Entry information : LuPrx10(Lus10000625|PACid:23147723)
Entry ID 12063
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx10(Lus10000625|PACid:23147723)
Name LuPrx10(Lus10000625|PACid:23147723)
Class Class III peroxidase     [Orthogroup: Prx018]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx10
start..stop
S start..stop
LuPrx31 258 3e-88 1..134 189..322
LuPrx07 253 3e-85 1..128 189..316
EgrPrx191 209 3e-69 1..134 186..317
EcamPrx191 209 4e-69 1..134 186..317
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 40941..41345 405  
complement(join(40941..41345))


exon

Literature and cross-references LuPrx10(Lus10000625|PACid:23147723)
DNA ref. Phytozome 12:   scaffold542 (41345..40941)
Protein sequence: LuPrx10(Lus10000625|PACid:23147723)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   134
PWM (Da):   %s   14697.2  
PI (pH):   %s   9.74
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTVLSGGHTV GQARCTTFRN RIYNETNIGQ NFATNRRANC PATAGTGDGN LAPLDFSPNR FDNAYYRELV GQRGLLHSDQ QLFSGGSQDA LVRTYSTNVN AFARDFANAM IRMGNLSPLT 
GTNGEIRRNC RLIN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCGTCC TGTCCGGCGG CCACACCGTC GGCCAAGCCC GGTGCACCAC TTTCCGCAAC CGGATCTACA ACGAGACCAA CATCGGACAG AACTTTGCCA CCAACAGGAG GGCGAACTGC  CCTGCCACTG CTGGCACGGG AGACGGGAAC TTGGCCCCAC TCGACTTCTC TCCGAACAGA TTCGACAATG CTTATTACAG GGAGCTTGTG GGCCAGCGTG GGCTACTGCA CTCCGACCAG  CAGCTGTTCA GCGGTGGGTC CCAAGATGCT TTGGTCAGGA CTTATAGTAC CAATGTCAAT GCATTTGCTA GGGATTTCGC AAATGCCATG ATTAGGATGG GGAACCTTAG TCCTCTTACT 
GGGACTAATG GCGAGATTAG ACGTAATTGC AGGCTTATTA ACTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCGTCC TGTCCGGCGG CCACACCGTC GGCCAAGCCC GGTGCACCAC TTTCCGCAAC CGGATCTACA ACGAGACCAA CATCGGACAG AACTTTGCCA CCAACAGGAG GGCGAACTGC  CCTGCCACTG CTGGCACGGG AGACGGGAAC TTGGCCCCAC TCGACTTCTC TCCGAACAGA TTCGACAATG CTTATTACAG GGAGCTTGTG GGCCAGCGTG GGCTACTGCA CTCCGACCAG  CAGCTGTTCA GCGGTGGGTC CCAAGATGCT TTGGTCAGGA CTTATAGTAC CAATGTCAAT GCATTTGCTA GGGATTTCGC AAATGCCATG ATTAGGATGG GGAACCTTAG TCCTCTTACT 
GGGACTAATG GCGAGATTAG ACGTAATTGC AGGCTTATTA ACTAA 

Retrieve as FASTA