Entry information : LuPrx26(Lus10004859|PACid:23157153)
Entry ID 12147
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx26(Lus10004859|PACid:23157153)
Name LuPrx26(Lus10004859|PACid:23157153)
Class Class III peroxidase    [Orthogroup: Prx033]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx26
start..stop
S start..stop
MePrx79 418 8.6e-148 12..315 24..323
PpePrx68 409 2.59e-144 1..317 12..327
CclPrx109 404 1.04e-142 1..316 13..324
HaPrx42 394 1.77e-138 17..316 28..325
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12147' 'complement(join(44432..44844,44935..45094,45179..45361,45954..46151))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 45954..46151 196 N° 2 45179..45361 181 N° 3 44935..45094 158 N° 4 44432..44844 411
complement(join(44432..44844,44935..45094,45179..45361,45954..46151))


exon

Literature and cross-references LuPrx26(Lus10004859|PACid:23157153)
DNA ref. Phytozome 12:   scaffold1821 (46151..44432)
Protein sequence: LuPrx26(Lus10004859|PACid:23157153)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317 (302)
PWM (Da):   %s   34063.33 (32469.4)  
PI (pH):   %s   8.56 (8.56) Peptide Signal:   %s   cut: 16 range:16-317
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGLLLLGLAADKAQAQLQFGFYKGKCRATNVDVESTVRSIVSEKYQSDKSIVAALLRMQFHDCFVQGCDASILLDGTTSEKTAPPNLSVRGYEIIDAVKTALEGSCGPQVVSCADIIVMA
TRDAVSLAKGGFYNVQTGRRDGLVSQAKNVALPAPNVPIPQAIGMFARKNLSPIDMVYLLGGHTVGVSHCAFFQDRLYNFKNTGRPDPSMNTTLLNSLRQTCPPNSNSANTTNLDQNPTS
SLVVDNSYYQQLLRRNGILQVDQDLASNPLTGFIVSAIASRADFSARFGQAMVNLGAVDVLTGQQGQIRKSCRAVNK*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTCTCTTATTGTTGGGCCTAGCAGCGGACAAGGCCCAAGCCCAGCTCCAGTTCGGGTTCTACAAGGGGAAATGCAGAGCCACCAACGTGGACGTGGAGTCCACCGTCCGGAGCATC
GTGTCGGAGAAGTACCAGTCCGACAAGTCCATCGTCGCTGCTCTGCTCCGCATGCAGTTCCACGACTGCTTTGTCCAA
GTAAACAATTTTTATTCATATTTATAAATTAAGAGTGGGAAA
CCGGGCACACCGTTTATTTGGTTGGACCGAAATTGATCATTGACTGGTCGAAACCGGTTTCAATCATTCGAAAACCGGCTGCAGTAGTAGGTTTGGATCCATGTGCAGTTTTAACTCAGT
TCCTTCATGATTTCCAAATAAATTGTGAATCAATACTTAATTGTCTAAATCCACAAATTAAATATCCAAACCAACTATTTTGTATTAACCGAACCGAGAGTCTCGGTCAATTCTGAAAAA
TGTCCAAACCCATATATTATCTCAATCTTTTTTCAAAATCGATAAAAATTCTGGCCAAAACTACTCAAATTTGTCATAATTCGGTGAAATTCGGTGGGCCGTAACCAAATTCAATCCGGT
AACGGTCACGATCACGAGTTTTGGTTGATTTCGGTCATGGCCACATATCGAATTTGGTTCAGTTTTAACAATGATTGACCGAATTACCACCGTTACCTATATTCATTTAGACCCATTTTA
GTTATTTGTATCGAAACTTTGAAAGTAATTTTTTTTAATAACACATTTATTTTGTTTGCGTTATTTATAGGGGGTTGTGATGCATCGATACTCCTAGACGGGACAACCAGCGAGAAGACT
GCGCCGCCGAATCTAAGTGTGAGGGGCTACGAGATCATAGACGCGGTGAAGACTGCACTAGAAGGGTCATGTGGACCGCAAGTCGTTTCTTGCGCTGACATCATCGTCATGGCTACTAGG
GATGCTGTATCACTG
GTGATTATTCTTGGGCATCCTCCTAAATCATGTTTAGCATATTGATCGACTAAGTGAGATTAACGATTGTGTTCGGCTTTATAGGCGCGAAAGGCGGGTTTTACA
ACGTGCAAACCGGGAGGAGGGACGGGTTGGTGTCACAAGCTAAAAATGTAGCTCTTCCGGCTCCGAATGTCCCGATCCCTCAAGCCATTGGCATGTTTGCTAGGAAGAACCTCTCCCCAA
TTGACATGGTTTATCTTCTCG
GTGCGTACACGATCTTGAAAACCGATCAATTCGGAACGTTCAATTTTTCGAAATGGTTAACTCATACATGTTATGTAATCTTTTTGGTAGGAGAGGACA
CACGGTTGGTGTATCACACTGTGCATTTTTCCAAGACCGTCTGTACAACTTTAAAAACACGGGACGACCCGACCCGAGCATGAACACAACCCTACTCAACTCCCTCAGGCAGACTTGCCC
ACCCAACTCGAACTCGGCCAACACCACGAACTTGGACCAGAACCCGACCAGCTCTCTCGTGGTCGACAATTCCTACTACCAGCAACTCTTGAGACGTAATGGTATACTCCAGGTCGACCA
AGACCTGGCTTCCAACCCTCTTACCGGGTTCATTGTGTCGGCAATCGCGAGTCGGGCTGATTTCTCGGCCCGGTTTGGGCAGGCCATGGTCAACTTGGGTGCTGTGGATGTGCTCACTGG
TCAGCAAGGGCAGATCAGGAAGTCTTGCCGGGCTGTTAACAAATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTCTCTTATTGTTGGGCCTAGCAGCGGACAAGGCCCAAGCCCAGCTCCAGTTCGGGTTCTACAAGGGGAAATGCAGAGCCACCAACGTGGACGTGGAGTCCACCGTCCGGAGCATC
GTGTCGGAGAAGTACCAGTCCGACAAGTCCATCGTCGCTGCTCTGCTCCGCATGCAGTTCCACGACTGCTTTGTCCAA
GGTTGTGATGCATCGATACTCCTAGACGGGACAACCAGCGAG
AAGACTGCGCCGCCGAATCTAAGTGTGAGGGGCTACGAGATCATAGACGCGGTGAAGACTGCACTAGAAGGGTCATGTGGACCGCAAGTCGTTTCTTGCGCTGACATCATCGTCATGGCT
ACTAGGGATGCTGTATCACTG
GCGAAAGGCGGGTTTTACAACGTGCAAACCGGGAGGAGGGACGGGTTGGTGTCACAAGCTAAAAATGTAGCTCTTCCGGCTCCGAATGTCCCGATCCCT
CAAGCCATTGGCATGTTTGCTAGGAAGAACCTCTCCCCAATTGACATGGTTTATCTTCTCG
GAGGACACACGGTTGGTGTATCACACTGTGCATTTTTCCAAGACCGTCTGTACAACTTT
AAAAACACGGGACGACCCGACCCGAGCATGAACACAACCCTACTCAACTCCCTCAGGCAGACTTGCCCACCCAACTCGAACTCGGCCAACACCACGAACTTGGACCAGAACCCGACCAGC
TCTCTCGTGGTCGACAATTCCTACTACCAGCAACTCTTGAGACGTAATGGTATACTCCAGGTCGACCAAGACCTGGCTTCCAACCCTCTTACCGGGTTCATTGTGTCGGCAATCGCGAGT
CGGGCTGATTTCTCGGCCCGGTTTGGGCAGGCCATGGTCAACTTGGGTGCTGTGGATGTGCTCACTGGTCAGCAAGGGCAGATCAGGAAGTCTTGCCGGGCTGTTAACAAATAA

Retrieve as FASTA