Entry information : LuPrx163(Lus10029201|PACid:23151818)
Entry ID 12108
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx163(Lus10029201|PACid:23151818)
Name LuPrx163(Lus10029201|PACid:23151818)
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx163
start..stop
S start..stop
LuPrx68 469 7e-170 1..228 102..329
PtPrx15 362 1e-127 1..226 103..328
EgrPrx61 350 5e-123 1..227 102..328
EguPrx61 350 7e-123 1..227 102..328
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1050507..1051193 687  
join(1050507..1051193)


exon

Literature and cross-references LuPrx163(Lus10029201|PACid:23151818)
DNA ref. Phytozome 12:   scaffold376 (1050507..1051193)
Protein sequence: LuPrx163(Lus10029201|PACid:23151818)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   228
PWM (Da):   %s   25701.77  
PI (pH):   %s   8.45
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVVRSKTELE LECPNVISCA DILSVATRNL VTMVGGPFYP VRLGRKDGMV SDPSRVEPNI LRPTMSISQI IGFFVSRGFT VQEMVTLMGA HTIGFSHCRE FANRLYNFSK ETPTDPSLNP 
KFADGLKKLC ENYTKDPTMS AFNDVMTPGK FDNMYYQNLE KGLGLLSSDE AMYMDQRTKP FVNLYAKNES AFFQAFAQAM EKVSNYKVKT GKDGEIRHRC DQINTVKI* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGTCC GTTCCAAGAC CGAGTTGGAG CTCGAATGCC CGAATGTGAT CTCGTGTGCG GACATTCTAT CCGTGGCAAC TCGCAACCTT GTCACAATGG TTGGTGGACC GTTCTATCCG  GTCCGCCTTG GCCGGAAGGA CGGCATGGTT TCAGACCCTT CCCGGGTGGA GCCCAACATA CTCCGCCCCA CAATGTCAAT CTCTCAGATC ATCGGATTCT TTGTTTCGAG AGGGTTCACG  GTTCAAGAAA TGGTAACATT GATGGGAGCG CATACGATCG GGTTCTCACA TTGTAGAGAG TTTGCTAATC GGCTTTACAA TTTCAGCAAG GAAACCCCTA CAGATCCTTC ACTCAACCCG  AAATTTGCAG ACGGGCTGAA GAAACTGTGC GAAAACTATA CGAAGGACCC AACAATGAGC GCATTCAACG ACGTGATGAC CCCTGGGAAA TTTGACAACA TGTATTACCA AAATCTGGAG  AAAGGTTTGG GATTGCTTTC GTCGGATGAA GCTATGTACA TGGATCAGAG AACGAAGCCT TTCGTCAACC TTTATGCAAA GAATGAGTCG GCCTTCTTCC AAGCGTTTGC TCAAGCGATG 
GAGAAGGTCA GTAACTACAA GGTCAAGACA GGGAAAGATG GAGAGATCAG ACATAGGTGC GACCAGATCA ACACTGTAAA AATTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGTCC GTTCCAAGAC CGAGTTGGAG CTCGAATGCC CGAATGTGAT CTCGTGTGCG GACATTCTAT CCGTGGCAAC TCGCAACCTT GTCACAATGG TTGGTGGACC GTTCTATCCG  GTCCGCCTTG GCCGGAAGGA CGGCATGGTT TCAGACCCTT CCCGGGTGGA GCCCAACATA CTCCGCCCCA CAATGTCAAT CTCTCAGATC ATCGGATTCT TTGTTTCGAG AGGGTTCACG  GTTCAAGAAA TGGTAACATT GATGGGAGCG CATACGATCG GGTTCTCACA TTGTAGAGAG TTTGCTAATC GGCTTTACAA TTTCAGCAAG GAAACCCCTA CAGATCCTTC ACTCAACCCG  AAATTTGCAG ACGGGCTGAA GAAACTGTGC GAAAACTATA CGAAGGACCC AACAATGAGC GCATTCAACG ACGTGATGAC CCCTGGGAAA TTTGACAACA TGTATTACCA AAATCTGGAG  AAAGGTTTGG GATTGCTTTC GTCGGATGAA GCTATGTACA TGGATCAGAG AACGAAGCCT TTCGTCAACC TTTATGCAAA GAATGAGTCG GCCTTCTTCC AAGCGTTTGC TCAAGCGATG 
GAGAAGGTCA GTAACTACAA GGTCAAGACA GGGAAAGATG GAGAGATCAG ACATAGGTGC GACCAGATCA ACACTGTAAA AATTTAA 

Retrieve as FASTA