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Entry information : LuAPx79(Lus10014128|PACid:23156862)
Entry ID 12042
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-11 (Qiang Li)
Peroxidase information: LuAPx79(Lus10014128|PACid:23156862)
Name LuAPx79(Lus10014128|PACid:23156862)
Class Ascorbate peroxidase    [Orthogroup: APx2003]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuAPx79
start..stop		 S start..stop
LuAPx104 575 0 1..286 1..286
LsaAPx02 484 2.44e-175 1..285 1..285
HaAPx03 478 5.67e-173 1..285 1..285
CiAPx02 478 6.69e-173 1..282 1..282
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12042' 'join(522860..522972,523055..523179,523303..523352,523891..523956,524049..524097,525099..525181,525268..525347,525443..525545,525931..526119)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 522860..522972 111 N° 2 523055..523179 123 N° 3 523303..523352 48 N° 4 523891..523956 64
N° 5 524049..524097 47 N° 6 525099..525181 81 N° 7 525268..525347 78 N° 8 525443..525545 101
N° 9 525931..526119 187  
join(522860..522972,523055..523179,523303..523352,523891..523956,524049..524097, 525099..525181,525268..525347,525443..525545,525931..526119)


exon

Literature and cross-references LuAPx79(Lus10014128|PACid:23156862)
DNA ref. Phytozome 12:   scaffold1247 (522860..526119)
Protein sequence: LuAPx79(Lus10014128|PACid:23156862)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   285
PWM (Da):   %s   31320.08 Transmb domain:   %s   o256-278i
PI (pH):   %s   7.75
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAYPVVDAAYVKEVDKARRDLRALISSKNCAPIMLRLAWHDAGTYDKNTKTGGPNGSIRNDEELAHGANSGLKIALDFCEEVKAKHPKITYADLFQLAGVVAVEVTGGPTIDFLPGRKDS
KISPKEGRLPDAKQGSMHLKDVFHRMGLSDKDIVALSGAHTLGRAHSNRSGFEGPWTKEPLKFDNTYFVELLKGETEGLLKLSTDNALLDDPAFRPFVELYAKDEEAFFKDYASAHKKLS
ELGFSPSSKVTQKDSTVLAQGAVGIVVTAAVMFFSYMYEVHRRSK*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTACCCCGTCGTCGATGCCGCTTACGTCAAGGAAGTTGACAAGGCTCGCCGCGATCTCCGTGCTCTCATCTCCTCCAAGAACTGCGCTCCGATCATGCTCCGCTTGGCGCGTAAC
CGTCCTATTGCTGTTTTCGTTTTCTCAATTTGACTTGCTTGTTGGTTTCCTGATCTTCGCCCTTGGTAAATTTTCAGTTGGCACGACGCCGGGACGTATGATAAGAACACCAAGACCGGT
GGACCTAATGGCTCCATTAGGAACGACGAGGAGCTGGCTCACGGTGCTAACAGTGGCTTGAAGATCGCTCTCGATTTCTGCGCGGTGAGATTGATGTCTTTAGTTTGTTTATCACAATTT
TAATATGTTTGTTGGGAGCGATATCTGCCCGTTCGTCTTCGAGTGATGATCGATTGCTGAACTGAGTGTTCTTACCTTGCTCTGTAGAGGAAGTGAAGGCCAAGCATCCTAAAATCACTT
ACGCCGATTTGTTCCAGAGGTGATTGCTTTTGATGAGTTTGCTTGCTTTCTGCTGTAGACGTTCTCTCCCGAGCTGTTTGTTTGAATTGTGAGACTTATAATTCTTTTGCACTGGATATC
CTACTGCTAGATGGTAGTGAAGTGTGAAGGATTTGGTTAGCAGTATTATTTACCCATATGTATTGCATGATTAGAAATCTTAAGAAAAGTTTAGAAACACGACTTTCATCTACATTCCTC
TGATAAATTAGTCAATGTTTGCTCAATCAGAAGCAAGTTTATAGTTCTATATAAAAGTAGCTGAGGTCCGCTTTTCTTATAGTTAATTCCAAGGCGATTACAAAGGACGCCAATCACGTC
TTGTTCTCTAGCAGTATCTTTGTGCTTCTAGTTTCTTGTTCATTACTTTGACAGAACACAGTGCCCAAGTTTAGATTATCATACTTGTCCAAAAAAAAAGTTTAGATTATCATCTGATGA
CTGAGAGTTGACAACTGCTCTTGAATTAGAATTTATTTTTTGTTACCAACTAATTCGGTTTTCATGCATCACTGTAGCTGGCTGGTGTCGTTGCAGTTGAGGTAACTGGAGGTCCAACCA
TCGACTTTCTCCCTGGCAGGAAGAGGTATGTGAACGTTGGCTAATAGTTATACAACTTCAATGTATTTAGTCGATTACGTTTTTTGAAGTTACTGACTGAGATGTTCTGTATATCAGGAT
TCAAAAATTTCCCCCAAGGAAGGGAGACTTCCGGATGCCAAACAAGAGGTATAAGCGATTAAAGATATTAGCTCTTGATTTACACAGTTATCACCAATATTTGTCACTGATCATTAATTC
TATGTTACTTGATCTCCTTGAAATCCCTAGCTTTCCTCTCTCTCTTTGTATGAGGATGGCGGCAGTAGTTTATGATGGTGGAACAAATTTAGAGTTTGTTAACATTCTCAGAAGAAATTT
CCTTCATCATCACTGATTTAAGTGTTTCCTTTAACATATTGTTGGAAAGCCAATTCATTTGAACTAAGTCCATGGCACGAGTTTTCTTGTTCCTTGAATCAATCTTTCCAAGTGTTGGTG
TTTGTAAGAATTTTCTTTGAAATATCCTTGAGGATGCAGCCCTAGGTGATGCTTTTGATTTTTCTTGAGGTATCTTTCTGTGATCTTAGTATCTCCTGGGCTCTCAGATTTTTATTTGCA
TTCCTAGGACATAACTGGCCTCTGATACCCTCCGAGTAACGTTTATGTTCATTGAAGAAAGAGCTATGCATTGGTCTTGTTGTCCTAAATCAGACTACTTGTTTTCGTAACTGACTATCT
ATTTCCTAACCTAGACACCTAGTGGAAGCATGCGCGGCTTGAATTTATGATTCCAAGGCTTAGTAGCTTTCGCCTTATGTAGATTGCCAAGGGTCATCCATGAGAATTCATATAGTGTAT
TAAGGTGAAGTGCAACACTGTTTTTTTATGTGATCATTGAAACGTTTCTTGTTGGTCATGGCCTACCTAGTTCTTAGCGTCCCATTTTGCTATCTTCATTGCAGGTTACTTGTTCTCTTA
CCTAGTTAATTCACCTTGTGGATTATCTCACCTTTGCTGCGAATGACTGTCCTTCATTTCATTATTATTCGGTAGAATCAGTAATTCAACTCCTGATAGACCCTTGATATTCTGCCTGTT
CTTTTTGCAACTATATATATAGGTGAGAATTCTGCATGATTACAAAATTGTTGGATTCATTCTACATATTCTGGTTAATTTTGTGCTAGGTTCAATGCATTTGAAAGACGTATTCCATAG
GATGGGTCTGTCTGATAAGGATATTGTAGCACTGTCAGGAGCCCATACTCTGTGGTAATTTCCTACTACTTATCTTTTTTCCTTTACCAATACTAGAATAAACAAACCTTAACTTTCAAG
TCTAAATGGTGTTTCTGCAGGGAAGGGCACATTCAAATAGATCAGGCTTTGAAGGCCCATGGACCAAGGAACCACTGAAGTTTGACAATACATATTTCGTGTGTAAGCTTCTGAATTCAC
AGTAGACTAGCATTGGTCACAGAAATCGTGCAAAAATCACCCGGTTCAAAATCATAATTCCATGTCTGATATTCCAGGGAACTGCTGAAGGGTGAGACTGAGGGACTACTCAAACTCTCA
ACTGACAACGCCTTGTTGGATGATCCAGCTTTCCGTCCTTTCGTTGAGCTTTATGCAAAGAGGTAGGGCTACAAACATTTCGTTTATCAAGTTTTCTCTCTTCATTTGCTCGATCTTCAC
ATCCAAACTCAGTATTCTTTATCCTTCATAATACTAGAAATCATTCTGGCTTCCCTAAGCTGTAGAGTATAGATTCGCACTCGGAGATATTTTTGGCCGTGGTTTTGGACTTTTGGTCAC
AGGTTCCGTTTGTTCTCCATAGTCCATCCAACTTCTTTTTTCGAGTAAAACTAATACCATAAATACATACAGTAGTCTCTGGAATCTGTACTGTCGTTTTCTTGACACGTAACTAGAAGT
ATATATCTGAAACCAAAATAGCATCAAATTCGTGGCTTGGCCAGTATGTTTATATGCATGATGCTTGATTTGGCTTGTTATTGGCAGGATGAGGAAGCATTCTTCAAGGACTACGCTTCC
GCGCACAAGAAACTCTCCGAACTTGGCTTTTCCCCATCCTCGAAAGTAACTCAGAAAGACAGCACCGTACTGGCACAGGGAGCAGTTGGAATAGTGGTAACTGCTGCAGTTATGTTCTTC
AGCTACATGTACGAAGTCCACAGGCGATCCAAGTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTACCCCGTCGTCGATGCCGCTTACGTCAAGGAAGTTGACAAGGCTCGCCGCGATCTCCGTGCTCTCATCTCCTCCAAGAACTGCGCTCCGATCATGCTCCGCTTGGCTTGGCAC
GACGCCGGGACGTATGATAAGAACACCAAGACCGGTGGACCTAATGGCTCCATTAGGAACGACGAGGAGCTGGCTCACGGTGCTAACAGTGGCTTGAAGATCGCTCTCGATTTCTGCGAG
GAAGTGAAGGCCAAGCATCCTAAAATCACTTACGCCGATTTGTTCCAGCTGGCTGGTGTCGTTGCAGTTGAGGTAACTGGAGGTCCAACCATCGACTTTCTCCCTGGCAGGAAGGATTCA
AAAATTTCCCCCAAGGAAGGGAGACTTCCGGATGCCAAACAAGGTTCAATGCATTTGAAAGACGTATTCCATAGGATGGGTCTGTCTGATAAGGATATTGTAGCACTGTCAGGAGCCCAT
ACTCTGGGAAGGGCACATTCAAATAGATCAGGCTTTGAAGGCCCATGGACCAAGGAACCACTGAAGTTTGACAATACATATTTCGTGGAACTGCTGAAGGGTGAGACTGAGGGACTACTC
AAACTCTCAACTGACAACGCCTTGTTGGATGATCCAGCTTTCCGTCCTTTCGTTGAGCTTTATGCAAAGGATGAGGAAGCATTCTTCAAGGACTACGCTTCCGCGCACAAGAAACTCTCC
GAACTTGGCTTTTCCCCATCCTCGAAAGTAACTCAGAAAGACAGCACCGTACTGGCACAGGGAGCAGTTGGAATAGTGGTAACTGCTGCAGTTATGTTCTTCAGCTACATGTACGAAGTC
CACAGGCGATCCAAGTAG

Retrieve as FASTA