Entry information : LuPrx108(Lus10020097|PACid:23142012)
Entry ID 12068
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx108(Lus10020097|PACid:23142012)
Name LuPrx108(Lus10020097|PACid:23142012)
Class Class III peroxidase    [Orthogroup: Prx028]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx108
start..stop
S start..stop
LuPrx141 617 0 1..332 1..332
PtPrx52 469 1e-167 6..325 3..333
RcPrx44 467 4e-167 11..325 14..326
PtPrx79 457 3e-163 6..325 3..331
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 22406..22618 213 N° 2 22710..23055 346 N° 3 23825..24264 440  
join(22406..22618,22710..23055,23825..24264)


exon

Literature and cross-references LuPrx108(Lus10020097|PACid:23142012)
DNA ref. Phytozome 12:   scaffold454 (22406..24264)
Protein sequence: LuPrx108(Lus10020097|PACid:23142012)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (308)
PWM (Da):   %s   35487.76 (32873.4)  
PI (pH):   %s   4.68 (4.67) Peptide Signal:   %s   cut: 25 range:25-332
Sequence 374
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDSSSTSPVPFLLLILILPNCSSATLSFDFYSSSCPAVDMIVSNTVRTASSDDPSIPGKLLRLLFHDCFVDGCDGSVLLEGNSTERSDPANGSLGGFEVIDSAKRVLEVFCPGIVSCADILALAARDAVVISGGPNTQIPTGRRDGLVSSVLNVRPNIVDTSFTMPEMVKIFSSKGLSLDDLVILSGAHTIGSAHCGAFIDRFHKDPKGKLNGIDSSLDANYAKDLIQKCPAGANNPSLKVANDPETSSVFDNQYYRNLLGHKGLFQSDSVLLEDKQASKLVRDLAADEEAFFERWSESFVKLTSVGVKTGEEEGEIRASCSVTNSNMNKKK*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATTCTTCATCAACCTCACCGGTCCCATTTCTGCTCCTTATTCTCATTCTCCCCAACTGTTCTTCTGCGACACTGTCCTTCGACTTCTACTCATCCTCCTGCCCTGCCGTCGACATG
ATTGTATCCAACACAGTCAGGACAGCTTCCTCCGACGACCCATCTATCCCCGGGAAGCTCCTCCGCTTGCTCTTCCACGACTGCTTTGTTGAC
GTAAGTAAGACCATAGATAAAGATTCA
GACTTTAATTAATTTGCTGCTTCCAAACTTACTGGATAATTATAAAGGTACAATCTTTTTCCAGGGTTGCGATGGATCTGTGCTTCTGGAAGGGAACTCGACGGAGAGGAGTGACCCGGC
TAACGGGTCGCTCGGAGGGTTCGAAGTGATCGATTCGGCGAAGAGGGTGCTGGAGGTGTTCTGCCCTGGCATTGTATCTTGTGCTGATATTCTGGCTCTGGCTGCCAGAGATGCGGTTGT
AATCTCTGGAGGACCGAATACTCAAATTCCGACTGGGAGAAGAGATGGTTTGGTTTCCTCGGTGTTGAATGTTAGACCAAACATTGTGGACACTAGCTTCACCATGCCTGAAATGGTCAA
GATTTTCTCCTCCAAAGGTCTCTCTCTTGATGACCTCGTCATTTTATCTG
GTAAGTCTATTTGCCCCACTCCACTCTCGATCTCAAACATTGAAATTTATATATTAGTGATTTTTTTCAA
ATTTGGTCGAGTGTATTTTTAACTTCGACTTAGTGTTTGACCATAAACCGAATAAGGAGTCATGAAGAGTTTCCACTCTCTTTTCTCAGTTTTGAATACTAAATCATATATAAAATTTAG
ATATTTTCATTATTTAACTAAATTATATATAAAGTTCTATTCTCTTATTTATTTGCTTCGAACATATATCTATTAAATTCAATTGTTACCATAATCAACTACTAACCATACAAAATAGAC
CAAATTCAGAAAAACTAAACCCCGGGTGGCACGTTGAAATCGGCTAAAAACTAAACCCCGGGTGGCATGAATAGTTTTTTTGTATACATTAACTTAGACTTTGTTTCTACTAAAAGTGGC
CATTGTTAAGGTTTAGGGGGAAGGTTTGTCGGTTTGTTTCGCCATAGTTAGGGTTTAGGGGCAAGTTTGTCGGATTTGATAAATCTGATAGAATTAGGGTTGTTATTTTGTGGCCGTGGA
AAAAATATTAATTGGTTGGATGTGCAAAATTAAATCCAATTCCAGCTATTTGGCTCATTAAAATAGGTTTAGGAAAATGAATTCGTCATTCTATTAAAAAAATTCAATAACATTAGAAAT
TTTCGATACATGTTTCAATCTTCGTGATACCCCGATACATTGAGTAAGTTTTGGAGCTTAATTAATAAGGAGGGCTTGTTTGTTTTTTTTAAACTTCAGGAGCTCACACAATAGGATCAG
CCCATTGCGGAGCATTCATCGACCGGTTCCACAAAGATCCCAAAGGGAAACTGAATGGGATCGACTCCTCATTGGACGCTAACTACGCAAAGGACTTGATCCAGAAATGCCCAGCCGGAG
CCAATAACCCATCACTAAAGGTTGCGAATGACCCCGAAACCTCGTCGGTGTTCGACAACCAGTATTACAGGAACCTGTTGGGACACAAGGGTCTTTTCCAGTCAGATTCAGTGCTGTTGG
AGGACAAACAGGCGAGTAAGTTGGTGCGAGATTTGGCAGCAGACGAGGAGGCGTTTTTCGAGAGGTGGAGCGAGTCGTTTGTGAAGCTTACTAGTGTCGGTGTGAAGACCGGCGAGGAAG
AAGGAGAAATTCGAGCTTCTTGTTCCGTTACTAATAGTAATATGAATAAGAAGAAGTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATTCTTCATCAACCTCACCGGTCCCATTTCTGCTCCTTATTCTCATTCTCCCCAACTGTTCTTCTGCGACACTGTCCTTCGACTTCTACTCATCCTCCTGCCCTGCCGTCGACATG
ATTGTATCCAACACAGTCAGGACAGCTTCCTCCGACGACCCATCTATCCCCGGGAAGCTCCTCCGCTTGCTCTTCCACGACTGCTTTGTTGAC
GGTTGCGATGGATCTGTGCTTCTGGAA
GGGAACTCGACGGAGAGGAGTGACCCGGCTAACGGGTCGCTCGGAGGGTTCGAAGTGATCGATTCGGCGAAGAGGGTGCTGGAGGTGTTCTGCCCTGGCATTGTATCTTGTGCTGATATT
CTGGCTCTGGCTGCCAGAGATGCGGTTGTAATCTCTGGAGGACCGAATACTCAAATTCCGACTGGGAGAAGAGATGGTTTGGTTTCCTCGGTGTTGAATGTTAGACCAAACATTGTGGAC
ACTAGCTTCACCATGCCTGAAATGGTCAAGATTTTCTCCTCCAAAGGTCTCTCTCTTGATGACCTCGTCATTTTATCTG
GAGCTCACACAATAGGATCAGCCCATTGCGGAGCATTCATC
GACCGGTTCCACAAAGATCCCAAAGGGAAACTGAATGGGATCGACTCCTCATTGGACGCTAACTACGCAAAGGACTTGATCCAGAAATGCCCAGCCGGAGCCAATAACCCATCACTAAAG
GTTGCGAATGACCCCGAAACCTCGTCGGTGTTCGACAACCAGTATTACAGGAACCTGTTGGGACACAAGGGTCTTTTCCAGTCAGATTCAGTGCTGTTGGAGGACAAACAGGCGAGTAAG
TTGGTGCGAGATTTGGCAGCAGACGAGGAGGCGTTTTTCGAGAGGTGGAGCGAGTCGTTTGTGAAGCTTACTAGTGTCGGTGTGAAGACCGGCGAGGAAGAAGGAGAAATTCGAGCTTCT
TGTTCCGTTACTAATAGTAATATGAATAAGAAGAAGTGA

Retrieve as FASTA