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Entry information : GmarAPx-CcP08
Entry ID 11917
Creation 2013-05-27 (Christophe Dunand)
Last sequence changes 2013-05-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarAPx-CcP08
Name GmarAPx-CcP08
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP002]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarAPx-CcP08
start..stop		 S start..stop
GmarAPx-CcP01 704 0 33..410 99..476
GmarAPx-CcP06 652 0 33..410 98..479
GmarAPx-CcP02 555 0 6..402 65..470
GmarAPx-CcP03 415 2.17e-141 33..400 93..458
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11917' 'join(954919..955044,955782..955848,955904..956216,956266..956385,956441..956615,956669..957100)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 954919..955044 124 N° 2 955782..955848 65 N° 3 955904..956216 311 N° 4 956266..956385 118
N° 5 956441..956615 173 N° 6 956669..957100 430  
join(954919..955044,955782..955848,955904..956216,956266..956385,956441..956615, 956669..957100)


exon

Literature and cross-references GmarAPx-CcP08
DNA ref. JGI genome:   scaffold_10 (954919..957100)
Cluster/Prediction ref. JGI gene:   65949
Protein sequence: GmarAPx-CcP08
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   410 (282)
PWM (Da):   %s   44622.81 (30785.3)  
PI (pH):   %s   6.62 (6.30) Peptide Signal:   %s   cut: 20 range:20-301
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVDEIPDPIELLSNPSRFLALVRLMIDSFNQKTLIYDYTRVLNVGAGNVNSIGDFKGHSSKLVSRSDIIAMGVIWGVAACGGPPIPFRYGRKDALKAGRSGVPEPQQDLASHIESFRLQGFTQKEMIALVACGHTLGGVRSVDFQDIVPDPSNASIATFDTT
SGFDHLIVTQYLNSSTKNPLIRVPSGNSTFASDLRIFGSHRNATMKGLNSETSFSQTCTTLLAKMIDTVPSNVHLSDVVTLLPVKVSSAQITAIDSQLVFMADLVTFPIDINPMAVSKVR
MLWCDSRGQFKNCNRVTNIASIPFLDAADTSPLTDSFNIQFALYRFKVQISASRSVSKFWFEIDGVVHNNGSNDYLIGQDEIIFVPSLGSVDVKFPQPDPANPSQFLPRTYNLVFGVSGF
LLIADAF*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns). incorrect prediction from JGI (first exon is missing).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTGACGAAATACCTGACCCGATCGAACTTCTCAGTAATCCATCCCGTTTTCTCGCTCTAGTCAGGTTAATGATTGATTCGTTCAACCAGAAAACTTTGATATATGATTATACGCGT
GTACTGTGGTACGTTATTTCTCTTCATTTCTTGACTAGACTCCTGATGGTTTTTTGTTTTCTATTGAGGAAGCTGAAAACCTTTGCTCACCCTGTCAAAACGGTAGAAGATTCGATTGAT
ACCGCCCAATAAGCGTCGAAGCCGTCATTGGAGCTACATTTCTCTAGATCAAAGGCCGCGAATTCACTGGTGGCTCCTTCCTCGGCAACTCGTAAGAGGATTAAGCGAAGCAATACACCG
GCAGTGCGTTCCATGCGATGAATGTATTTTTTTATCGTTTTCATTCTGGCAACTCATATTGCGGGTGCTTTTAGCCTCGAGCTAGCGCGGACAGAGGGAGCAAGCATTTGGGTTGATCGC
ATTCTGTAACTCGCGTGCAGCTCGTGAAATTTTGGTTCTCGTCACGATGGAAAATAAGGTCATGGTCGTCGAACTCTTGAGGTGAATACGAGAACTGCTTTGACTTAAATTTAGGTTCGT
AATACTACCCCCATTCATGCAATGTTCGACTTTCAAGAACAATTCTAGTCTTGTGCTGCGCCGTACTGACGTTAGAGTCGTAGTGTCTACGAGTACAATAAGGGCCTATCCACCAACTGG
CACCGTATAGAACAATTCGGAACTGCGCAGTACTGGTCAGACTTTCAGGACTGGCTGCGCACGTCGCCTGAAGAAATTCGTTATCAAGCAGGGACCGCACACATTTACTCTAAAATCCTA
CTCAATTTCTTTATGTACCTCACAGAATGTCGGTGCCGGAAACGTCAACTCGATTGGGGATTTCAAAGGCCATTCAAGCAAACTCGTATCTATAGTAAGAGAACCCTTACCTTAAAGTCG
TGCTTAAAACCGAACTGTCAAATTCAAAGGATCCGATATCATTGCTATGGGCGTCATCTGGGGCGTCGCAGCATGCGGTGGGCCTCCGATACCTTTTCGATACGGAAGGAAAGACGCCTT
GAAAGCCGGAAGATCTGGGGTCCCAGAGCCACAACAAGATCTTGCTAGCCATATAGAAAGTTTCCGTCTTCAAGGATTCACGCAAAAAGAGATGATTGCACTAGTCGCATGCGGACATAC
TCTCGGAGGCGTCAGGAGCGTTGACTTTCAAGATATCGTTCCTGATCCATCGAATGCCAGTATCGCGACGTTCGATACCACATCTGGCTTCGATCACCTCATATGTACAAATTCCTGCCA
AGAAATTCAGCTGATGCTAATCCACCGTTTTAGTGTCACACAATACTTAAACTCGTCCACTAAAAATCCGTTGATCAGGGTGCCGTCAGGAAATTCAACGTTCGCATCAGATCTGCGAAT
ATTTGGCAGCCACCGAAATGCCACCATGAAAGGGGGTATGCCGGACCATACACCTATAATCTATTAAATTCACTAAACAGTGTATTGTAGACTTAATTCCGAGACGTCTTTCTCCCAAAC
TTGCACGACACTACTGGCCAAAATGATTGACACCGTGCCGTCAAATGTCCACCTGAGCGATGTAGTCACGCTCCTTCCGGTGAAAGTGTCCAGCGCACAAATCACAGCAATCGATTCACA
GCTCGTTTTTATGGCTGACCTCAGAGAGTACTTTCGCGTTAACCCGGGCAAACCTGTCAACGTCTAATTGATCTTTTCAGGTGACCTTTCCGATTGACATTAATCCTATGGCAGTCAGTA
AAGTCCGGATGTTGTGGTGCGACAGCCGTGGCCAATTCAAGAACTGTAATCGAGTCACCAATATTGCATCGATCCCATTCCTGGATGCAGCAGACACGTCTCCCTTAACCGATTCATTTA
ATATCCAGTTCGCTTTGTACAGATTCAAGGTCCAGATTTCAGCCTCTCGATCTGTCTCGAAGTTCTGGTTTGAAATTGATGGTGTTGTCCACAACAATGGAAGCAACGACTACCTAATAG
GTCAAGACGAAATCATATTTGTGCCGTCGTTGGGGAGCGTGGACGTTAAATTCCCGCAACCTGATCCAGCAAATCCGTCTCAATTCTTGCCGAGGACGTATAACCTGGTTTTTGGGGTAA
GCGGTTTCCTCTTGATCGCCGATGCGTTCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTGACGAAATACCTGACCCGATCGAACTTCTCAGTAATCCATCCCGTTTTCTCGCTCTAGTCAGGTTAATGATTGATTCGTTCAACCAGAAAACTTTGATATATGATTATACGCGT
GTACTGAATGTCGGTGCCGGAAACGTCAACTCGATTGGGGATTTCAAAGGCCATTCAAGCAAACTCGTATCTAGATCCGATATCATTGCTATGGGCGTCATCTGGGGCGTCGCAGCATGC
GGTGGGCCTCCGATACCTTTTCGATACGGAAGGAAAGACGCCTTGAAAGCCGGAAGATCTGGGGTCCCAGAGCCACAACAAGATCTTGCTAGCCATATAGAAAGTTTCCGTCTTCAAGGA
TTCACGCAAAAAGAGATGATTGCACTAGTCGCATGCGGACATACTCTCGGAGGCGTCAGGAGCGTTGACTTTCAAGATATCGTTCCTGATCCATCGAATGCCAGTATCGCGACGTTCGAT
ACCACATCTGGCTTCGATCACCTCATTGTCACACAATACTTAAACTCGTCCACTAAAAATCCGTTGATCAGGGTGCCGTCAGGAAATTCAACGTTCGCATCAGATCTGCGAATATTTGGC
AGCCACCGAAATGCCACCATGAAAGGACTTAATTCCGAGACGTCTTTCTCCCAAACTTGCACGACACTACTGGCCAAAATGATTGACACCGTGCCGTCAAATGTCCACCTGAGCGATGTA
GTCACGCTCCTTCCGGTGAAAGTGTCCAGCGCACAAATCACAGCAATCGATTCACAGCTCGTTTTTATGGCTGACCTCAGAGTGACCTTTCCGATTGACATTAATCCTATGGCAGTCAGT
AAAGTCCGGATGTTGTGGTGCGACAGCCGTGGCCAATTCAAGAACTGTAATCGAGTCACCAATATTGCATCGATCCCATTCCTGGATGCAGCAGACACGTCTCCCTTAACCGATTCATTT
AATATCCAGTTCGCTTTGTACAGATTCAAGGTCCAGATTTCAGCCTCTCGATCTGTCTCGAAGTTCTGGTTTGAAATTGATGGTGTTGTCCACAACAATGGAAGCAACGACTACCTAATA
GGTCAAGACGAAATCATATTTGTGCCGTCGTTGGGGAGCGTGGACGTTAAATTCCCGCAACCTGATCCAGCAAATCCGTCTCAATTCTTGCCGAGGACGTATAACCTGGTTTTTGGGGTA
AGCGGTTTCCTCTTGATCGCCGATGCGTTCTGA

Retrieve as FASTA