Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
248 |
PWM (Da): |
27952.2 |
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PI (pH):
| 9.73 |
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Sequence 290
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MTQVVIRSWHPTHSIFNRFCRVTSSNLCSTALSSKRRLASFRYPADESTIATFTSLTSATSTPRHPRHYISTITNTTRTMASATTFYDFKVKDKKGNEKSLADYKGKVVLVVNTASKCGFTPQYAGLEKLYKDITAKYPDDFVILGFPCNQFGGQEPGTDDDIQSFCQVNYGVTFPIMGKTDVNGDKAEPVFEWMKAEKPGLLGMKRVKWNFEKFLIGRDGKVKERWASTTKPESLEKPILEELEKKA* |
Retrieve as FASTA
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Remarks |
complete sequence from genomics (1 intron). Incorrect prediction from JGI (5' end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACACAAGTCGTTATAAGGAGCTGGCATCCCACGCATTCAATCTTCAACCGTTTCTGCAGAGTGACTTCATCAAATCTGTGTAGTACAGCCTTATCATCTAAACGTCGATTAGCGAGT TTCAGATACCCCGCTGACGAGAGCACTATCGCGACTTTTACAAGCTTAACCTCAGCTACAAGTACCCCGCGACATCCGAGACATTATATCTCTACCATCACCAACACAACCCGCACAATG GCTTCAGCTACGACATTCTACGACTTCAAGGTCAAGGACAGTACGTAGTGCGGAACCAATGCTTAGACACCATATGGACATATGCTAACGGCTACTACCCTTGCCAACAGAGAAGGGTAA CGAGAAGTCCTTAGCCGACTACAAGGGCAAGGTAGTACTAGTCGTCAACACAGCGTCCAAGTGCGGCTTCACACCGCAATACGCCGGACTCGAAAAGCTATACAAAGATATCACGGCGAA GTACCCCGATGATTTCGTTATCCTAGGCTTCCCTTGCAACCAATTCGGCGGCCAGGAACCCGGCACCGACGATGACATCCAGAGCTTCTGCCAAGTCAACTACGGCGTGACCTTCCCCAT CATGGGCAAGACGGACGTGAACGGCGACAAGGCCGAGCCGGTGTTCGAGTGGATGAAGGCCGAGAAGCCTGGGCTCCTGGGCATGAAGCGCGTGAAGTGGAACTTTGAGAAGTTCCTGAT CGGAAGGGACGGCAAGGTCAAGGAGCGGTGGGCCAGTACCACCAAGCCGGAGAGTTTGGAGAAGCCTATCTTGGAGGAGCTGGAGAAGAAGGCGTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACACAAGTCGTTATAAGGAGCTGGCATCCCACGCATTCAATCTTCAACCGTTTCTGCAGAGTGACTTCATCAAATCTGTGTAGTACAGCCTTATCATCTAAACGTCGATTAGCGAGT TTCAGATACCCCGCTGACGAGAGCACTATCGCGACTTTTACAAGCTTAACCTCAGCTACAAGTACCCCGCGACATCCGAGACATTATATCTCTACCATCACCAACACAACCCGCACAATG GCTTCAGCTACGACATTCTACGACTTCAAGGTCAAGGACAAGAAGGGTAACGAGAAGTCCTTAGCCGACTACAAGGGCAAGGTAGTACTAGTCGTCAACACAGCGTCCAAGTGCGGCTTC ACACCGCAATACGCCGGACTCGAAAAGCTATACAAAGATATCACGGCGAAGTACCCCGATGATTTCGTTATCCTAGGCTTCCCTTGCAACCAATTCGGCGGCCAGGAACCCGGCACCGAC GATGACATCCAGAGCTTCTGCCAAGTCAACTACGGCGTGACCTTCCCCATCATGGGCAAGACGGACGTGAACGGCGACAAGGCCGAGCCGGTGTTCGAGTGGATGAAGGCCGAGAAGCCT GGGCTCCTGGGCATGAAGCGCGTGAAGTGGAACTTTGAGAAGTTCCTGATCGGAAGGGACGGCAAGGTCAAGGAGCGGTGGGCCAGTACCACCAAGCCGGAGAGTTTGGAGAAGCCTATC TTGGAGGAGCTGGAGAAGAAGGCGTAA |
Retrieve as FASTA
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