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Entry information : LuPrx160(Lus10029062|PACid:23151807)
Entry ID 12105
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx160(Lus10029062|PACid:23151807)
Name LuPrx160(Lus10029062|PACid:23151807)
Class Class III peroxidase     [Orthogroup: Prx008]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx160
start..stop		 S start..stop
LuPrx187 424 6.29e-151 1..294 1..323
GmPrx328 335 5.35e-116 9..293 8..320
MtPrx98 335 1.33e-115 11..293 12..322
GmPrx158 329 1.24e-113 9..294 8..321
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 331810..332025 214 N° 2 331439..331642 202 N° 3 331225..331331 105 N° 4 330797..331151 353
complement(join(330797..331151,331225..331331,331439..331642,331810..332025))


exon

Literature and cross-references LuPrx160(Lus10029062|PACid:23151807)
DNA ref. Phytozome 12:   scaffold376 (332025..330797)
Protein sequence: LuPrx160(Lus10029062|PACid:23151807)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   293 (268)
PWM (Da):   %s   31411.62 (28831.4) Transmb domain:   %s   o302-320i433-455o483-505i670-687o
PI (pH):   %s   10.14 (10.29) Peptide Signal:   %s   cut: 26 range:26-293
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASTSSVVMSLAMAMLLLVVGSSEAQLSTNFYSKSCPKLHEAILPVVQAAVRKEARMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARAPPQTATPLEALTSSTTSRP
PSRRLAPASYHAPTSSPSPPLGGPTWNVKLGRRDARTNPAADVQAKPSHQPVQRAGPRIYNENNIDGSLARTRRSNCPSRNGTGDNNLAPLDFQTPTSFDNRYFGNLVSQRGLLHSDQQL
FSGAGSTDSIVRSYSTNEGAFKSDFASAMVKMGDISPLTGSSGEIRRNCRRPN*

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTACTTCTAGTGTTGTCATGAGCTTGGCTATGGCGATGCTGCTCCTAGTTGTTGGGAGCAGTGAAGCTCAGCTCTCCACGAACTTCTACTCGAAATCCTGCCCTAAGCTTCAC
GAAGCTATCCTCCCTGTCGTTCAGGCTGCTGTTAGGAAAGAAGCTCGCATGGGCGCTTCTCTTCTTCGCCTCTTCTTCCATGACTGCTTTGTCAATGTAAGACTTCTGTTTTTTATTATA
ATGAATGTCATATTTGTTATGTTCCAATCCATTAGTTGTTGTAAAGCCTGGTGGGCTTGGGCTGAAAAGGCTGTAGTTGGGTTTTCAGTTTGAAAAAGCCCATTAAAACTTTGCATTACT
AAATATTGGTCTGCTGTGGTCAGGGGGATGCGACGGCTCCATTCTGCTGGACGACACCTCCTCCTTCACCGGAGAGAAGAACGCCAACCCGAACCGCAACTCCGCCAGGGCACCACCCCA
AACCGCAACTCCGCTAGAGGCTTTGACGTCATCGACAACATCAAGGCCGCCGTCGAGAAGGCTTGCCCCGGCGTCGTATCATGCGCCGACGTCCTCGCCATCTCCGCCCGTGACTCCACC
GTCCTCGTAAGCTTCTTCTATTCGAATATTCAACGATCTAACAATTTAAAAATTGACATTTTTAATAACTAAATTACTATTAATTTTCCACGTCAGCTCTGGGGGGTCCCACCTGGAACG
TGAAACTCGGGAGGCGAGACGCAAGGACAAATCCCGCCGCCGACGTCCAAGCAAAACCGTCTCACCAGCCGGTTCAACGCGCTGGGTCTCTCAACCCGGGACCTGGTGGCTCTCTCCGGA
TCCCACACGATCGGCCAAGCGAGATGCACTTCGTTCAGGCGCCGAGAATCTACAACGAGAACAACATCGACGGGTCGTTAGCCCGGACCCGGAGATCCAATTGCCCGAGCCGGAACGGAA
CCGGAGACAACAACCTGGCGCCGCTCGATTTCCAGACCCCGACCTCGTTCGACAACCGCTACTTTGGAAACCTCGTCAGCCAGCGCGGGCTGCTACACTCCGACCAGCAGCTGTTCTCCG
GCGCCGGGTCTACCGACTCGATCGTTCGTAGCTACAGCACTAATGAGGGGGCGTTCAAGTCTGATTTCGCGTCGGCGATGGTGAAGATGGGAGATATTAGCCCTTTGACTGGATCGAGCG
GCGAGATCAGGAGGAACTGCAGGAGGCCGAATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTACTTCTAGTGTTGTCATGAGCTTGGCTATGGCGATGCTGCTCCTAGTTGTTGGGAGCAGTGAAGCTCAGCTCTCCACGAACTTCTACTCGAAATCCTGCCCTAAGCTTCAC
GAAGCTATCCTCCCTGTCGTTCAGGCTGCTGTTAGGAAAGAAGCTCGCATGGGCGCTTCTCTTCTTCGCCTCTTCTTCCATGACTGCTTTGTCAATGGATGCGACGGCTCCATTCTGCTG
GACGACACCTCCTCCTTCACCGGAGAGAAGAACGCCAACCCGAACCGCAACTCCGCCAGGGCACCACCCCAAACCGCAACTCCGCTAGAGGCTTTGACGTCATCGACAACATCAAGGCCG
CCGTCGAGAAGGCTTGCCCCGGCGTCGTATCATGCGCCGACGTCCTCGCCATCTCCGCCCCTGGGGGGTCCCACCTGGAACGTGAAACTCGGGAGGCGAGACGCAAGGACAAATCCCGCC
GCCGACGTCCAAGCAAAACCGTCTCACCAGCCGGTTCAACGCGCTGGGCCGAGAATCTACAACGAGAACAACATCGACGGGTCGTTAGCCCGGACCCGGAGATCCAATTGCCCGAGCCGG
AACGGAACCGGAGACAACAACCTGGCGCCGCTCGATTTCCAGACCCCGACCTCGTTCGACAACCGCTACTTTGGAAACCTCGTCAGCCAGCGCGGGCTGCTACACTCCGACCAGCAGCTG
TTCTCCGGCGCCGGGTCTACCGACTCGATCGTTCGTAGCTACAGCACTAATGAGGGGGCGTTCAAGTCTGATTTCGCGTCGGCGATGGTGAAGATGGGAGATATTAGCCCTTTGACTGGA
TCGAGCGGCGAGATCAGGAGGAACTGCAGGAGGCCGAATTAA

Retrieve as FASTA