Entry information : LuPrx183(Lus10033193|PACid:23178068)
Entry ID 12122
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx183(Lus10033193|PACid:23178068)
Name LuPrx183(Lus10033193|PACid:23178068)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx183
start..stop
S start..stop
LuPrx67 214 5e-71 2..118 224..344
CpapPrx09 165 1e-51 1..118 217..344
PpePrx60 163 3e-51 1..118 208..342
NtPrx05-1A 160 4e-50 1..118 203..329
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1089406..1089762 357  
join(1089406..1089762)


exon

Literature and cross-references LuPrx183(Lus10033193|PACid:23178068)
DNA ref. Phytozome 12:   scaffold50 (1089406..1089762)
Protein sequence: LuPrx183(Lus10033193|PACid:23178068)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   118
PWM (Da):   %s   13394.92  
PI (pH):   %s   10.66
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MTFKQRLYSQ KGPDLSSKRT YCIGLKSGCP RSGGDNNISP LDFGSPARFD NTYFNLILRG KVLLTSDQVL FTFQLVKRYA EDQQLFFAQF TKSMVRMGSV GVLTGFKGEV RKNCRRLN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGTTCA AGCAGAGACT GTACAGCCAA AAGGGTCCGG ACCTGAGTTC GAAGAGGACT TACTGCATTG GGTTGAAGTC GGGCTGTCCT AGATCGGGCG GTGACAACAA CATTAGCCCT  CTCGATTTCG GTTCCCCTGC CAGATTCGAC AACACCTACT TCAACCTCAT CCTGCGGGGC AAAGTCCTCC TCACTTCGGA CCAAGTTCTG TTCACGTTTC AGTTGGTGAA GAGATATGCT 
GAGGACCAGC AACTTTTCTT TGCTCAATTC ACCAAGTCCA TGGTCAGAAT GGGGAGCGTC GGTGTTCTCA CTGGCTTTAA GGGTGAAGTT CGCAAGAACT GTCGTCGTCT CAACTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGTTCA AGCAGAGACT GTACAGCCAA AAGGGTCCGG ACCTGAGTTC GAAGAGGACT TACTGCATTG GGTTGAAGTC GGGCTGTCCT AGATCGGGCG GTGACAACAA CATTAGCCCT  CTCGATTTCG GTTCCCCTGC CAGATTCGAC AACACCTACT TCAACCTCAT CCTGCGGGGC AAAGTCCTCC TCACTTCGGA CCAAGTTCTG TTCACGTTTC AGTTGGTGAA GAGATATGCT 
GAGGACCAGC AACTTTTCTT TGCTCAATTC ACCAAGTCCA TGGTCAGAAT GGGGAGCGTC GGTGTTCTCA CTGGCTTTAA GGGTGAAGTT CGCAAGAACT GTCGTCGTCT CAACTAA 

Retrieve as FASTA