Entry information : LuPrx21(Lus10004163|PACid:23153333)
Entry ID 12141
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx21(Lus10004163|PACid:23153333)
Name LuPrx21(Lus10004163|PACid:23153333)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx21
start..stop
S start..stop
RcPrx16 482 5.5e-173 14..326 19..333
MePrx53 480 2.54e-172 9..326 13..332
EcamPrx55 480 2.7e-172 4..326 6..330
IaquPrx52 478 1.29e-171 15..326 12..326
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12141' 'complement(join(82841..83241,83674..84037,84166..84381))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 84166..84381 214 N° 2 83674..84037 362 N° 3 82841..83241 399  
complement(join(82841..83241,83674..84037,84166..84381))


exon

Literature and cross-references LuPrx21(Lus10004163|PACid:23153333)
DNA ref. Phytozome 12:   scaffold2404 (84381..82841)
Protein sequence: LuPrx21(Lus10004163|PACid:23153333)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (301)
PWM (Da):   %s   34289.65 (31450.2)  
PI (pH):   %s   4.89 (4.70) Peptide Signal:   %s   cut: 26 range:26-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRFAPMVTMFSVTIIGLLFLGQSNAQLTSTFYATTCPNVSNVVSNVIQQALQSDARIAASLIRLHFHDCFVQGCDGSILLDDNSTANIQSEKNAGPNANSARGFPVVDSIKSAVENVCPG
VVSCADILALAAEASVVQSGGPSWSVLLGRRDSRTANQGGANASIPAPFDNLANLTSKFSNVGLNTNDLVALSGAHTFGRAQCRTFVNRLYNFTGSGPDPTLSSSYATTLQQTCPQNGNG
AALANLDPTTSDTFDNNYYSNLQNNQGLLQSDQALTGTSTMALVNAFSNNQTAFFQSFVQSMVNMGNISPLTGSSGEIRGDCKMIN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGTTTGCTCCAATGGTGACAATGTTTTCCGTGACGATAATTGGACTACTCTTCCTCGGCCAATCGAATGCTCAATTAACCTCGACGTTCTACGCCACCACCTGTCCCAACGTCTCT
AACGTCGTCAGCAACGTCATCCAGCAAGCTCTCCAGTCCGACGCCAGGATCGCCGCCAGCCTCATCCGCCTCCATTTCCACGATTGCTTCGTCCAG
GTACTATTCGTAACTAAAAGCATT
ACTAAAAACTGTCACGTTAATTTTCTGCGACGGTAAATTTTAGTGACCATAATTTTATCTGAATTAACGGTTTAGTGATGTTTTTTTTTTTGTTGAGTGAACAGGGGGGTGTGACGGGTC
GATCTTGCTGGACGACAACTCGACGGCGAACATCCAGAGCGAGAAGAACGCAGGACCGAACGCCAACTCGGCGAGAGGGTTCCCGGTGGTGGACAGCATCAAGTCGGCCGTGGAAAACGT
GTGCCCTGGTGTTGTGTCCTGCGCGGACATCCTTGCTCTGGCCGCCGAGGCTTCCGTTGTGCAGTCCGGTGGGCCGTCGTGGAGCGTGCTGTTGGGGAGAAGGGACAGTCGAACTGCAAA
TCAAGGAGGAGCCAACGCTTCGATTCCGGCTCCTTTCGATAACCTTGCGAATCTCACTTCGAAGTTCAGTAACGTTGGCCTTAACACCAACGATCTTGTTGCATTATCAG
GTAATTAACT
ATAAAATAGAATCATGATTCAATTGTTATATGAGAATAATTAATGACCAATTAAGTAACGAATTAAAGTTTAGTTCTTTCGTGCTTTTTCATACTCATTCGACCTTGTATTTATGTATCG
TTTGCTTATAGTTATTCAGTACAACAATCAGAGACGGATTCAGAATCAAAAGTTAAAACCCGGCCAATTATTGGAAAATATTTGATTGAATTACTAAAACACATCGAAATGTATACATTT
GGAAGTACAGATACTATAAAGATAAGGCTGCCAAAGTTGGTGCCAGAAACCGAACTTTGCCAGTAGATGTCAATATTTTAACTAAACTAGTAAATACTAGAGTACAAACTAATTAATTGA
GTAGCAGGTAACTAATTAACGACCCCAACTAAACTAATCTGTTTTTTTTTTAACTTTGGCAGGGGGGCCCACACGTTCGGCCGGGCACAGTGCCGTACATTCGTGAACCGGCTCTACAAC
TTCACCGGGTCGGGACCTGACCCGACTCTGAGCTCGTCGTATGCGACCACCCTGCAGCAGACGTGCCCACAAAACGGCAACGGAGCGGCATTGGCGAACCTCGATCCGACAACTTCCGAC
ACTTTCGACAACAACTACTACTCGAACCTCCAGAACAACCAGGGATTGTTGCAGTCTGACCAGGCGCTGACCGGGACTTCAACGATGGCCCTGGTCAACGCCTTCAGCAACAACCAAACA
GCTTTCTTCCAGAGTTTTGTACAGTCGATGGTCAACATGGGTAATATAAGCCCGTTGACCGGGAGCAGTGGCGAGATTAGAGGGGATTGTAAGATGATTAATTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGGTTTGCTCCAATGGTGACAATGTTTTCCGTGACGATAATTGGACTACTCTTCCTCGGCCAATCGAATGCTCAATTAACCTCGACGTTCTACGCCACCACCTGTCCCAACGTCTCT
AACGTCGTCAGCAACGTCATCCAGCAAGCTCTCCAGTCCGACGCCAGGATCGCCGCCAGCCTCATCCGCCTCCATTTCCACGATTGCTTCGTCCAG
GGGTGTGACGGGTCGATCTTGCTG
GACGACAACTCGACGGCGAACATCCAGAGCGAGAAGAACGCAGGACCGAACGCCAACTCGGCGAGAGGGTTCCCGGTGGTGGACAGCATCAAGTCGGCCGTGGAAAACGTGTGCCCTGGT
GTTGTGTCCTGCGCGGACATCCTTGCTCTGGCCGCCGAGGCTTCCGTTGTGCAGTCCGGTGGGCCGTCGTGGAGCGTGCTGTTGGGGAGAAGGGACAGTCGAACTGCAAATCAAGGAGGA
GCCAACGCTTCGATTCCGGCTCCTTTCGATAACCTTGCGAATCTCACTTCGAAGTTCAGTAACGTTGGCCTTAACACCAACGATCTTGTTGCATTATCAG
GGGCCCACACGTTCGGCCGG
GCACAGTGCCGTACATTCGTGAACCGGCTCTACAACTTCACCGGGTCGGGACCTGACCCGACTCTGAGCTCGTCGTATGCGACCACCCTGCAGCAGACGTGCCCACAAAACGGCAACGGA
GCGGCATTGGCGAACCTCGATCCGACAACTTCCGACACTTTCGACAACAACTACTACTCGAACCTCCAGAACAACCAGGGATTGTTGCAGTCTGACCAGGCGCTGACCGGGACTTCAACG
ATGGCCCTGGTCAACGCCTTCAGCAACAACCAAACAGCTTTCTTCCAGAGTTTTGTACAGTCGATGGTCAACATGGGTAATATAAGCCCGTTGACCGGGAGCAGTGGCGAGATTAGAGGG
GATTGTAAGATGATTAATTAG

Retrieve as FASTA