View Redoxidase 12191

Entry information : LuPrxII124(Lus10023180|PACid:23170446)

Entry ID	12191
Creation	2013-05-28 (Qiang Li)
Last sequence changes	2013-05-29 (Qiang Li)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-05-30 (Qiang LI)

Peroxidase information: LuPrxII124(Lus10023180|PACid:23170446)

Name

LuPrxII124(Lus10023180|PACid:23170446)

Class

Atypical 2-Cysteine peroxiredoxin (type II) [Orthogroup: PrxII001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Linaceae Linum

Organism

Linum usitatissimum (flax) [TaxId: 4006 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	LuPrxII124 start..stop	S start..stop
LuPrxII83	328	8.28e-118	1..165	1..165
LuPrxII125	314	5.89e-112	1..165	1..165
CclPrxII02	285	1.75e-100	1..162	1..162
CsPrxII02	285	2.25e-100	1..162	1..162

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12191' 'complement(join(825654..825913,826463..826542,826632..826786))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	826632..826786	153	N° 2	826463..826542	78	N° 3	825654..825913	258
complement(join(825654..825913,826463..826542,826632..826786))

Literature and cross-references LuPrxII124(Lus10023180|PACid:23170446)

DNA ref.	Phytozome 12: scaffold325 (826786..825654)

Protein sequence: LuPrxII124(Lus10023180|PACid:23170446)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	164
PWM (Da):	17425.2
PI (pH):	6

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAPIAAGASLPDGTLAHFDENDQLQQVSIHSLAAGKKVVIVGVPGAFTPTCSLKHVPGFIERADDLKAKGVAEIITISVNDPFVMKAWAKTFPENKHVKFLADGSATYTHALGVELDLKE
KGLGIRSRRFALLVDDLKVKAANIEEGGDFTVSSVDDIIKALDA*

Retrieve as FASTA

Remarks

Complete sequence from genomic. Correct prediction.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTCCGATAGCTGCCGGTGCTTCCTTACCTGACGGAACTCTCGCTCACTTCGACGAGAACGATCAGCTCCAGCAGGTCTCCATCCACTCGCTCGCCGCCGGCAAGAAGGTCGTCATC
GTCGGTGTCCCCGGCGCCTTCACTCCAACTTGCAGGTCATTCACAATCTTCTCTCTGATTCTTCCATTTCCCGCAATTGTGGAGGCATTAATCGCTTCAAGTATGGTTTTCTGTTTATAC
GCAGCTCTTGAAGCATGTACCTGGATTCATCGAAAGAGCGGATGACCTCAAAGCCAAAGGTGTTGCAGAGATAATCACTATTAGCGGTAGTTGCTCGATTCCCTCCCCCTCCCATTTGTT
TGACAATAATGATCTAATTCCGCTCTTCGTTTTCTAGCTTACAAACTAGATTTCAATGTCCTGTTTGTTCAATTAGCAGAATTCATTTCTACCCACCTGCTGACTGGCCCCTTTGACGAA
TTAGAATGAATTAGGTTCTGTAGCAATATTGTAAAATTGAATTCTCCACAGCTATAAACGAGTGAAGAGAACTCTAACCAAATGAATATATGACAGACTTACTTAAGATTTGGATTGAGA
TTTAGTTCTTGGTCTTGAAAAGTGTATTTTTGGAAATGATGGTTATGAATGGTCCGTGCTTGAGTCATATATTGTGAAAATTCAGTATTATATTCTACTGAATTCTTGTCTTCCCTGCGG
ATGCCATGGCCTGGATTTTGGTAAACAAACATGATATTGAGTTTTGGGATTCGTGGAGAGAAGTTAAAAAGCAAAAGTTGCTCACCATTTTAATTGGGAGATATGGACATATCCTGACAA
TCTGACATGGTTATTTGGATAAACTATATCTGCAGTGTGAATGATCCATTTGTGATGAAAGCTTGGGCAAAGACCTTCCCAGAGAACAAGCACGTGAAGTTCTTGGCAGATGGCTCTGCA
ACTTACACCCATGCTCTGGGTGTTGAGCTTGACCTAAAAGAGAAGGGACTAGGGATCAGGTCAAGGAGGTTTGCTCTACTGGTCGATGACCTCAAGGTGAAGGCTGCAAACATTGAAGAG
GGTGGAGACTTCACAGTTTCAAGTGTTGATGATATCATCAAGGCCCTTGATGCTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTCCGATAGCTGCCGGTGCTTCCTTACCTGACGGAACTCTCGCTCACTTCGACGAGAACGATCAGCTCCAGCAGGTCTCCATCCACTCGCTCGCCGCCGGCAAGAAGGTCGTCATC
GTCGGTGTCCCCGGCGCCTTCACTCCAACTTGCAGCTTGAAGCATGTACCTGGATTCATCGAAAGAGCGGATGACCTCAAAGCCAAAGGTGTTGCAGAGATAATCACTATTAGCGTGAAT
GATCCATTTGTGATGAAAGCTTGGGCAAAGACCTTCCCAGAGAACAAGCACGTGAAGTTCTTGGCAGATGGCTCTGCAACTTACACCCATGCTCTGGGTGTTGAGCTTGACCTAAAAGAG
AAGGGACTAGGGATCAGGTCAAGGAGGTTTGCTCTACTGGTCGATGACCTCAAGGTGAAGGCTGCAAACATTGAAGAGGGTGGAGACTTCACAGTTTCAAGTGTTGATGATATCATCAAG
GCCCTTGATGCTTGA

Retrieve as FASTA