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Entry information : LuPrx30(Lus10005681|PACid:23168876)
Entry ID 12150
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx30(Lus10005681|PACid:23168876)
Name LuPrx30(Lus10005681|PACid:23168876)
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx30
start..stop		 S start..stop
LuPrx77 367 1.61e-127 16..338 7..330
LuPrx13 362 8.35e-126 16..338 7..329
LuPrx29 358 5.68e-124 42..338 27..318
LuPrx110 349 4.94e-120 42..338 27..324
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 117500..118516 1015  
join(117500..118516)


exon

Literature and cross-references LuPrx30(Lus10005681|PACid:23168876)
DNA ref. Phytozome 12:   scaffold911 (117500..118516)
Protein sequence: LuPrx30(Lus10005681|PACid:23168876)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   338
PWM (Da):   %s   35963.46 Transmb domain:   %s   i13-35o
PI (pH):   %s   8.4
Sequence
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MKMHPSYYNE LTITSAIMIT ITTLFLISST QTTAAVVPQP PLTIGHYRAT CPQAETIVRQ VVGRMFAADP SITAALLRIH FHDCFSKGCD ASILIDPTPQ NPTPQKTAPP NRSIRGFNII  DAVKGALELA CPATVSCADA IALATRDAVA LSSRGGITYP VPTGRLDGLV SAVADVKLPA PTQSVFLAFT QFFQPLGFTL PEMVVLLGAH TVGSTHCSQF QDRLVNFTGT GLPDPSMDPA 
LVQELMVTCG RGGGNATAAL DQGTEFSFDG SFYREVARKR GVLAIDQELG TNPVTSGIVS RLGREEWRFR RSFGAAMVKL GRLGGSGSGK IRQNCSVI* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAAATGC ATCCGAGTTA TTACAACGAG CTCACGATCA CCTCTGCCAT TATGATCACC ATCACAACAC TCTTCCTGAT TTCATCCACT CAAACAACCG CCGCCGTCGT TCCGCAACCT  CCCCTCACAA TCGGCCACTA CCGAGCAACC TGCCCACAAG CCGAAACCAT CGTCCGACAA GTGGTCGGGA GAATGTTCGC CGCCGATCCA TCCATCACCG CCGCCCTCCT CCGCATCCAC  TTCCACGACT GCTTCTCCAA GGGCTGCGAT GCTTCCATCC TCATCGACCC CACGCCGCAA AACCCCACCC CGCAAAAGAC GGCGCCGCCG AACAGGTCCA TACGAGGTTT CAACATCATC  GACGCCGTCA AAGGTGCTTT AGAGCTCGCC TGCCCCGCCA CCGTCTCGTG CGCCGATGCT ATCGCGCTCG CCACGCGCGA CGCAGTCGCT CTATCTTCCC GCGGAGGGAT TACGTACCCC  GTCCCGACCG GACGGCTGGA CGGGCTTGTC TCCGCCGTCG CCGACGTCAA GCTTCCGGCG CCGACTCAGT CTGTGTTTTT AGCCTTCACT CAGTTTTTCC AACCGTTGGG CTTTACCTTA  CCTGAGATGG TTGTTTTATT GGGGGCCCAT ACAGTCGGGT CAACCCATTG CTCGCAGTTT CAGGACCGGT TGGTTAATTT CACGGGAACC GGACTGCCCG ACCCGAGTAT GGATCCGGCC  CTCGTTCAGG AGCTCATGGT CACGTGCGGT CGTGGTGGGG GCAATGCGAC TGCGGCTTTG GATCAAGGGA CGGAGTTCTC GTTCGATGGG TCATTTTATA GGGAGGTGGC GAGGAAGAGG  GGAGTGTTGG CAATCGATCA GGAGTTGGGT ACGAACCCGG TTACTTCGGG TATAGTTTCG AGATTGGGGA GGGAGGAATG GAGATTTAGG AGGAGCTTTG GTGCCGCTAT GGTGAAGTTG 
GGGAGGCTTG GTGGAAGTGG AAGTGGTAAA ATTAGGCAAA ATTGTAGTGT AATTTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAAATGC ATCCGAGTTA TTACAACGAG CTCACGATCA CCTCTGCCAT TATGATCACC ATCACAACAC TCTTCCTGAT TTCATCCACT CAAACAACCG CCGCCGTCGT TCCGCAACCT  CCCCTCACAA TCGGCCACTA CCGAGCAACC TGCCCACAAG CCGAAACCAT CGTCCGACAA GTGGTCGGGA GAATGTTCGC CGCCGATCCA TCCATCACCG CCGCCCTCCT CCGCATCCAC  TTCCACGACT GCTTCTCCAA GGGCTGCGAT GCTTCCATCC TCATCGACCC CACGCCGCAA AACCCCACCC CGCAAAAGAC GGCGCCGCCG AACAGGTCCA TACGAGGTTT CAACATCATC  GACGCCGTCA AAGGTGCTTT AGAGCTCGCC TGCCCCGCCA CCGTCTCGTG CGCCGATGCT ATCGCGCTCG CCACGCGCGA CGCAGTCGCT CTATCTTCCC GCGGAGGGAT TACGTACCCC  GTCCCGACCG GACGGCTGGA CGGGCTTGTC TCCGCCGTCG CCGACGTCAA GCTTCCGGCG CCGACTCAGT CTGTGTTTTT AGCCTTCACT CAGTTTTTCC AACCGTTGGG CTTTACCTTA  CCTGAGATGG TTGTTTTATT GGGGGCCCAT ACAGTCGGGT CAACCCATTG CTCGCAGTTT CAGGACCGGT TGGTTAATTT CACGGGAACC GGACTGCCCG ACCCGAGTAT GGATCCGGCC  CTCGTTCAGG AGCTCATGGT CACGTGCGGT CGTGGTGGGG GCAATGCGAC TGCGGCTTTG GATCAAGGGA CGGAGTTCTC GTTCGATGGG TCATTTTATA GGGAGGTGGC GAGGAAGAGG  GGAGTGTTGG CAATCGATCA GGAGTTGGGT ACGAACCCGG TTACTTCGGG TATAGTTTCG AGATTGGGGA GGGAGGAATG GAGATTTAGG AGGAGCTTTG GTGCCGCTAT GGTGAAGTTG 
GGGAGGCTTG GTGGAAGTGG AAGTGGTAAA ATTAGGCAAA ATTGTAGTGT AATTTAA 

Retrieve as FASTA