Entry information : LuPrx121(Lus10021957|PACid:23157986)
Entry ID 12078
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx121(Lus10021957|PACid:23157986)
Name LuPrx121(Lus10021957|PACid:23157986)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx121
start..stop
S start..stop
LuPrx208 243 6e-82 2..132 219..349
LuPrx207 155 8e-48 2..132 218..348
LuPrx120 141 4e-42 1..129 219..351
MePrx105 135 4e-40 1..132 214..344
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 744538..744936 399  
complement(join(744538..744936))


exon

Literature and cross-references LuPrx121(Lus10021957|PACid:23157986)
DNA ref. Phytozome 12:   scaffold164 (744936..744538)
Protein sequence: LuPrx121(Lus10021957|PACid:23157986)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   132
PWM (Da):   %s   14332.24  
PI (pH):   %s   9.84
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
VHTIGVSRCG AVIKRLYNFS GAGDTDPAMA PNYAKTLKSK CSNFNPNVQV ELDSGSSNTF DTHSYKALIE KQGLLPSDVT LLSDKRSAEM SRNFVGNEQL FLDKFGKSMV KLGGIGMGVG 
HGEIRKNCRR VN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GTGCACACAA TCGGGGTGAG CCGGTGCGGG GCGGTAATAA AGAGGCTATA CAACTTCTCG GGAGCCGGAG ACACCGATCC AGCCATGGCA CCAAACTACG CAAAAACGCT CAAGTCAAAA  TGCTCGAATT TTAACCCCAA TGTCCAAGTT GAGCTCGACA GTGGAAGCTC GAACACTTTC GATACTCATT CCTACAAGGC CTTGATCGAA AAGCAAGGAC TTTTACCATC AGACGTTACG  TTGCTGTCGG ACAAGCGATC GGCCGAAATG AGCCGGAACT TTGTAGGCAA CGAACAGCTT TTCCTTGATA AATTTGGTAA GTCTATGGTG AAGTTGGGCG GCATTGGCAT GGGAGTTGGT 
CACGGAGAGA TCAGGAAAAA TTGTCGCCGT GTTAATTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GTGCACACAA TCGGGGTGAG CCGGTGCGGG GCGGTAATAA AGAGGCTATA CAACTTCTCG GGAGCCGGAG ACACCGATCC AGCCATGGCA CCAAACTACG CAAAAACGCT CAAGTCAAAA  TGCTCGAATT TTAACCCCAA TGTCCAAGTT GAGCTCGACA GTGGAAGCTC GAACACTTTC GATACTCATT CCTACAAGGC CTTGATCGAA AAGCAAGGAC TTTTACCATC AGACGTTACG  TTGCTGTCGG ACAAGCGATC GGCCGAAATG AGCCGGAACT TTGTAGGCAA CGAACAGCTT TTCCTTGATA AATTTGGTAA GTCTATGGTG AAGTTGGGCG GCATTGGCAT GGGAGTTGGT 
CACGGAGAGA TCAGGAAAAA TTGTCGCCGT GTTAATTGA 

Retrieve as FASTA