Entry information : LuPrx80(Lus10014517|PACid:23170876)
Entry ID 12184
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx80(Lus10014517|PACid:23170876)
Name LuPrx80(Lus10014517|PACid:23170876)
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx80
start..stop
S start..stop
LuPrx177 395 2e-141 1..191 141..331
LuPrx202 332 2e-118 1..191 1..187
LuPrx201 335 9e-118 1..191 137..323
RcPrx41 301 2e-104 1..191 136..320
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 94537..95112 576  
complement(join(94537..95112))


exon

Literature and cross-references LuPrx80(Lus10014517|PACid:23170876)
DNA ref. Phytozome 12:   scaffold107 (95112..94537)
Protein sequence: LuPrx80(Lus10014517|PACid:23170876)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   191
PWM (Da):   %s   21026.36  
PI (pH):   %s   9.05
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVGGPFYDVP LGRLDYRVSK SSAVPGNLPL PSTPMSQMID MFAARGFSVQ EMVALSGAHT IGFSHCEEFS GDLYNTTATA GGSNYNPRFA AALQKACANY KKDPSISVFN DIMTPNKFDN 
VYYQNLPKGL GLLASDHGLV KDDRTRPFVE MYAKDQNKFF KDFAVAMQKL SVYGVKTGRR GEIRHRCDAA N* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTCGGCG GCCCCTTCTA CGACGTCCCG CTCGGCCGCC TCGACTACCG CGTCTCCAAA TCCTCCGCCG TTCCCGGAAA CCTCCCGCTG CCGTCGACGC CGATGTCGCA GATGATCGAC  ATGTTCGCCG CCAGGGGATT CTCCGTCCAG GAGATGGTCG CCCTCAGCGG GGCCCACACC ATCGGGTTCT CCCACTGTGA AGAGTTCAGC GGAGATCTGT ACAACACCAC CGCCACGGCG  GGAGGAAGTA ATTACAACCC GCGATTTGCG GCGGCGTTGC AGAAGGCGTG CGCGAATTAC AAGAAGGACC CGTCGATCTC GGTGTTCAAC GATATAATGA CGCCGAACAA GTTCGACAAT  GTGTACTACC AGAACTTGCC CAAGGGGCTG GGTCTGCTGG CGTCGGACCA TGGGTTGGTG AAAGACGATC GAACTCGGCC GTTCGTGGAG ATGTATGCTA AGGATCAGAA CAAGTTCTTC 
AAGGATTTCG CCGTTGCGAT GCAGAAGCTG AGCGTGTATG GGGTGAAGAC TGGGAGACGA GGTGAGATTA GGCACAGGTG CGATGCTGCC AATTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTCGGCG GCCCCTTCTA CGACGTCCCG CTCGGCCGCC TCGACTACCG CGTCTCCAAA TCCTCCGCCG TTCCCGGAAA CCTCCCGCTG CCGTCGACGC CGATGTCGCA GATGATCGAC  ATGTTCGCCG CCAGGGGATT CTCCGTCCAG GAGATGGTCG CCCTCAGCGG GGCCCACACC ATCGGGTTCT CCCACTGTGA AGAGTTCAGC GGAGATCTGT ACAACACCAC CGCCACGGCG  GGAGGAAGTA ATTACAACCC GCGATTTGCG GCGGCGTTGC AGAAGGCGTG CGCGAATTAC AAGAAGGACC CGTCGATCTC GGTGTTCAAC GATATAATGA CGCCGAACAA GTTCGACAAT  GTGTACTACC AGAACTTGCC CAAGGGGCTG GGTCTGCTGG CGTCGGACCA TGGGTTGGTG AAAGACGATC GAACTCGGCC GTTCGTGGAG ATGTATGCTA AGGATCAGAA CAAGTTCTTC 
AAGGATTTCG CCGTTGCGAT GCAGAAGCTG AGCGTGTATG GGGTGAAGAC TGGGAGACGA GGTGAGATTA GGCACAGGTG CGATGCTGCC AATTGA 

Retrieve as FASTA