View Redoxidase 12075

Entry information : LuPrx117(Lus10020994|PACid:23182345)

Entry ID	12075
Creation	2013-05-28 (Qiang Li)
Last sequence changes	2013-05-29 (Qiang Li)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-05-30 (Qiang LI)

Peroxidase information: LuPrx117(Lus10020994|PACid:23182345)

Name

LuPrx117(Lus10020994|PACid:23182345)

Class

Class III peroxidase [Orthogroup: Prx024]

Taxonomy

Eukaryota Viridiplantae Streptophyta Linaceae Linum

Organism

Linum usitatissimum (flax) [TaxId: 4006 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	LuPrx117 start..stop	S start..stop
LuPrx126	574	0	1..341	1..318
PpePrx08	463	1.94e-165	35..340	27..332
NtPrx36-1B	462	3.53e-165	34..341	20..328
MePrx117	462	4.57e-165	1..341	1..334

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	14223..14480	256	N° 2	13638..13829	190	N° 3	13366..13531	164	N° 4	12874..13280	405
complement(join(12874..13280,13366..13531,13638..13829,14223..14480))

Literature and cross-references LuPrx117(Lus10020994|PACid:23182345)

DNA ref.	Phytozome 12: scaffold155 (14480..12874)

Protein sequence: LuPrx117(Lus10020994|PACid:23182345)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	340 (314)
PWM (Da):	36748.18 (33750.7)
PI (pH):	6.88 (6.74)	Peptide Signal:	cut: 27 range:27-340

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSYTNFLAFTTSLLVIAFSTLHQVTPFPSSSSSSPSSSGPLDYSYYDQSCPRLSMIVRYGVWSAVNNESRIAASLLRLHFHDCFVNGCEGSILLDDTVGFKGEKNAQANRGSARGYEVID
NIKADVEKACPGTVSCTDILALAAREAVVLTGGPYWPVALGRRDTLTASEAAVGQQLPSPIESLDAITAKFNSKGLDLKDVVVLSGAHTLGFAQCFLIKRRLFNFKESGKPDPALDSSAL
TNLQGKCPNKNESNSNLVQLDSTTTRFDNMYYTNLVNNAGLLDSDQALLMNPTTGDMVRSYSSNQYSFYSDFKASMMKMGSVGVLTGKDGEIRRKCGSVN*

Retrieve as FASTA

Remarks

Complete sequence from genomic. Correct prediction.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAGTTACACAAACTTCTTAGCCTTCACTACTTCACTTCTTGTTATAGCTTTCTCTACACTTCATCAAGTCACTCCTTTCCCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCCGGACCT
CTCGATTACAGCTACTACGACCAATCGTGCCCTCGTCTATCCATGATCGTTCGATACGGTGTATGGTCGGCGGTCAACAATGAGTCCAGAATTGCTGCTTCGTTGCTCCGTCTACACTTC
CACGATTGTTTTGTCAATGTAAATATACATTCAAATATTCACTACTACAAAAAACTAGTCATTTAACCATCTATCTTTTATTTTATTACCAAACGGATGTTAAAGAGTATAACGTTAAAA
ATCTTAACATGTGACGTAGATTGCTAATTTTAACAGTGGTTAGAATCCGTTGATAAATAGTCAGTTTGGGGGCATGCTCTTAAATGACTCATCTAAGAGCGGTTGGTAACTGGATGTTAA
ATACACTCACTTTAAGAACGATCATTCACTAAAAAGGTCCACACCTAACAATACCGGTCCTTTGGCTACTGTTAAAAGTCGTCGTTAAATGAGCCTAGTTTATTGTATTGATCTCTCCGT
TTCACTAACTATAGAGTCTCGATTTTGACTACCATGTTCACGATGTAATAGGGGGGTGCGAGGGTTCGATCCTGCTGGACGACACGGTAGGTTTCAAAGGGGAGAAGAACGCACAAGCGA
ATCGTGGTTCAGCTAGAGGGTACGAGGTTATAGACAACATCAAAGCTGATGTCGAGAAGGCTTGTCCAGGCACGGTCTCATGCACCGACATACTGGCTCTAGCAGCAAGAGAAGCTGTTG
TTTTGGTAAAAAAAAAGATTGCTTAATCAACTATAATAATCACATTGGATTATCGATACTAATAGACCCAACACTGATGAGCCATTGAACCAAATTCTGACGTTTTTCCAGACACAGGAG
GGCCTTATTGGCCAGTTGCATTAGGGAGGAGAGACACGTTGACTGCTAGTGAAGCAGCCGTTGGTCAACAGTTGCCATCTCCTATCGAGTCCTTGGATGCCATCACTGCAAAGTTCAATT
CCAAGGGCCTTGACCTTAAGGATGTTGTTGTCCTCTCAGGTTTGAATCAACTCGAAATGATCCAAAATATCATCGTCCCAACAACTTGAGTTAAATTCCGATTGTACATGATTCGAAATT
GCAGGAGAGCACACACGTTAGGATTTGCACAGTGCTTTCTGATAAAGAGGAGGCTATTCAACTTCAAGGAATCCGGCAAGCCAGACCCGGCACTCGATTCCTCTGCGCTGACGAACCTGC
AGGGGAAATGTCCGAACAAGAACGAGTCGAACTCGAACCTCGTCCAGCTCGATTCGACCACGACCCGGTTCGACAACATGTACTACACCAACCTCGTAAACAATGCTGGCCTGCTGGACT
CGGATCAAGCCCTGTTGATGAACCCGACAACTGGGGACATGGTCCGGTCCTATAGCTCGAACCAGTATTCATTCTACAGCGACTTCAAAGCATCGATGATGAAGATGGGCAGCGTTGGTG
TGCTCACTGGGAAGGATGGTGAGATCAGAAGGAAATGTGGATCTGTGAATTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA