Entry information : LuPrx202(Lus10039471|PACid:23175647)
Entry ID 12134
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx202(Lus10039471|PACid:23175647)
Name LuPrx202(Lus10039471|PACid:23175647)
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx202
start..stop
S start..stop
LuPrx201 380 1.49e-135 1..188 137..324
LuPrx80 333 1.34e-118 1..188 1..192
LuPrx177 333 1.59e-116 1..188 141..332
RcPrx41 300 8.36e-104 1..187 136..320
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12134' 'complement(join(2021994..2022557))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2021994..2022557 562  
complement(join(2021994..2022557))


exon

Literature and cross-references LuPrx202(Lus10039471|PACid:23175647)
DNA ref. Phytozome 12:   scaffold33 (2022557..2021994)
Protein sequence: LuPrx202(Lus10039471|PACid:23175647)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   187 (296)
PWM (Da):   %s   20880.4 (30229.8)  
PI (pH):   %s   9.97 (5.65) Peptide Signal:   %s   cut: 25 range:25-320
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVGGPYYNVL LGRLDYRISK SSFIPGNLPL PSMSTSQMIG MFAARGFSVQ EMVALSGAHT IGFSHCKEFS GLLYNGSSSG YNPRFAQALR KACTNSRKDP SVSVFNDIMT PNKFDNVYYQ 
NLPKGLGLLA SDHALVKDDR TRPFVEMYAR DQNKFFHDFA NAMQKLSVYG IKTGRRGEIR HRCDAIN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTCGGCG GCCCTTACTA CAACGTCCTA CTCGGCCGCC TCGACTACCG CATCTCCAAG TCTTCCTTCA TCCCCGGAAA CCTCCCTTTG CCGTCGATGT CCACCTCGCA AATGATCGGA  ATGTTCGCTG CCAGGGGATT CTCTGTCCAG GAGATGGTGG CGCTTAGCGG GGCTCACACC ATTGGGTTTT CTCACTGTAA AGAGTTCAGC GGGCTGCTCT ACAACGGTAG CTCAAGCGGA  TACAATCCGA GATTTGCGCA GGCGCTTCGG AAGGCGTGCA CCAATTCAAG GAAGGACCCG TCGGTTTCGG TGTTCAACGA CATAATGACA CCCAACAAAT TCGACAATGT GTACTACCAG  AACTTGCCCA AGGGGCTGGG TTTGCTGGCG TCGGACCACG CCCTGGTCAA AGACGACAGG ACACGGCCCT TTGTGGAGAT GTACGCCAGG GATCAGAACA AGTTCTTCCA TGATTTCGCC 
AATGCGATGC AGAAGCTGAG CGTTTATGGG ATCAAGACTG GGAGGAGAGG CGAAATTAGG CACAGGTGTG ATGCTATCAA CTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTCGGCG GCCCTTACTA CAACGTCCTA CTCGGCCGCC TCGACTACCG CATCTCCAAG TCTTCCTTCA TCCCCGGAAA CCTCCCTTTG CCGTCGATGT CCACCTCGCA AATGATCGGA  ATGTTCGCTG CCAGGGGATT CTCTGTCCAG GAGATGGTGG CGCTTAGCGG GGCTCACACC ATTGGGTTTT CTCACTGTAA AGAGTTCAGC GGGCTGCTCT ACAACGGTAG CTCAAGCGGA  TACAATCCGA GATTTGCGCA GGCGCTTCGG AAGGCGTGCA CCAATTCAAG GAAGGACCCG TCGGTTTCGG TGTTCAACGA CATAATGACA CCCAACAAAT TCGACAATGT GTACTACCAG  AACTTGCCCA AGGGGCTGGG TTTGCTGGCG TCGGACCACG CCCTGGTCAA AGACGACAGG ACACGGCCCT TTGTGGAGAT GTACGCCAGG GATCAGAACA AGTTCTTCCA TGATTTCGCC 
AATGCGATGC AGAAGCTGAG CGTTTATGGG ATCAAGACTG GGAGGAGAGG CGAAATTAGG CACAGGTGTG ATGCTATCAA CTGA 

Retrieve as FASTA