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Entry information : GmarCIIBB05
Entry ID 11891
Creation 2013-05-24 (Nizar Fawal)
Last sequence changes 2013-05-24 (Nizar Fawal)
Sequence status complete
Reviewer Catherine
Last annotation changes 2019-05-10 (Catherine )
Peroxidase information: GmarCIIBB05
Name GmarCIIBB05
Class Other class II peroxidase type B    [Orthogroup: CIIBB001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarCIIBB05
start..stop		 S start..stop
GmarCIIBB04 589 0 15..343 21..349
GmarCIIBB03 546 0 15..343 21..349
HsubCIIBB08 461 4.25e-164 15..343 21..350
HsubCIIBB04 455 1.41e-161 16..343 22..351
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 838727..838897 169 N° 2 838947..839005 57 N° 3 839055..839195 139 N° 4 839245..839487 241
N° 5 839536..839570 33 N° 6 839622..839667 44 N° 7 839719..839788 68 N° 8 839839..839884 44
N° 9 839940..840016 75 N° 10 840067..840165 97 N° 11 840218..840286 67  
join(838727..838897,838947..839005,839055..839195,839245..839487,839536..839570, 839622..839667,839719..839788,839839..839884,839940..840016,840067..840165,84021 8..840286)


exon

Literature and cross-references GmarCIIBB05
DNA ref. JGI genome:   scaffold_12 (838727..840286)
Cluster/Prediction ref. JGI gene:   1328628
Protein sequence: GmarCIIBB05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   351
PWM (Da):   %s   36521.13 Transmb domain:   %s   i7-25o
PI (pH):   %s   4.7
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHSTRSFYALNFPAGLRTKRATCPDGVNTATNAKCCFLFPIVEDLSTNLFDGECGDEAHGALRLMFHDAIGISPKTGGGGADGSIATFNATELAFGANAGIDDILDVVGPFLQKYSNVLT
PGDFIQLAGAVSLTHCAGAPRVKFSLGRPAPKAASPPNLVPDPFDNVATILARFGEVGFSPAEVVALLASHSVAGADDVDPGIPGTPFDSTPNVFDTQFFVDVQLRGTLFPGSGGHQGEV
MSGIAGELRLQSDHNFARDSATNCLFQGFVNQQSKLQTAFGAALFKLSVLGQNTAAMTDCSEVIPQPLALSGSSARFPPGKSLSDIEQACATASFPALQTVPGMNSLPLYR*

Retrieve as FASTA  
Remarks complete sequence from genomics (10 introns). Probably incorrect prediction of 3' end : GPPTAVP is found,
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATTCAACTCGTTCATTTTATGCTCTAAACTTCCCTGCAGGTCTAAGAACGAAGCGGGCAACATGTCCAGACGGTGTCAACACCGCCACGAACGCTAAATGCTGTTTCCTCTTCCCC
ATCGTGGAAGATTTGTCTACCAACTTATTCGACGGTGAATGTGGTGACGAGAGGTCCGTTTTTCTCGAGGTAATATGTACGGAAAATCTAATTGTTATATAGGCACATGGCGCTCTTCGT
CTTATGTTCCATGACGCCATTGGAATTTCTCCAAAAACGGGGGGTATGTAGACTATTCAATATCGTGGCAAATACTCAATCAAAATCGACAGTGGCGGAGGTGCAGACGGTTCCATCGCC
ACTTTCAACGCAACAGAACTGGCCTTCGGCGCTAACGCCGGCATTGACGACATCCTTGATGTTGTCGGGCCGTTCTTGCAGAAGTATTCCAACGTCTTAACTCCAGGAGACTTTTGTGGG
TATCATCCGAGATTATTTAAACAGTATATAACCTGTCTCTTTAGTATCCAGCTTGCCGGGGCGGTCAGTCTTACGCACTGTGCCGGGGCGCCTCGCGTCAAATTTTCCCTTGGAAGGCCG
GCACCGAAGGCAGCATCGCCACCTAACCTTGTCCCTGACCCCTTCGACAATGTTGCCACGATTTTGGCGCGTTTCGGTGAAGTAGGCTTCTCCCCTGCAGAGGTAGTAGCCTTGCTAGCT
TCCCACAGTGTAGCTGGTGCAGACGATGTAGACCCCGGCATCCCTGGGGGTAAGCTTCCCTTGTATGCGGTCATTAAATTGTCCTGAAAATGTCCAGGACGCCATTTGATTCAACACCAA
ATGTCTTCGACACAGTAAGATATAATTTCGCTTCATGACGGAACAAGGACTAACATATTTCGTAGCTCAATTCTTCGTCGACGTACAACTCCGGGGCACCCTCTTCCCTGGGGGTAAGTC
GAATATTTTGCTTACCTGTAAACTTCGTTCACAACGGTTGGCAGTTCTGGAGGTCATCAGGGTGAAGTAATGTCGGGTATTGCGGGCGAATTACGCTTGCAATCTGATCACAATATGTGA
GTCACTTGCAGTTGTTCGTCATTTGTTACTTATCCAGCTTTCGAAGTTCGCCCGTGACTCCGCAACCAACTGTCTCTTCCAAGGTTTCGTCACAGTGAGTATTCCATGCTTTGCTGAACT
GAATAAATATTAAATAACCTGAAATTCAGACCAACAATCTAAGCTACAAACGGCCTTCGGAGCAGCGTTATTTAAGCTATCTGTATTGGGCCAAAACACCGCTGCGCGGTTAGTAGTGAA
TAATTGGACGGCTTTACCAGCGCTTGACATTTGCACAGATGACCGACTGTAGCGAGGTAATTCCCCAGCCTCTTGCGCTCAGTGGTAGTTCAGCAAGATTTCCCCCAGGGAAATCATTGT
CTGACATCGAGCAAGCGCGGTACGTTATTTTAACTTCTAGCGTCGGGTATAGAAATTAACGACGCGGACAGTGTGCTACAGCATCATTCCCAGCTCTCCAGACTGTACCAGGTATGAATT
CACTTCCCCTTTATCGTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATTCAACTCGTTCATTTTATGCTCTAAACTTCCCTGCAGGTCTAAGAACGAAGCGGGCAACATGTCCAGACGGTGTCAACACCGCCACGAACGCTAAATGCTGTTTCCTCTTCCCC
ATCGTGGAAGATTTGTCTACCAACTTATTCGACGGTGAATGTGGTGACGAGGCACATGGCGCTCTTCGTCTTATGTTCCATGACGCCATTGGAATTTCTCCAAAAACGGGTGGCGGAGGT
GCAGACGGTTCCATCGCCACTTTCAACGCAACAGAACTGGCCTTCGGCGCTAACGCCGGCATTGACGACATCCTTGATGTTGTCGGGCCGTTCTTGCAGAAGTATTCCAACGTCTTAACT
CCAGGAGACTTTATCCAGCTTGCCGGGGCGGTCAGTCTTACGCACTGTGCCGGGGCGCCTCGCGTCAAATTTTCCCTTGGAAGGCCGGCACCGAAGGCAGCATCGCCACCTAACCTTGTC
CCTGACCCCTTCGACAATGTTGCCACGATTTTGGCGCGTTTCGGTGAAGTAGGCTTCTCCCCTGCAGAGGTAGTAGCCTTGCTAGCTTCCCACAGTGTAGCTGGTGCAGACGATGTAGAC
CCCGGCATCCCTGGGACGCCATTTGATTCAACACCAAATGTCTTCGACACTCAATTCTTCGTCGACGTACAACTCCGGGGCACCCTCTTCCCTGGTTCTGGAGGTCATCAGGGTGAAGTA
ATGTCGGGTATTGCGGGCGAATTACGCTTGCAATCTGATCACAATTTCGCCCGTGACTCCGCAACCAACTGTCTCTTCCAAGGTTTCGTCAACCAACAATCTAAGCTACAAACGGCCTTC
GGAGCAGCGTTATTTAAGCTATCTGTATTGGGCCAAAACACCGCTGCGATGACCGACTGTAGCGAGGTAATTCCCCAGCCTCTTGCGCTCAGTGGTAGTTCAGCAAGATTTCCCCCAGGG
AAATCATTGTCTGACATCGAGCAAGCGTGTGCTACAGCATCATTCCCAGCTCTCCAGACTGTACCAGGTATGAATTCACTTCCCCTTTATCGTTAA

Retrieve as FASTA