Entry information : LuPrx05(Lus10000003|PACid:23170978)
Entry ID 12061
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx05(Lus10000003|PACid:23170978)
Name LuPrx05(Lus10000003|PACid:23170978)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx05
start..stop
S start..stop
LuPrx131 135 4.22e-41 1..68 269..336
PtPrx24 116 4.62e-34 1..65 258..322
RcPrx77 112 2.41e-32 1..65 259..323
PtPrx23 110 9.51e-32 1..65 258..322
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12061' 'join(50148..50351)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 50148..50351 202  
join(50148..50351)


exon

Literature and cross-references LuPrx05(Lus10000003|PACid:23170978)
DNA ref. Phytozome 12:   scaffold200 (50148..50351)
Protein sequence: LuPrx05(Lus10000003|PACid:23170978)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   67 (341)
PWM (Da):   %s   7229.58 (36361.6)  
PI (pH):   %s   8.53 (4.45) Peptide Signal:   %s   cut: 27 range:27-367
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MQRRGLLQSD QVLFSGGSTD GIVQEYSRNP RVFTSDFAAA MVRMGDIEPL TGSQGQVRRV CSVANAA* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Big 5' end is missing. Incorrect prediction.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGAGGA GGGGGCTACT CCAATCGGAT CAGGTGCTTT TCAGCGGCGG TTCCACCGAC GGGATAGTGC AAGAGTATAG TAGGAATCCC AGAGTTTTCA CCTCCGATTT CGCGGCTGCT 
ATGGTTCGGA TGGGTGATAT TGAGCCCTTG ACTGGTTCTC AGGGCCAAGT TCGCAGAGTT TGTAGCGTAG CCAACGCCGC CTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGAGGA GGGGGCTACT CCAATCGGAT CAGGTGCTTT TCAGCGGCGG TTCCACCGAC GGGATAGTGC AAGAGTATAG TAGGAATCCC AGAGTTTTCA CCTCCGATTT CGCGGCTGCT 
ATGGTTCGGA TGGGTGATAT TGAGCCCTTG ACTGGTTCTC AGGGCCAAGT TCGCAGAGTT TGTAGCGTAG CCAACGCCGC CTGA 

Retrieve as FASTA