Entry information : LuPrx109(Lus10020311|PACid:23144075)
Entry ID 12069
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx109(Lus10020311|PACid:23144075)
Name LuPrx109(Lus10020311|PACid:23144075)
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx109
start..stop
S start..stop
LuPrx30 231 5e-77 4..129 69..194
LuPrx110 158 2e-48 4..128 54..175
RcPrx60 152 1e-46 4..128 48..168
LuPrx29 152 2e-46 4..128 54..175
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 338378..338827 450  
complement(join(338378..338827))


exon

Literature and cross-references LuPrx109(Lus10020311|PACid:23144075)
DNA ref. Phytozome 12:   scaffold641 (338827..338378)
Protein sequence: LuPrx109(Lus10020311|PACid:23144075)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   149
PWM (Da):   %s   15555.98  
PI (pH):   %s   7.96
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFVDPSVTAA LLRIHFHDCF SKGCDASILI HPTPQNPTPQ KTAPPNRSVR GFNIIDAVKG ALELACPATV SCADAIALAT GDAVALSSGG GIRYSVPTGR LDELLSTVAN VKLPAPTQSV 
YLAFSQFFST FESPAPKFRE KSLSISSSL 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. Short PS.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCGTCG ATCCATCCGT CACCGCCGCC CTCCTCCGCA TCCACTTCCA CGACTGCTTC TCCAAGGGCT GCGACGCGTC CATCCTGATC CACCCGACGC CGCAAAACCC GACCCCACAA  AAGACGGCGC CGCCGAACAG GTCCGTACGA GGTTTCAACA TCATCGACGC CGTCAAAGGT GCTTTAGAGC TCGCCTGCCC TGCCACCGTC TCGTGCGCTG ATGCTATCGC GCTCGCCACG  GGTGACGCAG TCGCTCTATC CTCCGGCGGA GGCATTAGGT ACTCCGTCCC GACAGGACGG CTCGACGAGC TTCTCTCCAC GGTCGCCAAC GTCAAGCTGC CGGCGCCGAC TCAGTCTGTT 
TACTTGGCCT TCAGTCAGTT TTTCAGTACG TTCGAGTCCC CTGCACCCAA GTTTAGAGAA AAAAGTCTAT CGATAAGCTC GAGCTTGTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCGTCG ATCCATCCGT CACCGCCGCC CTCCTCCGCA TCCACTTCCA CGACTGCTTC TCCAAGGGCT GCGACGCGTC CATCCTGATC CACCCGACGC CGCAAAACCC GACCCCACAA  AAGACGGCGC CGCCGAACAG GTCCGTACGA GGTTTCAACA TCATCGACGC CGTCAAAGGT GCTTTAGAGC TCGCCTGCCC TGCCACCGTC TCGTGCGCTG ATGCTATCGC GCTCGCCACG  GGTGACGCAG TCGCTCTATC CTCCGGCGGA GGCATTAGGT ACTCCGTCCC GACAGGACGG CTCGACGAGC TTCTCTCCAC GGTCGCCAAC GTCAAGCTGC CGGCGCCGAC TCAGTCTGTT 
TACTTGGCCT TCAGTCAGTT TTTCAGTACG TTCGAGTCCC CTGCACCCAA GTTTAGAGAA AAAAGTCTAT CGATAAGCTC GAGCTTGTAG 

Retrieve as FASTA