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Entry information : LuRboh216
Entry ID 12225
Creation 2013-05-29 (Qiang LI)
Last sequence changes 2013-05-30 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang Li)
Peroxidase information: LuRboh216
Name LuRboh216
Class Respiratory burst oxidase homolog     [Orthogroup: Rboh003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuRboh216
start..stop		 S start..stop
LuRboh96 1422 0 17..781 35..845
ToriRboh11 946 0 48..781 86..799
DdruRboh09 932 0 26..781 62..809
PandeRboh08 930 0 48..781 91..804
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1409242..1409536 293 N° 2 1409595..1409805 209 N° 3 1409906..1410068 161 N° 4 1410538..1410843 304
N° 5 1411248..1411634 385 N° 6 1411728..1411823 94 N° 7 1411916..1412134 217 N° 8 1412212..1412373 160
N° 9 1412450..1412587 136 N° 10 1413242..1413367 124 N° 11 1413462..1413570 107 N° 12 1413605..1413738 132
join(1409242..1409536,1409595..1409805,1409906..1410068,1410538..1410843,1411248 ..1411634,1411728..1411823,1411916..1412134,1412212..1412373,1412450..1412587,14 13242..1413367,1413462..1413570,1413605..1413738)


exon

Literature and cross-references LuRboh216
DNA ref. Phytozome 12:   scaffold9 (1409242..1413738)
Protein sequence: LuRboh216
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   781 (307)
PWM (Da):   %s   88705.89 (32315.1) Transmb domain:   %s   o243-262i326-345o380-402i423-445o
PI (pH):   %s   8.93 (5.56) Peptide Signal:   %s   cut: 22 range:22-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
SSLSSSNSSSSSSSSSMQMQHHYCSHLLDNGPLEGGHPPPNAIRF
VEIGWEEVENRFNRLVIVRGESQPSVKGADFGYCVGIKDDPFMFVAGSDMINLWLLQCPEFAGQLLRALRGRRSSSRRRRRIKTDEEDSNYGSGITIRELYSHWHRLTSPSFSFQSSSNLLFDICDRDMDGKINQADITQGILLSASTNRLCVTHEEAQEHAASIMEVLDSTR
CGYIQEVSKSKAEIVFRAYWRRSWILLMWLIICFSLFTWKFIQYKHRMAFEVMGYCLSTAKGAAETLKFNMALILLPICRNTITWIRRSTRINSVIPFNDNINFHKIVGGGIVIGVILHG
GTHLACDFPRISGSDKATFRQTIAADFAYHQPSYVEILATTEVATGIAMVLLMAVAFTLATSWPRRQSALLPKSVRQVTGYNTFWYSHHLLILVYALLIVHSMFLFLTNNLFEKTTWMYI
VFPVILYGGERVWRAIRSDSYNVQVLEASMFHGKVLHLKLQKPQGFKYKSGMYMFIQCPQISKLQWHPFSLTSGPKDDHLSVHMRALGDWSYEVYGLFQEAILSGRKEFPKIYIDGGYGA
PSQDHVKYDVVLMIGLGIGATPFISILKDIRSQQDGSEETRRGKGPLRAYFYWVTREQSSFDWFRDSLRNISTSNQNMVSVIEVNNFLTTAHEEGDARSALISAAQALYRAKTGLDMLSR
YQEARTHFGRPNWFSIFSTLAIRHEHERIGKNINRKEPIAMFCVGAGVFYCGPPALGKELEELCTNFSTKTPTRFVFHKEHY

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing. PS is missing.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCGTCTTTGTCTTCTTCAAATTCTTCTTCCTCTTCCTCCTCTAGTTCAATGCAGATGCAGCATCACTATTGCAGTCACTTGCTGGATAATGGTCCTTTAGAAGGAGGACATCCACCTCCC
AATGCAATAAGGTTCGTAGAAATTGGTTGGGAGGAGGTGGAGAACCGGTTCAACCGGCTGGTTATCGTCAGGGGAGAGTCTCAACCATCAGTCAAAGGGGCAGATTTTGGCTACTGTGTA
GGTATAAAGGATGACCCTTTTATGTTCGTTGCAGGTTCTGACATGATCAATCTGTGTGTTCTGTGGTTTTTTTGGGTGAAAGCTCTAGTTGTGATTTTTGGTTCTTATGCTGCAGGGCTG
CTACAGTGTCCTGAATTTGCAGGTCAGCTTTTGAGGGCATTAAGAGGGAGAAGAAGCAGCAGCAGAAGAAGAAGAAGAATAAAAACAGATGAAGAAGATTCCAACTATGGTAGTGGAATC
ACAATAAGAGAACTTTATAGCCATTGGCATCGGCTGACTTCTCCTAGTTTCAGTTTCCAGTCAAGCTCCAACCTTTTATTTGACATATGTAATGCTCAACTTACCCTTGAAGTTATGCTC
ATCATTTCTGGAGATTATAAACAGTTTGTAACTTAACTGAAGCTTACACATTGATGTTACATTCTCAGATGTGACAGAGATATGGATGGAAAGATTAATCAGGCGGACATTACGCAAGGA
ATATTGCTAAGTGCTTCAACGAATAGACTGTGTGTAACACATGAGGAAGCACAAGAACATGCTGCTTCAATCATGGAGGTTCTGGATTCAACAAGATGTGGCTACATTGAGAGGTACACC
AACATCTGATAAAATCTTCCCTTCAAGTATTGTCATGAACCATTAAGTCCCAATAACTCGAGTTGTTGGGAGAGAGTTCATATATATTCATAACACGCCCTTTCAAACAAAAGCTCTTGA
GATTTGCACAACTTTAGTAAGCCATGTGCACGGATTGGCGCTAGCGGGATTCTATCACTGATCTATCGGTCTTTTAAGGCTCCAATACCATGCAATGAACCGTTTAGTTCCAATAACTCG
AGTTATTAGGGAGGGCTCATATTGATTTTTATGTTATTCATTAGTAGTATAGTAGTATACAAATTGTAAAGAGTTTTAACATTATATCTGGATTTAATTTCAACCATATAGTTAGTTGAA
ACATTGCAGCCTAATGAACTAGCTGCACTACTCAGAGCAACCTTGCCAGGAAGCAGCAACAGTGGAAAGCTTGCTGTCAATGGTGACAATGCAATAAGCCACCAAGAAGTGTCAAAATCC
AAGGCGGAAATCGTGTTTAGGGCTTACTGGAGGAGATCATGGATATTGCTGATGTGGTTGATCATCTGCTTCTCACTATTCACATGGAAGTTCATTCAGTACAAGCACAGAATGGCATTT
GAAGTAATGGGGTATTGCCTTTCCACTGCTAAAGGTGCAGCTGAGACACTCAAATTCAACATGGCTTTGATCCTCCTCCCCATTTGTCGAAACACCATCACTTGGATTCGGAGAAGCACA
AGGATCAACTCTGTTATTCCATTCAATGACAACATCAACTTCCACAAGAGGTAAGCATCCAAGGGCTCGTTTGGATGAGTTATTTTGCATGTGTGGTGGTACTTTGGAGCAAAATGATGC
ATTATTATTTGAGAATGTGAGATTTATGAGATGCAAAGGGGTTATGATGCAGGAATTATCTTGTTTAGCTAATGAGTCAATTCAATGTGGTATTTGCTAAACGTAAAGGCCAAAGTACTC
GAAATACCGGGGTATTTTAAATACCTCCACCCCCGACTATTTAAAATACTGCGGCCGCCATAGGTTTTTTTATTGGATGCTAAATGAATTATTTTGATCCAAATAACTCATCCAAACAAC
CTGTAAAGGTGTCAAACCCGCGAGTTAGGTTTAGATTTAAGGTTCGTTACCCTGTGAGTGACTCAATAATAACTTGTTGGTGTGTGTTCATCAGATAGTTGGTGGAGGGATAGTGATTGG
AGTAATACTACATGGTGGAACACATCTTGCTTGTGACTTCCCAAGAATAAGTGGTTCAGACAAGGCAACTTTCAGGCAAACCATAGCAGCCGACTTTGCTTATCACCAACCTTCATATGT
TGAGATATTGGCCACCACAGAGGTTGCAACTGGGATTGCAATGGTATTGCTAATGGCGGTTGCATTCACTCTGGCGACAAGCTGGCCTCGTCGCCAATCAGCTTTGCTTCCAAAGTCTGT
CAGACAAGTAACTGGTTACAACACATTTTGGTACTCTCACCATTTGCTCATACTTGTCTATGCCCTCCTCATTGTTCACTCCATGTTCCTCTTCCTTACCAACAATCTCTTTGAGAAGAC
TCTGTGAGTTCTTTGTTTCTCTTTTCCTTCTTTGTGCCTTAATGTGTAAAGAGGGTAGTGTTAATAACCTGCAAAAAGGTTTGATCTTTGTTGCAGACATGGATGTACATTGTCTTCCCA
GTGATTCTATACGGTGGCGAACGCGTATGGAGAGCCATTAGATCAGATTCTTACAATGTACAAGTTCTGGAAAAGTATGTACATAAATCTGAATGGTGGATGATAGCCTGTGAGATGAGA
TTCCCCAAAGGTTTGGACTGATGTTTTTAATGCCTGTGGAATGCAGGCAAGCATGTTCCATGGAAAGGTTTTGCATCTGAAGCTGCAGAAACCTCAAGGTTTCAAGTACAAGAGTGGGAT
GTACATGTTCATACAGTGTCCTCAGATTTCTAAGCTTCAGTGGCACCCATTTTCATTAACTTCAGGACCTAAAGATGATCACTTGAGTGTCCACATGAGAGCTCTTGGTGATTGGAGTTA
TGAAGTATATGGTCTCTTCCAAGAGAGGTGATAAATTGAACAAAGTTAACAAAACGGCAGAATTAAAACAGTAAGCTCAACCTGGTGTTTTTCTCCATTGTTAGGCAATATTATCTGGAA
GGAAGGAGTTTCCAAAGATATACATAGATGGAGGATATGGAGCTCCATCTCAAGACCATGTTAAGTATGATGTTGTCCTGATGATTGGTCTTGGCATTGGAGCTACACCCTTCATTAGTA
TCCTCAAAGACATAAGATCTCAGCAGAGGTAGACATAAGATTCTCAGCCTTTATCTTACTGTATAGATTTTGAGCTTTCTTGAACACTGAACCATGAAAGGCAGGATGGCAGTGAAGAAA
CCAGAAGGGGAAAGGGTCCTTTAAGAGCCTACTTCTACTGGGTGACAAGGGAGCAAAGTTCGTTTGATTGGTTCAGAGACAGTTTGAGGAACATATCCACATCAAATCAAAACATGGTTA
GTGTGAACTGATTGCAAATTAAGAGCAACAATCCCACACGCCATTTCTACTCATAGCTAATGCTGTTGACGAACCCAAGCTGCTCGCAAGTGGTTCGTGTTCGGTTATTGAAAAGGTTCG
ATCAAAACTCTGCTCGATTTTAAACGAGTTGGCTTGTTAGCAAGCTCGGCTCGTCAGCTCGATGAGCTTGGCTCGCGAGCCAGTTCGTTTGAGGCTCGATTACTAACTCGACTAAGGCTA
GAGAGTTGGCTCGAGTTTGGCTCAATTGAGACTCGTTTGTTAGCTCAATTAGTGTAGCTAGTGAGTTGGTTTTAGAGCTTTTAATGGTTCGAATTTGTGATTTTATCTAAAAAACAAAAA
TATGATTATCAATAATGTTGTCTTAATGACTAGTCATTTAATTAGACTTTGAGAGTACACTATTTTAGAATAGTTTAAATTTTGTATAAACTTATCCAAGTTGAGCTTGAAATTTAACTC
GGTTTGTAAAAACTTGCAAACAAGCCGAGTTGAACTCGTTAAGGCCTCTAGACGAGCCGAGCTTGGACTAATAATTAGTTTTTCGAGCCGGGCAAAGCTCGCTCGGCTCGTCAGAAGCCA
GCCCTACTCATAGCTGATAGATAACAAACTGAGTTTCCTAAACATGCAGCAGAAGGCTGTGATTGAGGTGAACAACTTCTTGACAACAGCACATGAAGAAGGAGATGCAAGGTCAGCTCT
GATCTCTGCAGCACAAGCACTGTATCGTGCCAAGACCGGCCTCGACATGTTGTCCCGGTATCAGAGGTAAAACACTAGCTAGTGAGAGTTCAGATTGGTTCTTATATTATTCATTAACAT
CGAGACCTGACAGTCTTGAACCCGAAATGGGGAGTTTCAGGAGGCTAGGACGCATTTTGGTCGACCTAACTGGTTCAGCATCTTCTCAACGCTGGCTATAAGACATGAACACGAGAGGAT
TGGTAAGAACATTAACAGAAAGGAACCAAAAGTTTCAATGCAGTGCACCGACTGTTCTTCATATATTGCCATGTTTTGCGTGGGTGCAGGAGTGTTCTACTGTGGACCGCCAGCGCTAGG
AAAAGAATTAGAGGAGCTATGTACCAATTTCTCAACCAAAACACCCACTCGATTTGTTTTCCACAAGGAACATTACTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCGTCTTTGTCTTCTTCAAATTCTTCTTCCTCTTCCTCCTCTAGTTCAATGCAGATGCAGCATCACTATTGCAGTCACTTGCTGGATAATGGTCCTTTAGAAGGAGGACATCCACCTCCC
AATGCAATAAGGTTCGTAGAAATTGGTTGGGAGGAGGTGGAGAACCGGTTCAACCGGCTGGTTATCGTCAGGGGAGAGTCTCAACCATCAGTCAAAGGGGCAGATTTTGGCTACTGTGTA
GGTATAAAGGATGACCCTTTTATGTTCGTTGCAGGTTCTGACATGATCAATCTGTGGCTGCTACAGTGTCCTGAATTTGCAGGTCAGCTTTTGAGGGCATTAAGAGGGAGAAGAAGCAGC
AGCAGAAGAAGAAGAAGAATAAAAACAGATGAAGAAGATTCCAACTATGGTAGTGGAATCACAATAAGAGAACTTTATAGCCATTGGCATCGGCTGACTTCTCCTAGTTTCAGTTTCCAG
TCAAGCTCCAACCTTTTATTTGACATATGTGACAGAGATATGGATGGAAAGATTAATCAGGCGGACATTACGCAAGGAATATTGCTAAGTGCTTCAACGAATAGACTGTGTGTAACACAT
GAGGAAGCACAAGAACATGCTGCTTCAATCATGGAGGTTCTGGATTCAACAAGATGTGGCTACATTGAGCAAGAAGTGTCAAAATCCAAGGCGGAAATCGTGTTTAGGGCTTACTGGAGG
AGATCATGGATATTGCTGATGTGGTTGATCATCTGCTTCTCACTATTCACATGGAAGTTCATTCAGTACAAGCACAGAATGGCATTTGAAGTAATGGGGTATTGCCTTTCCACTGCTAAA
GGTGCAGCTGAGACACTCAAATTCAACATGGCTTTGATCCTCCTCCCCATTTGTCGAAACACCATCACTTGGATTCGGAGAAGCACAAGGATCAACTCTGTTATTCCATTCAATGACAAC
ATCAACTTCCACAAGATAGTTGGTGGAGGGATAGTGATTGGAGTAATACTACATGGTGGAACACATCTTGCTTGTGACTTCCCAAGAATAAGTGGTTCAGACAAGGCAACTTTCAGGCAA
ACCATAGCAGCCGACTTTGCTTATCACCAACCTTCATATGTTGAGATATTGGCCACCACAGAGGTTGCAACTGGGATTGCAATGGTATTGCTAATGGCGGTTGCATTCACTCTGGCGACA
AGCTGGCCTCGTCGCCAATCAGCTTTGCTTCCAAAGTCTGTCAGACAAGTAACTGGTTACAACACATTTTGGTACTCTCACCATTTGCTCATACTTGTCTATGCCCTCCTCATTGTTCAC
TCCATGTTCCTCTTCCTTACCAACAATCTCTTTGAGAAGACTACATGGATGTACATTGTCTTCCCAGTGATTCTATACGGTGGCGAACGCGTATGGAGAGCCATTAGATCAGATTCTTAC
AATGTACAAGTTCTGGAAGCAAGCATGTTCCATGGAAAGGTTTTGCATCTGAAGCTGCAGAAACCTCAAGGTTTCAAGTACAAGAGTGGGATGTACATGTTCATACAGTGTCCTCAGATT
TCTAAGCTTCAGTGGCACCCATTTTCATTAACTTCAGGACCTAAAGATGATCACTTGAGTGTCCACATGAGAGCTCTTGGTGATTGGAGTTATGAAGTATATGGTCTCTTCCAAGAGGCA
ATATTATCTGGAAGGAAGGAGTTTCCAAAGATATACATAGATGGAGGATATGGAGCTCCATCTCAAGACCATGTTAAGTATGATGTTGTCCTGATGATTGGTCTTGGCATTGGAGCTACA
CCCTTCATTAGTATCCTCAAAGACATAAGATCTCAGCAGGATGGCAGTGAAGAAACCAGAAGGGGAAAGGGTCCTTTAAGAGCCTACTTCTACTGGGTGACAAGGGAGCAAAGTTCGTTT
GATTGGTTCAGAGACAGTTTGAGGAACATATCCACATCAAATCAAAACATGGTTAGTGTGATTGAGGTGAACAACTTCTTGACAACAGCACATGAAGAAGGAGATGCAAGGTCAGCTCTG
ATCTCTGCAGCACAAGCACTGTATCGTGCCAAGACCGGCCTCGACATGTTGTCCCGGTATCAGGAGGCTAGGACGCATTTTGGTCGACCTAACTGGTTCAGCATCTTCTCAACGCTGGCT
ATAAGACATGAACACGAGAGGATTGGTAAGAACATTAACAGAAAGGAACCAATTGCCATGTTTTGCGTGGGTGCAGGAGTGTTCTACTGTGGACCGCCAGCGCTAGGAAAAGAATTAGAG
GAGCTATGTACCAATTTCTCAACCAAAACACCCACTCGATTTGTTTTCCACAAGGAACATTACTAG

Retrieve as FASTA