ref. JGI gene:   281593
Protein sequence: GmarCIIBB03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   360 (339)
PWM (Da):   %s   37303.9 (35020.7)  
PI (pH):   %s   4.65 (4.57) Peptide Signal:   %s   cut: 22 range:22-360
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGFSKGLSVLFFSLSLVLVNGLITKRAACPGSTHTAVNAKCCFLFPIVDDLLVNLFDGDCGDEAHGALRLVFHDAIGISPKLGGGGADGSISTFNETELTFGSNAGIDDILDVIGPFIQK
YSHVLSPGDFIQLAGALSLTNCAGAPRVKFMFGRPQPKAASPPGLIPDPEDNVDKILARFKEVGFSPTEVVALLASHSVAGADDVDPGIPGTPFDSTPDIFDSQFFVDVQLRGTGFAGTG
GHSGEVESGIQGVLRLQSDHNLARDSATSCIWQGFVNQQSKLQSAFGAALFKLSLLGQKASSLTDCSEVIPPSLAFNGASARFPPGKSIADIEQACATASFPVLPTVPGPPTAVPPIPQS
*

Retrieve as FASTA  
Remarks complete sequence from genomics (12 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTTCAGTAAAGGTCTCTCCGTCTTGTTCTTCTCCCTTTCTCTGGTTCTTGTCAACGGTATGCATGCTCCCCGTCATAAATCCATGCTCTGATCGTTGCTCTAGGTGTTTGATAAC
CAAGCGGGCAGCGTGTCCAGGAAGTACACATACCGCCGTAAACGCGAAATGCTGTTTCCTGTTCCCCATCGTCGACGATTTGCTCGTCAACTTATTCGACGGTGACTGCGGTGACGAGGT
TTGTATTTTTTTTTTGGTGTTAAGCCCGATATTTTTCTGACTTTCGCTAAGGCGCTCACGGCGCTCTTCGTCTCGTGTTCCATGATGCCATTGGAATATCTCCGAAATTAGGGTATGCGC
CTTTTTAATACGCGAATATTGCAATTACTGAGGTAAAAATAACAGAGAGGTGGAGGAGCAGATGGATCTATCTCTACCTTCAATGAAACGGAACTAACCTTCGGCTCGAACGCTGGTATC
GACGACATCCTGGACGTTATCGGGCCGTTCATCCAGAAATATTCCCACGTTTTGAGCCCTGGAGACTTGTTCGTTGTCCTCCGAAATTTTTGACCTATTTAACTGACTTTCATCACGCAG
CACATCCAACTCGCTGGTGCACTGAGTCTTACCAACTGTGCTGGAGCGCCTCGCGTAAAGTTCATGTTTGGACGTCCTCAACCGAAAGCAGCCTCGCCCCCAGGTCTCATCCCCGATCCA
GAAGATAATGTGGATAAGATCTTGGCTCGTTTCAAAGAAGTTGGTTTCTCCCCAACCGAGGTAGTAGCCCTCCTTGCATCCCACAGTGTTGCTGGTGCCGATGATGTTGACCCTGGTATT
CCCGGGTGAGCTTCATTGTTCTCACCGAACCGGAACTTCGCTCACAAGTTTTTAGAAAACGCCGTTCGATTCTACACCAGATATATTTGACAGTGAGGGTACTTCAATTTGAAAACTGAT
CAGCACTAAAGTTTTACAAGGCGCCAATTTTTCGTCGACGTGCAACTTCGTGGCACAGGTTTCGCTGGGTATGTGGCATTCTGTTCGAGAGATAATTTTCGCTTACCCTATTGTGATAGT
ATACTGGAGGCCATTCAGGAGAAGTGGAGTCCGGTATTCAGGGAGTACTGCGTTTACAGTCTGACCACAACGTGAGTCATTCCATCGCTTATTCGCTGTTTCTCGGTTTAAAATTTCTCA
GTTTTGGCTCGCGATTCAGCGACTAGCTGTATCTGGCAGGGTTTCGTCAGTGAGTCGTCACTCTTAAATCACTACAAAACCAGTGTTGAATAAATACATACCAGACACCAGCAGAGCAAG
TTGCAATCAGCCTTTGGTGCCGCCCTTTTCAAGCTTTCCCTCTTGGGTCAGAAAGCCTCTTCGGTATGTTATAAACGTCGCATTTCTCTGCAAAAAATAACACTCACCCTAAATTTGTAC
AGCTCTGACCGACTGTAGCGAGGTGATCCCTCCGTCTCTTGCTTTCAATGGTGCTTCGGCGCGATTCCCGCCAGGGAAATCCATTGCTGATATAGAACAGGCCGTAAGTTGGATATTCTT
CGCCGACTCGCTAAGTATTTACTAAAGTTGCGATTAGTGTGTGCTACTGCGTCATTCCCCGTTCTTCCTACGGTGCCAGGGCCACCCACTGCCGTCCCTCCCATGTAAGTTAGAACTTCG
TACCATTCCTTCTTTGCTAATCTCTTCTTAGTCTCCGCAATCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTTTCAGTAAAGGTCTCTCCGTCTTGTTCTTCTCCCTTTCTCTGGTTCTTGTCAACGGTTTGATAACCAAGCGGGCAGCGTGTCCAGGAAGTACACATACCGCCGTAAACGCGAAA
TGCTGTTTCCTGTTCCCCATCGTCGACGATTTGCTCGTCAACTTATTCGACGGTGACTGCGGTGACGAGGCTCACGGCGCTCTTCGTCTCGTGTTCCATGATGCCATTGGAATATCTCCG
AAATTAGGAGGTGGAGGAGCAGATGGATCTATCTCTACCTTCAATGAAACGGAACTAACCTTCGGCTCGAACGCTGGTATCGACGACATCCTGGACGTTATCGGGCCGTTCATCCAGAAA
TATTCCCACGTTTTGAGCCCTGGAGACTTCATCCAACTCGCTGGTGCACTGAGTCTTACCAACTGTGCTGGAGCGCCTCGCGTAAAGTTCATGTTTGGACGTCCTCAACCGAAAGCAGCC
TCGCCCCCAGGTCTCATCCCCGATCCAGAAGATAATGTGGATAAGATCTTGGCTCGTTTCAAAGAAGTTGGTTTCTCCCCAACCGAGGTAGTAGCCCTCCTTGCATCCCACAGTGTTGCT
GGTGCCGATGATGTTGACCCTGGTATTCCCGGAACGCCGTTCGATTCTACACCAGATATATTTGACAGCCAATTTTTCGTCGACGTGCAACTTCGTGGCACAGGTTTCGCTGGTACTGGA
GGCCATTCAGGAGAAGTGGAGTCCGGTATTCAGGGAGTACTGCGTTTACAGTCTGACCACAACTTGGCTCGCGATTCAGCGACTAGCTGTATCTGGCAGGGTTTCGTCAACCAGCAGAGC
AAGTTGCAATCAGCCTTTGGTGCCGCCCTTTTCAAGCTTTCCCTCTTGGGTCAGAAAGCCTCTTCGCTGACCGACTGTAGCGAGGTGATCCCTCCGTCTCTTGCTTTCAATGGTGCTTCG
GCGCGATTCCCGCCAGGGAAATCCATTGCTGATATAGAACAGGCCTGTGCTACTGCGTCATTCCCCGTTCTTCCTACGGTGCCAGGGCCACCCACTGCCGTCCCTCCCATTCCGCAATCT
TAA

Retrieve as FASTA