View Redoxidase 12039

Entry information : LuAPx116(Lus10020942|PACid:23177975)

Entry ID	12039
Creation	2013-05-28 (Qiang Li)
Last sequence changes	2013-05-29 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2013-10-11 (Qiang Li)

Peroxidase information: LuAPx116(Lus10020942|PACid:23177975)

Name

LuAPx116(Lus10020942|PACid:23177975)

Class

Ascorbate peroxidase [Orthogroup: APx2004]

Taxonomy

Eukaryota Viridiplantae Streptophyta Linaceae Linum

Organism

Linum usitatissimum (flax) [TaxId: 4006 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	LuAPx116 start..stop	S start..stop
LuAPx50	688	0	22..375	1..357
MeAPx02	536	0	22..375	1..350
PtAPx10	529	0	22..375	1..348
VvAPx07	521	0	22..374	1..344

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12039' 'complement(join(763980..764090,764196..764330,765013..765150,765260..765366,765450..765580,765660..765700,765806..765871,765948..765982,766073..766157,766237..766335,766406..766582))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	766406..766582	175	N° 2	766237..766335	97	N° 3	766073..766157	83	N° 4	765948..765982	33
N° 5	765806..765871	64	N° 6	765660..765700	39	N° 7	765450..765580	129	N° 8	765260..765366	105
N° 9	765013..765150	136	N° 10	764196..764330	133	N° 11	763980..764090	109
complement(join(763980..764090,764196..764330,765013..765150,765260..765366,7654 50..765580,765660..765700,765806..765871,765948..765982,766073..766157,766237..7 66335,766406..766582))

Literature and cross-references LuAPx116(Lus10020942|PACid:23177975)

DNA ref.	Phytozome 12: scaffold711 (766582..763980)

Protein sequence: LuAPx116(Lus10020942|PACid:23177975)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	374
PWM (Da):	39997.44
PI (pH):	8.42

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSVTTQKSYPPLAVKARKQAAMGVSFLSTTVVPSLHHIPFLSSSSSNAAASSVSSSRHVASATPTIRCAMDGGGGGIRRRDVLTCFGATVGLEVVGSSGSFLETASAADLIQRRQRSDFQ
TIIKDTLFTAIKGNPEVIPSLLTLALNDIMTYDKATKSGGPNGSVRFSSEMSRPENKGLSVALDLLGEAKKEIDSNSKGGPISFADLIQFGAQSALKATFLASAIRKCGGNEEKGSLLYR
AYGSTGQWGLFDRQFGRTDAEEADPEGRVPQWDKASVQEMKDKFVAVGLGPRQLAVMSAFLGPDQAATEAMLATDPDVLPWVQKYQRSRETVSETDYEVDLITALTKLSSLGQNINYEAY
TYAVPRIDVSKLKL*

Retrieve as FASTA

Remarks

Complete sequence from genomic. Incorrect prediction. Extra 5' end.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAGTGTTACAACTCAGAAGTCATATCCTCCTTTGGCTGTAAAAGCAAGGAAGCAGGCAGCTATGGGAGTTTCATTCTTGTCAACGACTGTTGTCCCTTCTCTGCATCATATCCCATTC
CTAAGCTCCTCCTCCTCCAATGCTGCTGCTTCTTCTGTTTCCTCCTCTAGACATGTTGTGAATTTCTTTCTCTTCCTCATTGGGATATTGTTTTCATTGAGAATGCTGATGTTGAAATTT
GATGCAGGCGCTTCTGCTACTCCTACAATTCGGTGTGCTATGGATGGAGGTGGTGGTGGCATCCGGAGAAGAGATGTTTTGACATGCTTTGGTGCTACAGTTGGCCTGGTAATCTTTCTG
ATTTCATTTTGGAATGTAGTTTCTTTTCCATCAGTGATATGATCTCTCACAGTTGTCGAATGCTTAGGAGAAGTTGTGGGAAGCTCAGGATCGTTCCTGGAAACTGCTAGCGCTGCTGAC
CTCATCCAACGCAGACAAAGATCAGATTTCCAGAGTAAGCAACAGTATAATGGCAACTTTTTCAACTCTCAAGTTTATACTGATTACTGAAAGTTCACGTCTTTTTTTTTGTTTGATCTC
ACAGCACAATCATTAAGGATACTCTTTTCACAGCAATTAAGGTACAATAACACTGTTTCCGCAAACAGTATCATAATGAGCATTAATAACATAAATACTACAAACATGACATTGCAGGGG
GAAATCCTGAAGTCATCCCATCTTTATTGACTTTGGCTCTCAACGACATTATGACTTATGACAAGGTCAGGCATCTTCTTTATAGTGCCTTCCTGGGTAAAGCATTCTGATTTGGATTCA
AGTAAAAACAGCTATTAATCATCTTGCGAAGATGTGGTTTAAGTTTGCAGGCGCTACCAAATCTGGAGGACCAAACGGATCAGTACGATTCAGGTATAATATGCTGTATATTGGCAACGT
CAAAGATATCGTACTCTGTTTTCTCAAAATGTTGTGGTTGCTGTCAATGAAGCTCTCAGAGATGAGCAGACCTGAAAACAAGGGACTTTCTGTGGCTTTGGATTTACTAGGAGAAGCAAA
GAAGGAGATTGATTCCAATTCCAAGGGTGGTCCTATCTCCTTTGCTGATCTTATCCAATTTGGAGGTTTGTTTGTATTTTGTTTGATACTCCAGTCATTCCCATTTTCACTCGGTTCTAA
ACCTGATTATATGTATGTTTCGATAAAGCACACAAAGTGCTCTCAAGGCTACATTCCTGGCATCAGCAATTCGAAAGTGTGGCGGAAACGAGGAGAAAGGTTCATTGCTCTACAGAGCTT
ACGGCTCCACTGGCCAGGTAACTGCTTCTCAGTTCCTCATATCGATCGCAACATGTCACAGTCTACGAAGTTTAATTACGTACGTGACAAGTCGGTTCTGTTGAAATTGACTTTGCTCAA
GGACAGTGTGGGGGCTATTCGATAGGCAGTTTGGAAGGACAGATGCAGAAGAGGCGGATCCAGAAGGAAGAGTTCCTCAATGGGATAAAGCTAGTGTGCAGGAAATGAAAGACAAGTTTG
TAGCGGTTGGCCTTGGTCCTCGCCAGGTACTTATAACTGCTGCTCTCACGTATGCTTTGGCATCTAGAATCATGTTTCTTAAGAAAGTTGAATTGAAGTTGGTTGAGGTTGGAAGAGGTT
GTGGAAGGAAAGTTGAATAGAGTGATAGAAGAGATCCCAAGTGGAATTGTGTTTCACGATCTACTAAACTGGAAATGAAGTTTCATCGGAATCATTTTTTATATCCTTTGGACTCGATTC
GGCAATAAAAATCATGATTCATAGAAAAGTTGAGTTAAACTAGTTGAAAAAAAGTTGAGTCGAGGATAAAAAGGGTTGTGGAAAGAATGATAAATTAAAGGATACAAATGATTCATTGGA
AAGTTTAATTTCCCTTTGAGTAGATTGAGAAATACATTTCCACTTGGAGTCCGTCCTCTTTTTCCAAGTATGATTTTCAATTCTAACTCAACTTTCTTATACTAATCTTAACTTAATTTC
TTTACGAATTGTAATTTTTGCTGCCAAACCAAGTCTTAATTCAATTTTCCTTCTACGGACCCTCTCAACCTCAACTCAACTTCCTTCCACTTATCTGAATTCAACTTTCGTAGGGATCAT
GATTTTGGATGCCAAACCTTAGCTCAATCATCTCCCAAGAAGATAGTATAGGCCGTAAATGTGATTGTGTTTGTTCGCTTTGGTTTTGCTGGTATGGTATTTTTGCAGCTCTGGCTGTTA
TGTCCGCATTCCTGGGGCCTGATCAAGCTGCCACAGAGGCGATGCTGGCCACAGACCCTGACGTCCTGCCGTGGGTTCAGAAGTACCAGCGCAGTCGAGAGACCGTGTCCGAGACAGATT
ACGAGGTTATATCTTCCCTATAAAATCCCAACTCTTCATCTAGCTACTTCAATATATTGACTCTGCATTTCTGACTCAGTATGGATTGACTTGACGACATGCTATTACAGGTGTTGATCT
CATTACCGCTCTAACGAAATTAAGCAGCCTGGGCCAAAACATCAATTATGAGGCCTACACCTATGCTGTCCCAAGGATCGATGTGTCCAAACTCAAGCTGTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA