Entry information : LuPrx24(Lus10004234|PACid:23177801)
Entry ID 12145
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx24(Lus10004234|PACid:23177801)
Name LuPrx24(Lus10004234|PACid:23177801)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx24
start..stop
S start..stop
LuPrx210 659 0 1..335 1..335
RcPrx66 447 3e-159 26..332 18..324
MePrx95 439 3e-156 25..334 23..332
PtPrx15 430 2e-152 12..333 8..328
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 30493..31500 1008  
join(30493..31500)


exon

Literature and cross-references LuPrx24(Lus10004234|PACid:23177801)
DNA ref. Phytozome 12:   scaffold122 (30493..31500)
Protein sequence: LuPrx24(Lus10004234|PACid:23177801)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (307)
PWM (Da):   %s   37100.39 (33912.7)  
PI (pH):   %s   4.95 (4.55) Peptide Signal:   %s   cut: 29 range:29-335
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATHHQHHHS SILLSITIFL SIPLLSDSQL SLDYYKTTCP EFDKIVSETI TTKQISNPTT AAASLRIFFH DCMVDGCDAS VLVAPNNFKK VERDNELDQD LPGDGFDVVT RVKTALELAC  PKTVSCADIL AEVARDLVVM VGGPNYPVLL GRKDSLASLS ENVVPNLPLP NMTNDRIISL FESKGFTIQD MVALVGAHTI GFSHCKQFAK RIYNFSNEVE TDPEMNPTYA AGLKNLCANY 
TKDPTMSAFN DLYTPGKFDN MYYQNLLKGM GLLASDQLLM DDPRTKKFVE LYAANQTAFF DDFSKGMEKL SVLDVKTGNE GDVRNRCDEF NTAKA* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACTC ATCACCAACA TCACCATTCC TCCATCCTCC TATCAATCAC CATCTTCCTC TCCATACCTC TCCTCTCCGA TTCCCAGCTC TCCCTCGACT ACTACAAGAC CACTTGCCCC  GAATTCGACA AGATCGTCAG CGAGACCATC ACCACCAAAC AGATCTCCAA CCCCACCACA GCCGCGGCTT CTCTCCGCAT CTTCTTCCAC GACTGCATGG TCGACGGTTG CGATGCGTCT  GTCCTCGTCG CCCCTAACAA CTTCAAGAAG GTCGAGCGCG ACAACGAGCT GGACCAGGAC TTGCCCGGTG ACGGATTTGA TGTCGTCACC CGCGTCAAGA CCGCCTTGGA GCTGGCCTGC  CCCAAGACGG TCTCGTGCGC TGACATCCTC GCGGAGGTCG CGCGTGACCT CGTCGTAATG GTTGGAGGGC CCAACTATCC TGTCTTGTTG GGCCGGAAGG ACAGCCTGGC CTCTCTGTCT  GAAAACGTGG TACCCAACCT CCCCTTGCCT AACATGACCA ATGACCGGAT CATCAGCCTG TTCGAGTCCA AAGGGTTCAC GATCCAGGAC ATGGTCGCCT TGGTTGGAGC CCACACTATA  GGGTTCTCTC ATTGTAAGCA GTTTGCCAAA AGGATTTACA ACTTTAGTAA CGAGGTGGAG ACCGATCCTG AGATGAACCC GACATATGCC GCGGGTTTGA AGAATTTATG TGCTAATTAC  ACAAAGGATC CCACAATGTC GGCTTTTAAT GATCTCTACA CTCCGGGAAA GTTTGACAAC ATGTATTACC AGAACTTGCT TAAAGGGATG GGGCTTCTGG CGTCGGATCA GTTGCTAATG  GATGATCCAA GGACGAAGAA GTTTGTGGAG CTCTATGCGG CTAACCAAAC CGCCTTTTTT GATGATTTTT CAAAAGGTAT GGAGAAGTTA AGCGTATTGG ATGTTAAGAC TGGGAATGAA 
GGTGATGTTA GGAATAGGTG TGACGAATTT AACACTGCCA AGGCTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACTC ATCACCAACA TCACCATTCC TCCATCCTCC TATCAATCAC CATCTTCCTC TCCATACCTC TCCTCTCCGA TTCCCAGCTC TCCCTCGACT ACTACAAGAC CACTTGCCCC  GAATTCGACA AGATCGTCAG CGAGACCATC ACCACCAAAC AGATCTCCAA CCCCACCACA GCCGCGGCTT CTCTCCGCAT CTTCTTCCAC GACTGCATGG TCGACGGTTG CGATGCGTCT  GTCCTCGTCG CCCCTAACAA CTTCAAGAAG GTCGAGCGCG ACAACGAGCT GGACCAGGAC TTGCCCGGTG ACGGATTTGA TGTCGTCACC CGCGTCAAGA CCGCCTTGGA GCTGGCCTGC  CCCAAGACGG TCTCGTGCGC TGACATCCTC GCGGAGGTCG CGCGTGACCT CGTCGTAATG GTTGGAGGGC CCAACTATCC TGTCTTGTTG GGCCGGAAGG ACAGCCTGGC CTCTCTGTCT  GAAAACGTGG TACCCAACCT CCCCTTGCCT AACATGACCA ATGACCGGAT CATCAGCCTG TTCGAGTCCA AAGGGTTCAC GATCCAGGAC ATGGTCGCCT TGGTTGGAGC CCACACTATA  GGGTTCTCTC ATTGTAAGCA GTTTGCCAAA AGGATTTACA ACTTTAGTAA CGAGGTGGAG ACCGATCCTG AGATGAACCC GACATATGCC GCGGGTTTGA AGAATTTATG TGCTAATTAC  ACAAAGGATC CCACAATGTC GGCTTTTAAT GATCTCTACA CTCCGGGAAA GTTTGACAAC ATGTATTACC AGAACTTGCT TAAAGGGATG GGGCTTCTGG CGTCGGATCA GTTGCTAATG  GATGATCCAA GGACGAAGAA GTTTGTGGAG CTCTATGCGG CTAACCAAAC CGCCTTTTTT GATGATTTTT CAAAAGGTAT GGAGAAGTTA AGCGTATTGG ATGTTAAGAC TGGGAATGAA 
GGTGATGTTA GGAATAGGTG TGACGAATTT AACACTGCCA AGGCTTAA 

Retrieve as FASTA