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Entry information : GmarAPx-CcP01
Entry ID 11894
Creation 2013-05-24 (Nizar Fawal)
Last sequence changes 2013-05-24 (Nizar Fawal)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarAPx-CcP01
Name GmarAPx-CcP01
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP002]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarAPx-CcP01
start..stop		 S start..stop
GmarAPx-CcP06 830 0 11..476 7..479
GmarAPx-CcP02 718 0 1..467 1..469
GmarAPx-CcP08 704 0 99..476 33..410
GmarAPx-CcP03 528 0 26..466 19..458
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11894' 'join(974861..975097,975150..975236,975292..975358,975413..975725,975775..975894,975950..976124,976177..976620)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 974861..975097 235 N° 2 975150..975236 85 N° 3 975292..975358 65 N° 4 975413..975725 311
N° 5 975775..975894 118 N° 6 975950..976124 173 N° 7 976177..976620 442  
join(974861..975097,975150..975236,975292..975358,975413..975725,975775..975894, 975950..976124,976177..976620)


exon

Literature and cross-references GmarAPx-CcP01
DNA ref. JGI genome:   scaffold_10 (974861..976620)
Cluster/Prediction ref. JGI gene:   65948
Protein sequence: GmarAPx-CcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   480 (456)
PWM (Da):   %s   52227.08 (49455.6) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.56 (5.56) Peptide Signal:   %s   cut: 25 range:25-480
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPATTFLSYILWIFSIPVISFVSAEYTWPSAQHDALEQFLYEGTHVTDDNVAGLAGFCLHRALPGGFQPSTFAAEWVRLAYHDMATHNATDGTGGLDASIFYELDRPENIGAGNVNSIGD
FKGHSSKLVSRSDIIAMGVIWGVAACGGPPIPFRYGRKDALRAGRSGVPEPQQDLASHIESFRLQGFTQKEMIALVACGHTLGGVRSVDFQDIVPDPSNSSIATFDTTSSFDHLIATQYL
NSSTKNPLIRVPSGNMTFASDLRIFSSDRNATMKGLNSETSFFQTCSTLLAKMIDTIPSNVHLSDVVTLLPVKVSNAQITAIDSQLVFMADLRVTFPIDINPMAVSKVRMLWCDSRGQFK
NCNRVTNVASLPFLDAADTSPLTDSFNIQFALYRFKVQISAARSVSKFWFEIDGVVHNNGGKGYPIGQDEIIFVPSLGSVDQKFPQPDPANPSEFLPTSYNLVFGVSDTLSIANTFSKSS
*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTGCTACCACTTTCCTCAGCTATATTCTCTGGATTTTCTCCATACCGGTGATTTCATTCGTCTCAGCCGAATATACCTGGCCGTCGGCTCAGCATGATGCCCTCGAACAATTTCTA
TACGAAGGCACCCATGTAACCGATGACAACGTCGCCGGTTTAGCAGGTTTCTGCCTCCACAGAGCCCTCCCTGGAGGATTTCAGCCGTCTACGTTCGCTGCTGAATGGGTACGCCTATAG
TAAGTGTATTCGTCAATCAAAGGGACCTGCGAAACATGACGATTTTAATAGGCGTACCATGATATGGCCACTCATAATGCCACTGACGGCACTGGTGGGTTGGATGCTTCGATTTTCTAT
GAGCTCGATAGACCAGAGAGGTAAAAGACTCCGATATATGACTTTAAAATCCTACTCAATTTCCTTATCTTACAGAACATCGGTGCCGGAAACGTCAACTCGATTGGGGATTTCAAAGGC
CATTCAAGTAAACTTGTATCTATAGTAAGAGACCCCTACCTCAAACCGTCCTTGAAAACTGAACTGTCCAATTCAAAGGATCTGATATTATTGCGATGGGCGTCATCTGGGGCGTCGCAG
CATGTGGTGGGCCACCGATACCCTTTCGATATGGAAGGAAAGACGCCTTGAGAGCCGGAAGATCTGGGGTCCCAGAGCCACAACAAGATCTTGCTAGCCATATAGAAAGTTTCCGTCTTC
AAGGATTCACGCAAAAAGAGATGATTGCACTCGTCGCATGCGGACATACTCTCGGAGGCGTCAGGAGCGTTGACTTTCAAGATATCGTACCTGATCCATCAAATTCTAGTATCGCGACGT
TCGATACTACGTCCAGCTTTGATCATCTCATATGTACGAATTCCTGCTAAGAAATTCGGCTGATGCTAATCCACCGTTTTAGTGCCACACAATACTTAAACTCGTCCACTAAAAATCCAT
TGATCAGGGTGCCATCAGGAAATATGACGTTCGCATCGGATTTGCGTATATTCAGCAGTGACCGAAACGCCACCATGAAAGGGGGTATGTCGAACCCTACACCTAGAAGCTATTTCATCC
ACTAATCAGTGTACTGTAGACTCAATTCCGAGACATCTTTCTTCCAGACTTGTTCGACACTACTAGCCAAGATGATCGACACTATACCTTCAAATGTCCACCTGAGTGATGTAGTCACCC
TCCTTCCGGTGAAAGTGTCCAACGCACAAATCACAGCAATCGATTCACAGCTCGTTTTTATGGCTGACCTCAGAGAGTACTTTCGCGTTAACCCGGGCAAACTTGACAATGTCTAATTGA
TCTTTCAGGTGACCTTTCCGATTGACATTAATCCTATGGCAGTCAGTAAAGTCCGGATGTTGTGGTGCGACAGCCGTGGCCAATTCAAGAACTGTAATCGAGTCACCAATGTTGCATCGC
TCCCATTCTTGGACGCAGCAGACACATCTCCCTTAACCGATTCATTTAATATCCAATTCGCTTTGTACAGATTCAAGGTCCAGATTTCAGCCGCTCGATCTGTCTCGAAGTTCTGGTTTG
AAATTGATGGTGTTGTCCACAACAACGGAGGCAAAGGCTACCCCATAGGTCAAGACGAAATCATATTTGTGCCGTCGTTGGGGAGCGTAGACCAGAAATTTCCCCAACCTGATCCAGCAA
ATCCATCTGAATTTTTGCCGACAAGCTATAACCTGGTTTTTGGTGTAAGCGATACCCTCTCAATCGCCAATACGTTTTCTAAGTCATCCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTGCTACCACTTTCCTCAGCTATATTCTCTGGATTTTCTCCATACCGGTGATTTCATTCGTCTCAGCCGAATATACCTGGCCGTCGGCTCAGCATGATGCCCTCGAACAATTTCTA
TACGAAGGCACCCATGTAACCGATGACAACGTCGCCGGTTTAGCAGGTTTCTGCCTCCACAGAGCCCTCCCTGGAGGATTTCAGCCGTCTACGTTCGCTGCTGAATGGGTACGCCTAGCG
TACCATGATATGGCCACTCATAATGCCACTGACGGCACTGGTGGGTTGGATGCTTCGATTTTCTATGAGCTCGATAGACCAGAGAACATCGGTGCCGGAAACGTCAACTCGATTGGGGAT
TTCAAAGGCCATTCAAGTAAACTTGTATCTAGATCTGATATTATTGCGATGGGCGTCATCTGGGGCGTCGCAGCATGTGGTGGGCCACCGATACCCTTTCGATATGGAAGGAAAGACGCC
TTGAGAGCCGGAAGATCTGGGGTCCCAGAGCCACAACAAGATCTTGCTAGCCATATAGAAAGTTTCCGTCTTCAAGGATTCACGCAAAAAGAGATGATTGCACTCGTCGCATGCGGACAT
ACTCTCGGAGGCGTCAGGAGCGTTGACTTTCAAGATATCGTACCTGATCCATCAAATTCTAGTATCGCGACGTTCGATACTACGTCCAGCTTTGATCATCTCATTGCCACACAATACTTA
AACTCGTCCACTAAAAATCCATTGATCAGGGTGCCATCAGGAAATATGACGTTCGCATCGGATTTGCGTATATTCAGCAGTGACCGAAACGCCACCATGAAAGGACTCAATTCCGAGACA
TCTTTCTTCCAGACTTGTTCGACACTACTAGCCAAGATGATCGACACTATACCTTCAAATGTCCACCTGAGTGATGTAGTCACCCTCCTTCCGGTGAAAGTGTCCAACGCACAAATCACA
GCAATCGATTCACAGCTCGTTTTTATGGCTGACCTCAGAGTGACCTTTCCGATTGACATTAATCCTATGGCAGTCAGTAAAGTCCGGATGTTGTGGTGCGACAGCCGTGGCCAATTCAAG
AACTGTAATCGAGTCACCAATGTTGCATCGCTCCCATTCTTGGACGCAGCAGACACATCTCCCTTAACCGATTCATTTAATATCCAATTCGCTTTGTACAGATTCAAGGTCCAGATTTCA
GCCGCTCGATCTGTCTCGAAGTTCTGGTTTGAAATTGATGGTGTTGTCCACAACAACGGAGGCAAAGGCTACCCCATAGGTCAAGACGAAATCATATTTGTGCCGTCGTTGGGGAGCGTA
GACCAGAAATTTCCCCAACCTGATCCAGCAAATCCATCTGAATTTTTGCCGACAAGCTATAACCTGGTTTTTGGTGTAAGCGATACCCTCTCAATCGCCAATACGTTTTCTAAGTCATCC
TGA

Retrieve as FASTA