Entry information : LuPrx68(Lus10010716|PACid:23148736)
Entry ID 12177
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx68(Lus10010716|PACid:23148736)
Name LuPrx68(Lus10010716|PACid:23148736)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx68
start..stop
S start..stop
PtPrx15 483 2e-173 1..327 1..328
LuPrx163 470 7e-170 102..329 1..228
EguPrx61 459 3e-164 16..328 16..328
EcamPrx61 459 3e-164 16..328 16..328
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 137204..138193 990  
join(137204..138193)


exon

Literature and cross-references LuPrx68(Lus10010716|PACid:23148736)
DNA ref. Phytozome 12:   scaffold94 (137204..138193)
Protein sequence: LuPrx68(Lus10010716|PACid:23148736)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (308)
PWM (Da):   %s   36827.43 (34422.0)  
PI (pH):   %s   7.44 (6.66) Peptide Signal:   %s   cut: 22 range:22-329
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKSTHPNLLL LLLVTIPLAH SEQLAFDYYA KTCPKFDDIM KDAVTKKQIS NPTTAAAVLR LFFHDCMVDG CDGSTLVAST PFHKSERDAD LNLNLPGDAF EMVVRSKTEL ELKCPNVVSC  ADILSVATRN LVTMVGGPFY PVRLGRKDGL VSDPSRVEPN ILRPTMAISQ IIGFFVSRGF TVQEMVTLMG AHTIGFSHCR EFTNRLYNFS KETPTDPSLN PKFADGLKKL CENYTKDPTM 
SAFNDVMTPG KFDNMYYQNL EKGLGLLSSD EAMYMDQRTK PFVELYAKNE SAFFQAFAQA MEKVSNYKVK TGKDGEIRHR CDQINTVKI* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAATCGA CACACCCCAA CCTCCTCCTC CTCCTCCTCG TGACGATTCC CCTAGCACAT TCTGAACAGC TCGCGTTCGA CTACTATGCC AAAACATGCC CGAAATTCGA CGACATTATG  AAAGACGCCG TGACAAAGAA ACAAATCTCC AATCCGACCA CGGCTGCTGC AGTCCTCCGC CTCTTCTTCC ACGACTGCAT GGTGGACGGT TGCGATGGGT CCACCCTCGT GGCATCCACC  CCGTTCCACA AGAGCGAGCG GGACGCTGAC CTCAACCTCA ATCTCCCCGG TGATGCCTTC GAAATGGTGG TCCGTTCCAA GACCGAGTTG GAGCTCAAAT GCCCGAATGT GGTGTCGTGT  GCGGACATTC TATCTGTGGC AACTCGTAAC CTCGTGACAA TGGTCGGTGG ACCATTCTAC CCAGTTCGCC TAGGCCGAAA GGACGGCCTA GTTTCGGATC CTTCCCGGGT AGAGCCCAAC  ATACTCCGCC CCACAATGGC AATTTCTCAG ATCATCGGGT TCTTTGTTTC AAGAGGGTTC ACTGTTCAAG AAATGGTGAC GTTGATGGGA GCGCATACGA TCGGGTTCTC ACATTGTAGA  GAGTTCACTA ACCGGCTTTA CAATTTCAGC AAGGAGACCC CTACAGATCC ATCACTCAAC CCGAAATTTG CAGACGGGCT GAAGAAACTG TGTGAAAACT ATACAAAGGA CCCGACGATG  AGCGCATTCA ACGATGTGAT GACCCCCGGG AAATTCGACA ACATGTATTA CCAGAATCTC GAGAAAGGGC TAGGGCTTCT TTCGTCGGAT GAAGCTATGT ACATGGATCA GAGAACAAAG  CCTTTCGTTG AGCTTTATGC GAAGAATGAA TCGGCCTTCT TCCAAGCGTT TGCTCAAGCA ATGGAGAAGG TCAGTAACTA CAAGGTTAAG ACAGGGAAAG ATGGAGAGAT CAGACATAGG 
TGTGATCAGA TCAACACTGT AAAAATTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAATCGA CACACCCCAA CCTCCTCCTC CTCCTCCTCG TGACGATTCC CCTAGCACAT TCTGAACAGC TCGCGTTCGA CTACTATGCC AAAACATGCC CGAAATTCGA CGACATTATG  AAAGACGCCG TGACAAAGAA ACAAATCTCC AATCCGACCA CGGCTGCTGC AGTCCTCCGC CTCTTCTTCC ACGACTGCAT GGTGGACGGT TGCGATGGGT CCACCCTCGT GGCATCCACC  CCGTTCCACA AGAGCGAGCG GGACGCTGAC CTCAACCTCA ATCTCCCCGG TGATGCCTTC GAAATGGTGG TCCGTTCCAA GACCGAGTTG GAGCTCAAAT GCCCGAATGT GGTGTCGTGT  GCGGACATTC TATCTGTGGC AACTCGTAAC CTCGTGACAA TGGTCGGTGG ACCATTCTAC CCAGTTCGCC TAGGCCGAAA GGACGGCCTA GTTTCGGATC CTTCCCGGGT AGAGCCCAAC  ATACTCCGCC CCACAATGGC AATTTCTCAG ATCATCGGGT TCTTTGTTTC AAGAGGGTTC ACTGTTCAAG AAATGGTGAC GTTGATGGGA GCGCATACGA TCGGGTTCTC ACATTGTAGA  GAGTTCACTA ACCGGCTTTA CAATTTCAGC AAGGAGACCC CTACAGATCC ATCACTCAAC CCGAAATTTG CAGACGGGCT GAAGAAACTG TGTGAAAACT ATACAAAGGA CCCGACGATG  AGCGCATTCA ACGATGTGAT GACCCCCGGG AAATTCGACA ACATGTATTA CCAGAATCTC GAGAAAGGGC TAGGGCTTCT TTCGTCGGAT GAAGCTATGT ACATGGATCA GAGAACAAAG  CCTTTCGTTG AGCTTTATGC GAAGAATGAA TCGGCCTTCT TCCAAGCGTT TGCTCAAGCA ATGGAGAAGG TCAGTAACTA CAAGGTTAAG ACAGGGAAAG ATGGAGAGAT CAGACATAGG 
TGTGATCAGA TCAACACTGT AAAAATTTAA 

Retrieve as FASTA