Entry information : LuPrx22(Lus10004218|PACid:23175390)
Entry ID 12144
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx22(Lus10004218|PACid:23175390)
Name LuPrx22(Lus10004218|PACid:23175390)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx22
start..stop
S start..stop
LuPrx63 129 4e-39 1..67 259..325
LuPrx168 98 7e-27 1..67 255..321
LuPrx64 98 8e-27 1..67 255..321
LuPrx49 94 1e-25 1..67 241..307
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 143476..143679 204  
join(143476..143679)


exon

Literature and cross-references LuPrx22(Lus10004218|PACid:23175390)
DNA ref. Phytozome 12:   scaffold555 (143476..143679)
Protein sequence: LuPrx22(Lus10004218|PACid:23175390)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   67
PWM (Da):   %s   7429.69  
PI (pH):   %s   10.87
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MQSRGLLHSD QELLGKGNSA SYMLVRMYGS NPRRFAADFA ASMVKMGNMK PLTGNNGEIR KNCRIVN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGTCGA GAGGGCTTCT GCATTCCGAC CAGGAGCTGC TCGGGAAAGG TAATAGTGCG AGTTATATGC TGGTGAGGAT GTACGGAAGT AATCCGAGGA GGTTCGCGGC GGATTTTGCA 
GCGTCGATGG TTAAGATGGG GAATATGAAG CCACTCACTG GGAATAATGG GGAGATTAGA AAGAATTGCC GCATCGTTAA TTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGTCGA GAGGGCTTCT GCATTCCGAC CAGGAGCTGC TCGGGAAAGG TAATAGTGCG AGTTATATGC TGGTGAGGAT GTACGGAAGT AATCCGAGGA GGTTCGCGGC GGATTTTGCA 
GCGTCGATGG TTAAGATGGG GAATATGAAG CCACTCACTG GGAATAATGG GGAGATTAGA AAGAATTGCC GCATCGTTAA TTAA 

Retrieve as FASTA