Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
410 |
PWM (Da): |
44622.81 |
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PI (pH):
| 6.62 |
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Sequence 554
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MVDEIPDPIELLSNPSRFLALVRLMIDSFNQKTLIYDYTRVLNVGAGNVNSIGDFKGHSSKLVSRSDIIAMGVIWGVAACGGPPIPFRYGRKDALKAGRSGVPEPQQDLASHIESFRLQGFTQKEMIALVACGHTLGGVRSVDFQDIVPDPSNASIATFDTTSGFDHLIVTQYLNSSTKNPLIRVPSGNSTFASDLRIFGSHRNATMKGLNSETSFSQTCTTLLAKMIDTVPSNVHLSDVVTLLPVKVSSAQITAIDSQLVFMADLVTFPIDINPMAVSKVRMLWCDSRGQFKNCNRVTNIASIPFLDAADTSPLTDSFNIQFALYRFKVQISASRSVSKFWFEIDGVVHNNGSNDYLIGQDEIIFVPSLGSVDVKFPQPDPANPSQFLPRTYNLVFGVSGFLLIADAF* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (5 introns). incorrect prediction from JGI (first exon is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTTGACGAAATACCTGACCCGATCGAACTTCTCAGTAATCCATCCCGTTTTCTCGCTCTAGTCAGGTTAATGATTGATTCGTTCAACCAGAAAACTTTGATATATGATTATACGCGT GTACTGGTACGTTATTTCTCTTCATTTCTTGACTAGACTCCTGATGGTTTTTTGTTTTCTATTGAGGAAGCTGAAAACCTTTGCTCACCCTGTCAAAACGGTAGAAGATTCGATTGATAC CGCCCAATAAGCGTCGAAGCCGTCATTGGAGCTACATTTCTCTAGATCAAAGGCCGCGAATTCACTGGTGGCTCCTTCCTCGGCAACTCGTAAGAGGATTAAGCGAAGCAATACACCGGC AGTGCGTTCCATGCGATGAATGTATTTTTTTATCGTTTTCATTCTGGCAACTCATATTGCGGGTGCTTTTAGCCTCGAGCTAGCGCGGACAGAGGGAGCAAGCATTTGGGTTGATCGCAT TCTGTAACTCGCGTGCAGCTCGTGAAATTTTGGTTCTCGTCACGATGGAAAATAAGGTCATGGTCGTCGAACTCTTGAGGTGAATACGAGAACTGCTTTGACTTAAATTTAGGTTCGTAA TACTACCCCCATTCATGCAATGTTCGACTTTCAAGAACAATTCTAGTCTTGTGCTGCGCCGTACTGACGTTAGAGTCGTAGTGTCTACGAGTACAATAAGGGCCTATCCACCAACTGGCA CCGTATAGAACAATTCGGAACTGCGCAGTACTGGTCAGACTTTCAGGACTGGCTGCGCACGTCGCCTGAAGAAATTCGTTATCAAGCAGGGACCGCACACATTTACTCTAAAATCCTACT CAATTTCTTTATGTACCTCACAGAATGTCGGTGCCGGAAACGTCAACTCGATTGGGGATTTCAAAGGCCATTCAAGCAAACTCGTATCTAGTAAGAGAACCCTTACCTTAAAGTCGTGCT TAAAACCGAACTGTCAAATTCAAAGGATCCGATATCATTGCTATGGGCGTCATCTGGGGCGTCGCAGCATGCGGTGGGCCTCCGATACCTTTTCGATACGGAAGGAAAGACGCCTTGAAA GCCGGAAGATCTGGGGTCCCAGAGCCACAACAAGATCTTGCTAGCCATATAGAAAGTTTCCGTCTTCAAGGATTCACGCAAAAAGAGATGATTGCACTAGTCGCATGCGGACATACTCTC GGAGGCGTCAGGAGCGTTGACTTTCAAGATATCGTTCCTGATCCATCGAATGCCAGTATCGCGACGTTCGATACCACATCTGGCTTCGATCACCTCATGTACAAATTCCTGCCAAGAAAT TCAGCTGATGCTAATCCACCGTTTTAGTGTCACACAATACTTAAACTCGTCCACTAAAAATCCGTTGATCAGGGTGCCGTCAGGAAATTCAACGTTCGCATCAGATCTGCGAATATTTGG CAGCCACCGAAATGCCACCATGAAAGGGTATGCCGGACCATACACCTATAATCTATTAAATTCACTAAACAGTGTATTGTAGACTTAATTCCGAGACGTCTTTCTCCCAAACTTGCACGA CACTACTGGCCAAAATGATTGACACCGTGCCGTCAAATGTCCACCTGAGCGATGTAGTCACGCTCCTTCCGGTGAAAGTGTCCAGCGCACAAATCACAGCAATCGATTCACAGCTCGTTT TTATGGCTGACCTCAGAGTACTTTCGCGTTAACCCGGGCAAACCTGTCAACGTCTAATTGATCTTTTCAGGTGACCTTTCCGATTGACATTAATCCTATGGCAGTCAGTAAAGTCCGGAT GTTGTGGTGCGACAGCCGTGGCCAATTCAAGAACTGTAATCGAGTCACCAATATTGCATCGATCCCATTCCTGGATGCAGCAGACACGTCTCCCTTAACCGATTCATTTAATATCCAGTT CGCTTTGTACAGATTCAAGGTCCAGATTTCAGCCTCTCGATCTGTCTCGAAGTTCTGGTTTGAAATTGATGGTGTTGTCCACAACAATGGAAGCAACGACTACCTAATAGGTCAAGACGA AATCATATTTGTGCCGTCGTTGGGGAGCGTGGACGTTAAATTCCCGCAACCTGATCCAGCAAATCCGTCTCAATTCTTGCCGAGGACGTATAACCTGGTTTTTGGGGTAAGCGGTTTCCT CTTGATCGCCGATGCGTTCTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTTGACGAAATACCTGACCCGATCGAACTTCTCAGTAATCCATCCCGTTTTCTCGCTCTAGTCAGGTTAATGATTGATTCGTTCAACCAGAAAACTTTGATATATGATTATACGCGT GTACTGAATGTCGGTGCCGGAAACGTCAACTCGATTGGGGATTTCAAAGGCCATTCAAGCAAACTCGTATCTAGATCCGATATCATTGCTATGGGCGTCATCTGGGGCGTCGCAGCATGC GGTGGGCCTCCGATACCTTTTCGATACGGAAGGAAAGACGCCTTGAAAGCCGGAAGATCTGGGGTCCCAGAGCCACAACAAGATCTTGCTAGCCATATAGAAAGTTTCCGTCTTCAAGGA TTCACGCAAAAAGAGATGATTGCACTAGTCGCATGCGGACATACTCTCGGAGGCGTCAGGAGCGTTGACTTTCAAGATATCGTTCCTGATCCATCGAATGCCAGTATCGCGACGTTCGAT ACCACATCTGGCTTCGATCACCTCATTGTCACACAATACTTAAACTCGTCCACTAAAAATCCGTTGATCAGGGTGCCGTCAGGAAATTCAACGTTCGCATCAGATCTGCGAATATTTGGC AGCCACCGAAATGCCACCATGAAAGGACTTAATTCCGAGACGTCTTTCTCCCAAACTTGCACGACACTACTGGCCAAAATGATTGACACCGTGCCGTCAAATGTCCACCTGAGCGATGTA GTCACGCTCCTTCCGGTGAAAGTGTCCAGCGCACAAATCACAGCAATCGATTCACAGCTCGTTTTTATGGCTGACCTCAGAGTGACCTTTCCGATTGACATTAATCCTATGGCAGTCAGT AAAGTCCGGATGTTGTGGTGCGACAGCCGTGGCCAATTCAAGAACTGTAATCGAGTCACCAATATTGCATCGATCCCATTCCTGGATGCAGCAGACACGTCTCCCTTAACCGATTCATTT AATATCCAGTTCGCTTTGTACAGATTCAAGGTCCAGATTTCAGCCTCTCGATCTGTCTCGAAGTTCTGGTTTGAAATTGATGGTGTTGTCCACAACAATGGAAGCAACGACTACCTAATA GGTCAAGACGAAATCATATTTGTGCCGTCGTTGGGGAGCGTGGACGTTAAATTCCCGCAACCTGATCCAGCAAATCCGTCTCAATTCTTGCCGAGGACGTATAACCTGGTTTTTGGGGTA AGCGGTTTCCTCTTGATCGCCGATGCGTTCTGA |
Retrieve as FASTA
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