Entry information : LuPrx78(Lus10013955|PACid:23170116)
Entry ID 12183
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang LI)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx78(Lus10013955|PACid:23170116)
Name LuPrx78(Lus10013955|PACid:23170116)
Class Class III peroxidase    [Orthogroup: Prx025]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx78
start..stop
S start..stop
LuPrx27 644 0 1..344 1..344
EcamPrx78 510 0 5..342 10..348
EguPrx287 507 0 5..342 10..348
EgrPrx81 507 0 5..342 10..348
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12183' 'join(223716..223970,224060..224260,224890..225468)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 223716..223970 253 N° 2 224060..224260 199 N° 3 224890..225468 577  
join(223716..223970,224060..224260,224890..225468)


exon

Literature and cross-references LuPrx78(Lus10013955|PACid:23170116)
DNA ref. Phytozome 12:   scaffold820 (223716..225468)
Protein sequence: LuPrx78(Lus10013955|PACid:23170116)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   344 (314)
PWM (Da):   %s   37955.63 (34743.8) Transmb domain:   %s   o10-32i
PI (pH):   %s   9.55 (9.58) Peptide Signal:   %s   cut: 31 range:31-344
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAILPHSPSTFLYISLIILLLHHISTATGAATNRRRLRQLSVNYY
ARTCPHLEQLVGSVTSQQFKVAPVSGPATIRLFFHDCFVE
GCDGSILISTKPGSRELAEKEAEDNKDLRAEGYDTVFKAKSLVETKCPGAISCSDILAIAARDYVHLTGGPYYQVKKGRFDGKTSKATKVPDNIPRSNSTVDALLTLFRTKGLSLQDMVV
LSGAHTIGFAHCKQFVTRLYDYKGTKNPDPTLDPRLLKELRISCPRVGSNDKVVVPFDVTTPFKFDHAYYLNLEGKLGLLGSDQGLWMDPRTKGVVQEMGRDRGKFFGMFGLAMEKMGEI
GVKSGRRHGEIRRDCSMVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction. Extra 3'.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAATTCTTCCACATTCTCCATCCACTTTCCTCTACATTTCTCTTATCATTCTTCTCCTCCATCACATTTCCACAGCCACCGGCGCAGCCACTAACCGCCGGAGGCTACGTCAGCTC
TCCGTCAACTATTACGCCAGGACATGTCCACATCTTGAGCAGCTGGTCGGCTCAGTCACTTCCCAGCAGTTCAAGGTGGCTCCGGTTTCTGGTCCCGCCACCATCCGCCTCTTCTTCCAC
GACTGCTTCGTCGAG
AGGTAGGCGATTCGGATCGAAATTATGTCAGACTATCATGTCAGACTAATTGTATTCTTCGAATGCTTCTCTAACTCTCTTTGATTCAAAGGGATGCGACGGGTC
AATTCTGATATCAACGAAGCCAGGAAGCAGAGAATTGGCAGAGAAGGAAGCAGAGGATAATAAGGACCTGAGAGCAGAAGGATACGACACCGTTTTCAAAGCCAAGTCCCTCGTTGAGAC
CAAGTGCCCCGGCGCCATCTCTTGCTCCGACATCCTCGCCATTGCCGCCCGTGACTATGTCCACTTA
TAGTAAGTCTGTCTCCCCCTTTGACCTCTCTCTCAATTATCCAAATTCCCTTA
ACCGAACCGGCCAAAATACTCGAATTGATCCAGTATTTTATTATTAGGTACGAATAAACTTAAAACGGTTATATACGGATACAGGTAGAATATACATGAAATATCTAAATCAAGTCCGAA
CCAATCGATTTAATTCCTATGGACATAGTTTTATAAGGAGATTTTTTTCTTTAAAATGCTGAATTTTAGTTGTGGTTTTAATTGAAAATTTACAAGGGTAAATATGAGTTTTACTACCTG
AAAAGTTTTTTAAAACCGTTATTATCTAAACTCGGAACTAAAATAGATAAAGGAGTAGATACTAACTATTTAAACCTGAATAATCACGTTGCCAAGCCTACTCCAAATATCATTTCATCT
CGAGTAACAAATAAATTAGATCATTGACCACTTAACTTTTACTTTTATTGCATATTTAACCATTAATAAGTGATACATATTCATTAAATTTTAGGATAAGTAACATTTTGTTCATTTAGT
TTTTAATTTATAACAAGCTCCTAACTTAAATTTTTAGATAATAACAATATTAAACCGGTTCATTCCAATAAATCATTACCTTTACTCGGATGGGCCAGACAGGTGGACCATACTACCAAG
TGAAGAAAGGAAGATTTGACGGGAAAACATCCAAGGCAACAAAAGTACCTGACAACATTCCACGGTCAAATTCGACCGTCGACGCCCTCCTTACCCTCTTCCGAACCAAAGGCCTGTCAC
TTCAAGACATGGTGGTCCTATCCGGAGCACATACGATTGGATTCGCACACTGCAAGCAATTCGTCACCAGGCTGTACGACTACAAGGGCACAAAAAACCCCGACCCCACCCTGGACCCGA
GGCTACTGAAGGAACTAAGAATTTCATGCCCTAGGGTCGGGTCGAATGATAAGGTAGTGGTGCCGTTCGATGTCACGACGCCGTTTAAGTTCGATCATGCTTACTACTTGAACTTGGAAG
GGAAGTTGGGCCTGCTGGGCTCGGATCAGGGCCTGTGGATGGATCCGAGGACCAAGGGTGTGGTCCAGGAGATGGGGAGGGATAGAGGCAAGTTTTTTGGGATGTTTGGTTTGGCTATGG
AGAAGATGGGGGAGATTGGTGTTAAGAGTGGGAGGAGACATGGTGAGATTAGGAGAGATTGTAGTATGGTTAATTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAATTCTTCCACATTCTCCATCCACTTTCCTCTACATTTCTCTTATCATTCTTCTCCTCCATCACATTTCCACAGCCACCGGCGCAGCCACTAACCGCCGGAGGCTACGTCAGCTC
TCCGTCAACTATTACGCCAGGACATGTCCACATCTTGAGCAGCTGGTCGGCTCAGTCACTTCCCAGCAGTTCAAGGTGGCTCCGGTTTCTGGTCCCGCCACCATCCGCCTCTTCTTCCAC
GACTGCTTCGTCGAG
GGATGCGACGGGTCAATTCTGATATCAACGAAGCCAGGAAGCAGAGAATTGGCAGAGAAGGAAGCAGAGGATAATAAGGACCTGAGAGCAGAAGGATACGACACC
GTTTTCAAAGCCAAGTCCCTCGTTGAGACCAAGTGCCCCGGCGCCATCTCTTGCTCCGACATCCTCGCCATTGCCGCCCGTGACTATGTCCACTTA
ACAGGTGGACCATACTACCAAGTG
AAGAAAGGAAGATTTGACGGGAAAACATCCAAGGCAACAAAAGTACCTGACAACATTCCACGGTCAAATTCGACCGTCGACGCCCTCCTTACCCTCTTCCGAACCAAAGGCCTGTCACTT
CAAGACATGGTGGTCCTATCCGGAGCACATACGATTGGATTCGCACACTGCAAGCAATTCGTCACCAGGCTGTACGACTACAAGGGCACAAAAAACCCCGACCCCACCCTGGACCCGAGG
CTACTGAAGGAACTAAGAATTTCATGCCCTAGGGTCGGGTCGAATGATAAGGTAGTGGTGCCGTTCGATGTCACGACGCCGTTTAAGTTCGATCATGCTTACTACTTGAACTTGGAAGGG
AAGTTGGGCCTGCTGGGCTCGGATCAGGGCCTGTGGATGGATCCGAGGACCAAGGGTGTGGTCCAGGAGATGGGGAGGGATAGAGGCAAGTTTTTTGGGATGTTTGGTTTGGCTATGGAG
AAGATGGGGGAGATTGGTGTTAAGAGTGGGAGGAGACATGGTGAGATTAGGAGAGATTGTAGTATGGTTAATTGA

Retrieve as FASTA