Entry information : LuPrx150(Lus10027988|PACid:23181165)
Entry ID 12098
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx150(Lus10027988|PACid:23181165)
Name LuPrx150(Lus10027988|PACid:23181165)
Class Class III peroxidase     [Orthogroup: Prx104]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx150
start..stop
S start..stop
LuPrx43 360 8e-127 7..206 144..343
LuPrx151 287 7e-98 11..206 153..351
LuPrx149 286 1e-97 11..206 149..345
LuPrx42 286 3e-97 11..206 165..363
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 204135..204160 26 N° 2 203045..203178 134 N° 3 202505..202968 464  
complement(join(202505..202968,203045..203178,204135..204160))


exon

Literature and cross-references LuPrx150(Lus10027988|PACid:23181165)
DNA ref. Phytozome 12:   scaffold132 (204160..202505)
Protein sequence: LuPrx150(Lus10027988|PACid:23181165)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   207
PWM (Da):   %s   21936.79  
PI (pH):   %s   4.29
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
METGSSLTMLDSVAANRTLANSELPPPFFTVDQLKATFSAVGLNTTVDLVALSGAHTFGRAQCGSFINRLYNFNGTGSPDPTVNATYLQTLQQLCPQNGTATVLANLDRSTADGFDSTYFANLQTQEGPLDSDQALFSTPNSDTIALVNTFCVNRTAFFESFVNSMIRMGNILPPVGTSGEIRLNFRVINPAASGTAVITTPAGFVC*

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGACCGGATCATCTTTGACAATGTATTTTCTTATTGCTGGATTGTTTTTCCCTTTGAATGGTTTTTCTTTTGCGTCAGATTATGTCGTTATGTTTTTTTGTTTCATTTATTTTCAT
GGTTTTTGCTTGTCGTGTCAGTCTAGAACGTTCAGTCTAGACCCTTGAGATCTACTGGATGCCTACGATATTGAGGAGAGTTAGGTGTAGAGTTAGTTAACTGTCAGGTTAACTACTTCT
CCCATTGTAATATGTTATGCGGATTGCACCTCACAAGTTACCACCTATACAGTGTTCTTCATGTTTTCTTTACAGATTTTGTCTAGGCTTGATAACTAGGCTGGTTACATGTGTGCCATA
TTCCTTTCTCGCCCGTCTCCGACTAGCAGAACTAACGGAGCTACCATCCTGATTTAGCCATGTATTGCAGATTAACTCGAAATAACAGGTTTTACCCGTTAGCCAAAATTGGGGTTATGA
TTTCGTGTGAATAACGCGATGGGGCCAGTTACACCGACCAATGTACGAACTAAAAACACTAATGTAAAAAATCAAGAGATATAATCTAAAAGAACATTATAAATTATTGTGGAAAAATAG
TAAAAACAACAAATTGTTTTTCTAGTAAACTATACGTCTAGTAATGAAAGAACTTCCATTCGCACCCTTCATTATTTTGTAATTATGTTCTTTAATTATACTTTGTTCACGAGACTAAGT
CGGTCTATCTAACTTAATGAGAACAAAACAACTAAAATTTTCATTCTTTCTAAACTTAATCTCGTTGTCGTTGCATGCATGGATGAAATCGAGATTCTGTGTTTTATTTTATTTTATGAC
AACAATATTAGCTGTGTTTTAACACTGCATGCTTACCGAGGGGGATGGATTGTACATTAAAATATACGAATAGTTGTTGTAATGTTTGAATTCGGCTGTCACAATTTTTAAGATTTTAGC
AGATTTAATATCCATTGGGAAGGCTAGACAGTGTAGCGGCAAACAGGACATTAGCAAATTCAGAACTTCCACCTCCGTTCTTCACCGTCGATCAACTCAAAGCTACGTTTTCTGCCGTCG
GCCTCAACACCACCGTAGACCTCGTTGCTCTCTCAG
GTAAACCTTTGAAGTTTGATCACACTCTTCCCAGAAAACTATTTCCAAACTCATTTGGATGGGCTTGGGTCTGCAGGAGCCCAC
ACATTTGGAAGGGCCCAATGTGGAAGCTTCATAAACAGGCTTTACAACTTCAACGGCACAGGAAGCCCAGACCCAACAGTTAACGCCACCTACCTCCAAACACTCCAGCAGCTCTGCCCC
CAGAACGGAACCGCCACCGTTTTGGCCAACCTGGACCGCTCCACCGCCGACGGATTCGACTCCACGTACTTCGCCAACCTCCAGACGCAGGAGGGGCCCCTCGACAGCGACCAGGCACTG
TTCTCCACTCCAAATTCTGACACCATCGCGCTTGTGAACACGTTCTGCGTCAACCGTACTGCTTTCTTCGAGAGCTTTGTTAACTCCATGATTAGGATGGGCAACATTCTTCCTCCGGTT
GGGACCTCCGGCGAGATTAGGCTCAATTTCAGGGTTATTAACCCTGCTGCTTCTGGTACGGCTGTGATTACTACTCCGGCCGGTTTTGTTTGTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGACCGGATCATCTTTGACAATGCTAGACAGTGTAGCGGCAAACAGGACATTAGCAAATTCAGAACTTCCACCTCCGTTCTTCACCGTCGATCAACTCAAAGCTACGTTTTCTGCC
GTCGGCCTCAACACCACCGTAGACCTCGTTGCTCTCTCAG
GAGCCCACACATTTGGAAGGGCCCAATGTGGAAGCTTCATAAACAGGCTTTACAACTTCAACGGCACAGGAAGCCCAGAC
CCAACAGTTAACGCCACCTACCTCCAAACACTCCAGCAGCTCTGCCCCCAGAACGGAACCGCCACCGTTTTGGCCAACCTGGACCGCTCCACCGCCGACGGATTCGACTCCACGTACTTC
GCCAACCTCCAGACGCAGGAGGGGCCCCTCGACAGCGACCAGGCACTGTTCTCCACTCCAAATTCTGACACCATCGCGCTTGTGAACACGTTCTGCGTCAACCGTACTGCTTTCTTCGAG
AGCTTTGTTAACTCCATGATTAGGATGGGCAACATTCTTCCTCCGGTTGGGACCTCCGGCGAGATTAGGCTCAATTTCAGGGTTATTAACCCTGCTGCTTCTGGTACGGCTGTGATTACT
ACTCCGGCCGGTTTTGTTTGTTGA

Retrieve as FASTA