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Entry information : LuPrx210(Lus10042144|PACid:23153666)
Entry ID 12142
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx210(Lus10042144|PACid:23153666)
Name LuPrx210(Lus10042144|PACid:23153666)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx210
start..stop		 S start..stop
LuPrx24 659 0 1..336 1..336
RcPrx66 451 5.58e-161 26..333 18..325
MePrx95 441 1.45e-156 25..335 23..333
PtPrx15 428 7.63e-152 9..333 6..328
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12142' 'join(895105..896112)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 895105..896112 1006  
join(895105..896112)


exon

Literature and cross-references LuPrx210(Lus10042144|PACid:23153666)
DNA ref. Phytozome 12:   scaffold123 (895105..896112)
Protein sequence: LuPrx210(Lus10042144|PACid:23153666)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335 (307)
PWM (Da):   %s   37265.42 (33991.7) Transmb domain:   %s   i7-26o
PI (pH):   %s   4.94 (4.54) Peptide Signal:   %s   cut: 29 range:29-335
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATHHQYRHS IILLSITIFL SIPILSNSQL SLDYYKTTCP EFDRIVSETV TTKQISNPTT AAASLRIFFH DCMVDGCDAS VLVAPNHFNK VERDNELDQD LPGDGFDVVT RVKTALELAC  PKTVSCADIL AEVARDLVVM VGGPNYPVLL GRKDSLVSLS DNVVPNLPLP NMTNDRIISM FESKGFTIQD MVALVGAHTI GFSHCKQFAK RIYNFSKEVE TDPEMNPTYA AGLKKFCANY 
TNDPTMSAFN DLYTPGKFDN MYYQNLLKGM GLLASDQLLM DDPRTKKFVE LYAANQTAFF DDFSKGMEKL SVLDVKTGNE GDVRSMCDEF NTVKS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGACTC ATCACCAATA TCGTCATTCC ATCATCCTCC TATCAATCAC CATCTTCCTC TCCATACCTA TCCTCTCCAA TTCCCAGCTC TCCCTCGACT ACTACAAGAC CACTTGCCCC  GAATTCGACA GGATCGTCAG CGAAACCGTC ACCACCAAAC AGATCTCCAA CCCCACCACA GCCGCCGCCT CTCTCCGCAT CTTCTTCCAT GACTGCATGG TCGACGGCTG CGATGCTTCC  GTCCTCGTCG CCCCCAACCA CTTCAACAAA GTCGAGCGCG ACAACGAACT GGATCAGGAC TTGCCTGGTG ACGGCTTTGA TGTCGTCACC CGCGTCAAGA CCGCCTTGGA GCTGGCATGC  CCCAAGACGG TCTCGTGCGC TGACATCCTC GCGGAGGTAG CACGTGACCT CGTTGTAATG GTTGGCGGCC CCAACTATCC TGTCTTGTTG GGCCGGAAAG ACAGCCTGGT CTCTCTATCC  GACAACGTAG TACCCAACCT CCCATTGCCT AACATGACCA ATGATCGGAT CATCAGCATG TTCGAGTCTA AAGGGTTCAC GATCCAGGAC ATGGTCGCCT TAGTCGGAGC CCACACTATA  GGGTTCTCAC ATTGTAAGCA GTTTGCCAAA AGGATTTACA ACTTTAGCAA AGAGGTGGAG ACCGATCCGG AGATGAACCC GACATATGCT GCGGGTTTGA AGAAGTTTTG TGCTAATTAT  ACAAATGATC CCACAATGTC GGCTTTTAAT GATCTGTACA CTCCGGGAAA GTTCGACAAC ATGTATTACC AAAACCTGCT TAAAGGAATG GGGCTTTTGG CATCGGATCA GTTGCTAATG  GATGATCCAA GGACGAAGAA GTTTGTAGAG CTCTATGCAG CTAACCAAAC TGCTTTTTTT GATGATTTCT CAAAAGGTAT GGAGAAGTTA AGCGTATTGG ATGTTAAGAC TGGGAATGAA 
GGTGATGTTA GGAGTATGTG TGACGAATTT AACACTGTCA AGTCTTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGACTC ATCACCAATA TCGTCATTCC ATCATCCTCC TATCAATCAC CATCTTCCTC TCCATACCTA TCCTCTCCAA TTCCCAGCTC TCCCTCGACT ACTACAAGAC CACTTGCCCC  GAATTCGACA GGATCGTCAG CGAAACCGTC ACCACCAAAC AGATCTCCAA CCCCACCACA GCCGCCGCCT CTCTCCGCAT CTTCTTCCAT GACTGCATGG TCGACGGCTG CGATGCTTCC  GTCCTCGTCG CCCCCAACCA CTTCAACAAA GTCGAGCGCG ACAACGAACT GGATCAGGAC TTGCCTGGTG ACGGCTTTGA TGTCGTCACC CGCGTCAAGA CCGCCTTGGA GCTGGCATGC  CCCAAGACGG TCTCGTGCGC TGACATCCTC GCGGAGGTAG CACGTGACCT CGTTGTAATG GTTGGCGGCC CCAACTATCC TGTCTTGTTG GGCCGGAAAG ACAGCCTGGT CTCTCTATCC  GACAACGTAG TACCCAACCT CCCATTGCCT AACATGACCA ATGATCGGAT CATCAGCATG TTCGAGTCTA AAGGGTTCAC GATCCAGGAC ATGGTCGCCT TAGTCGGAGC CCACACTATA  GGGTTCTCAC ATTGTAAGCA GTTTGCCAAA AGGATTTACA ACTTTAGCAA AGAGGTGGAG ACCGATCCGG AGATGAACCC GACATATGCT GCGGGTTTGA AGAAGTTTTG TGCTAATTAT  ACAAATGATC CCACAATGTC GGCTTTTAAT GATCTGTACA CTCCGGGAAA GTTCGACAAC ATGTATTACC AAAACCTGCT TAAAGGAATG GGGCTTTTGG CATCGGATCA GTTGCTAATG  GATGATCCAA GGACGAAGAA GTTTGTAGAG CTCTATGCAG CTAACCAAAC TGCTTTTTTT GATGATTTCT CAAAAGGTAT GGAGAAGTTA AGCGTATTGG ATGTTAAGAC TGGGAATGAA 
GGTGATGTTA GGAGTATGTG TGACGAATTT AACACTGTCA AGTCTTAA 

Retrieve as FASTA