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Entry information : LuPrxII83(Lus10015077|PACid:23171510)
Entry ID 12195
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrxII83(Lus10015077|PACid:23171510)
Name LuPrxII83(Lus10015077|PACid:23171510)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrxII83
start..stop		 S start..stop
LuPrxII124 328 8.28e-118 1..165 1..165
LuPrxII125 312 2.3e-111 1..165 1..165
CclPrxII02 284 2.65e-100 1..162 1..162
CsPrxII02 284 4.15e-100 1..162 1..162
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 410822..410976 153 N° 2 410652..410731 78 N° 3 409801..410060 258  
complement(join(409801..410060,410652..410731,410822..410976))


exon

Literature and cross-references LuPrxII83(Lus10015077|PACid:23171510)
DNA ref. Phytozome 12:   scaffold54 (410976..409801)
Protein sequence: LuPrxII83(Lus10015077|PACid:23171510)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   164 (311)
PWM (Da):   %s   17411.18 (33171.8)  
PI (pH):   %s   6 (7.72) Peptide Signal:   %s   cut: 21 range:21-331
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAPIAAGASLPDGTLAHFDENDQLQQVSIHSLAAGKKVVIVGVPGAFTPTCSLKHVPGFIERADDLKAKGVAEIITISVNDPFVMKAWAKTFPENKHVKFLADGSATYTHALGVELDLKE
KGLGIRSRRFALLVDDLKVKAANIEDGGDFTVSSVDDIIKALDA*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCCGATAGCTGCCGGTGCTTCCTTGCCTGACGGAACTCTCGCTCACTTCGACGAGAACGATCAGCTCCAGCAGGTCTCCATCCACTCCCTCGCCGCTGGCAAGAAGGTTGTCATC
GTCGGTGTTCCCGGCGCCTTCACTCCAACTTGCAGGTCATTCACAATCTTCTCTCTGATTCTTTCATTTCTCGCAATTGTAGCAGGCGTTAATCGCTTCAAGTATGGTTGTCTGTTTGTA
CGCAGCTCTTGAAGCATGTACCTGGATTCATCGAGAGAGCGGATGACCTCAAAGCCAAAGGTGTTGCAGAGATAATCACTATTAGCGGTAGTTGCTCGATTCCCTCCCCTTCCCATTTGT
TTGACAATAATGATCTAATTCCGCTCTTCATTTTCCAGCTTACAAACTAGATTTCAATGTCCTGTTTGTTCAATTAGCAGAATTCCTTTGTGGCTTTGTACCGGCTGACTGCCCCCTTTG
ATCTTCGCTATATTTGATGAATTGGAATGAATTAGGGTTCCTAGCAAATATTGTAAAATTGAATTCCCCACAGCTATAAACGAGCGAAGAGAACACGCAGGTGCAAAACTCTAACCAAAT
GAATATATGACAGACTTGCTGATGATTTTGGATTGAGATTTAGTTCTTGGTTCTGAAAAGTGTATTCTTGAAAATGATGGTTATGAATGGTCCGTGCTTGAGTCATATATAGTGAAAATT
CAGTATTATATTCTACTGAATTCTTCGTCTTCCCTGCGGAAGCCATGGCCTGGATTTTGGTAAACAAACATGATATTGAGTTTTGGGATTCGTGGAAAGAAGTTAAAAGGCAAAAGTTGC
TCTCCATTTTAATTGGAAGATATGGACATGTCCTGACAATCTGACATGGTGATTTGGATAAACTATCTCTATCTGCAGTGTGAATGATCCATTTGTGATGAAAGCTTGGGCAAAGACCTT
CCCAGAGAACAAGCACGTGAAGTTCTTGGCAGATGGCTCTGCAACTTACACCCATGCTCTGGGTGTTGAGCTTGACCTAAAGGAGAAGGGACTAGGGATCAGATCAAGGAGGTTTGCTCT
ACTGGTCGATGACCTCAAGGTGAAGGCTGCAAACATTGAAGATGGTGGAGACTTCACAGTTTCGAGTGTTGATGATATCATCAAGGCCCTTGATGCTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCCGATAGCTGCCGGTGCTTCCTTGCCTGACGGAACTCTCGCTCACTTCGACGAGAACGATCAGCTCCAGCAGGTCTCCATCCACTCCCTCGCCGCTGGCAAGAAGGTTGTCATC
GTCGGTGTTCCCGGCGCCTTCACTCCAACTTGCAGCTTGAAGCATGTACCTGGATTCATCGAGAGAGCGGATGACCTCAAAGCCAAAGGTGTTGCAGAGATAATCACTATTAGCGTGAAT
GATCCATTTGTGATGAAAGCTTGGGCAAAGACCTTCCCAGAGAACAAGCACGTGAAGTTCTTGGCAGATGGCTCTGCAACTTACACCCATGCTCTGGGTGTTGAGCTTGACCTAAAGGAG
AAGGGACTAGGGATCAGATCAAGGAGGTTTGCTCTACTGGTCGATGACCTCAAGGTGAAGGCTGCAAACATTGAAGATGGTGGAGACTTCACAGTTTCGAGTGTTGATGATATCATCAAG
GCCCTTGATGCTTGA

Retrieve as FASTA