View Redoxidase 12233

Entry information : LuRboh102(Lus10019390|PACid:23181586)

Entry ID	12233
Creation	2013-05-29 (Qiang LI)
Last sequence changes	2013-05-30 (Qiang Li)
Sequence status	partial
Reviewer	Not yet reviewed
Last annotation changes	2013-05-30 (Qiang Li)

Peroxidase information: LuRboh102(Lus10019390|PACid:23181586)

Name

LuRboh102(Lus10019390|PACid:23181586)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh002]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Linaceae Linum

Organism

Linum usitatissimum (flax) [TaxId: 4006 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	LuRboh102 start..stop	S start..stop
PtRboh05	913	0	33..668	187..846
AgluRboh06	895	0	33..668	181..843
EgrRboh06	893	0	33..668	179..857
EglRboh06	892	0	33..668	179..857

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12233' 'join(2024244..2024339,2025523..2025570,2025686..2025979,2026833..2027381,2027667..2027762,2027869..2028188,2028273..2028426,2028503..2028634,2028732..2028860,2028966..2029044,2029138..2029247)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2024244..2024339	94	N° 2	2025523..2025570	46	N° 3	2025686..2025979	292	N° 4	2026833..2027381	547
N° 5	2027667..2027762	94	N° 6	2027869..2028188	318	N° 7	2028273..2028426	152	N° 8	2028503..2028634	130
N° 9	2028732..2028860	127	N° 10	2028966..2029044	77	N° 11	2029138..2029247	108
join(2024244..2024339,2025523..2025570,2025686..2025979,2026833..2027381,2027667 ..2027762,2027869..2028188,2028273..2028426,2028503..2028634,2028732..2028860,20 28966..2029044,2029138..2029247)

Literature and cross-references LuRboh102(Lus10019390|PACid:23181586)

DNA ref.	Phytozome 12: scaffold25 (2024244..2029247)

Protein sequence: LuRboh102(Lus10019390|PACid:23181586)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	668 (303)
PWM (Da):	75561.21 (31999.5)	Transmb domain:	o256-278i298-320o330-349i490-507o
PI (pH):	8.68 (3.96)	Peptide Signal:	cut: 22 range:22-324

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MLNSVEIDKMADVPINEARPSKASHPPRMSVDCDKNGDGKLSESEVKEVILLSASANKLNNLKENAGTYAALIMDEMDPDQRGYIEIWQVATLLCGMVNGDGSAEASTKMNRQAMSLARAMIPSRYRSPLTRSFTNASEYIHENWKVSGYCL
CIAKATAETIKFNMAMILIPVCRRTLTSLRSTILGKFIPFDDNINFHKVISVAIAVASLAHTVAHVACNYPLIAQCPKDRFDTLIGSAFNYVQPTYGMLMMHSISVTGVLMDLIMAFSFT
LATHSFRRNVVKLPGVIHNLAGFNAFWYAHHLLAVAYVLLFLHGWFLLTEKPWYEKTTWMYICGPVMLYALERVFLSYRERTEPVNIIKAVIYSGNVLALYMTKPMGFKYKSGMYIFVKC
PNISSFEWHPFSITSAPDDDYLSVHIRTLGDWTKEMRNIFAKVCEPPQQAKPRGMNLMRMETRNVSDSNYDELQKTFPTILVKGPFGAPAQNYNKYDILLLVGLGIGATPMVSILKDLLN
GLKPMKGEFSVEAATKKYPERAYFYWVTREQASFEWFKGVMDDIAEYDRNHIIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSQSRIRTHFARPNWKRVFSELEKAHPSSHIG
VFYCGSVALVKTLRELCQDFSLNSTTRFHFHKENF

Retrieve as FASTA

Remarks

Partial sequence from genomic. Incorrect prediction. PS is missing.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTTGAATAGCGTCGAGATCGATAAGATGGCCGACGTGCCCATAAACGAGGCACGTCCCAGCAAGGCCTCACACCCGCCGAGAATGTCGGTGGACACATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATTAAGGAGGAAAATTTAAGAAAAGAAGAGAAAT
TTGATAATTTTATTTTCATGGAATAATACAATCGATTATGTTATGTGGTTGGAGCCTTAGAAATATCGGTTTTGCCCTATCTTTCTTTAATTAAAAAATCTAATCACACCTCACATGGCA
TCTTCTAAAAAAAAACAAGTGTGTGTTATTTTTTTGATAGATGATATAATTATAAATAAAGTAGTTATATTATTTTTTTTAATTTTAATTTTTTTCATTAATAATTATCACTTAAAATCA
TCCACCAATCACAGATTTATTCTAAAAATAACAAATTTCTTCCAAATCTCTAAAAAATTTGTCCCAAACTACTCCTAAGTAAATAAGCCAATGTTTCTGACCAACTTAATTGTGCAAATG
TTTACCAGACACCAGTGATTTCAATATTATAAAGTAATGCAGAATTCATTAAATTAATTTAATGCGTAATCTGGATGCAGGTGTGACAAGAACGGAGATGGAAAACTTTCAGAAAGTGAA
GTTAAGGAGAGGTATTAATGAGAAAGTAGATGCATGATTAGTTTAATTTAATTAATTTTATATTTTCACGGCGGATTATCGAAAAATAATGCAGTGTGTTAATTAATTGAATTGCAATAC
GATCAGGTGATACTGTTGAGCGCATCAGCGAACAAGCTAAACAACCTAAAGGAAAACGCAGGGACGTACGCAGCCTTAATAATGGACGAGATGGACCCTGACCAGCGTGGCTATATCGAG
ATATGGCAGGTCGCGACTCTCCTGTGCGGGATGGTCAACGGAGACGGCTCGGCCGAAGCGAGCACCAAAATGAACCGGCAAGCCATGTCTCTAGCCCGAGCCATGATTCCCAGTCGGTAT
AGATCCCCTTTGACTAGGTCCTTCACCAACGCCTCCGAGTACATCCACGAGAACTGGAAAAAGTCATTTGGGTCCTCGCCTTCTGGGCCGCGGTCAACGCCTACCTCTTCTACTGGAAAT
TCTCCATCTTCATTGGAACCCCACTCTTCCAGGTAAATTGGCTCGCCAACTGTTGGAGTTCACATCGTTCATATCCGCTTCTCATCCATTGTAATCTCTAAGTTTGAGTAATAACCATCT
TAAAATATAATTTCGAATAATAGATTTCACATCCGTCGATTTTCAGTTAATCCTGTAACAGTAAAAAAAAATCGGGTTTCACAAAGTTCATCATTTTTCAAAACACTTAGATTTTATAAA
TCATTGTAAAACTACATATCTCAAATATTTTATCATCCTAACTATAAAAACTATAAGAAATAGCAAGTATTCATAGAAGTGAGAGTTGGTTGGGGAAGTTAATAACGAATTATTTTCAGT
CTTTTTTCAATCGATTAAAAAATTTAATAAAAGTAAAGGTTAATTGATTAACCATAGTGATGATCGGTTAATTAGCTGACTTGAAACAAGTTGTCTAAGTTCGGTTCTGATTAAATAAAT
ATAAATAGGAAGAGACTAAGTGTTAAAGTTATTTCGGTTAATGAAATTTGAAATGTTTAACCGATTCAATGAATCTGAATATATGTCTCACCCTTGGAACATAAAAAATCTCATTACAAA
AATACTTTTATAGGAATTAAATTGATCGATTTGGGTTTGGTTTATATACTTCAATATGCATATCCTACCGGATACGGTGTATATATCAATTTTTAAAATTATTCATATATTAAAAAAATT
CAACCAACTTGAATTTTACCCTATACAGATTACCTATAATGATGGTTATTATTACCATCCTTCTACTTTCTGTAGGTCTCAGGATACTGTCTCTGTATAGCCAAGGCAACTGCCGAGACC
ATCAAGTTCAACATGGCCATGATCCTCATCCCTGTATGTCGCCGGACCTTGACATCTCTCCGATCGACAATCCTCGGAAAGTTCATCCCGTTCGACGACAACATCAACTTCCACAAGGTC
ATCTCGGTGGCGATCGCCGTGGCCTCCCTGGCCCACACCGTGGCACACGTGGCGTGTAACTATCCTCTGATAGCACAATGCCCAAAGGACAGGTTCGACACGCTCATCGGGAGCGCGTTT
AACTACGTCCAGCCTACTTACGGGATGCTGATGATGCATTCGATAAGCGTGACGGGTGTGTTGATGGATTTGATAATGGCGTTCTCCTTCACACTCGCGACCCACTCTTTCCGGAGGAAC
GTGGTGAAGCTGCCTGGGGTTATCCATAACTTGGCTGGTTTCAATGCTTTCTGGTATGCTCACCATTTGCTGGCCGTGGCTTATGTTCTGCTCTTCTTGCACGGTTGGTTCTTGCTCACT
GAGAAGCCTTGGTACGAGAAGACGCGGTATGTAATTTTTTTAAAAATCTTATATATGTCAGAAGTATTCGTATTTGTCGACCTGTAGTTAGCATAAATCCCTTTAATATCGGTATACGTG
CTAAATGTGTTAAAACTCTCGTTCTCGTATTACTGTAGTGTTATCGGTTTTCCCCCTATATAGTATACATATACATATCATACGCGAGCTTGAGTTAGAAAGTTTTAGCTCGTACAGAGC
TTTAGCTTGACTCGTTTACTATCCTTGACGAGCCAAACTCCAACTGATGATGGGTTTCGTTGTGGGCGCAGACGTGGATGTATATATGTGGTCCGGTGATGTTGTATGCTTTAGAGAGAG
TGTTTCTATCTTACAGGGAACGTACGGAGCCCGTCAACATAATTAAGAGGTACGTTTAATTTGCATGCTCATCCACGTACAAATATGAAGGCGTACATGCATGCATGCATGCATGCGATA
TATATAATACCAAGTTTTGGGTGCATTCATTGCAGGCAGTAATATACTCGGGGAATGTTCTGGCACTGTACATGACGAAGCCAATGGGGTTCAAGTACAAAAGTGGGATGTACATCTTCG
TGAAGTGTCCCAACATCTCCAGCTTCGAATGGCATCCTTTCTCAATAACATCCGCACCGGATGACGATTACTTGAGCGTCCACATACGAACACTAGGAGACTGGACCAAAGAAATGAGAA
ACATATTCGCCAAGGTATGCGAACCTCCCCAGCAAGCTAAACCCAGAGGAATGAACTTGATGAGAATGGAGACCAGGAATGTTTCCGACTCCAACTACGATGAACTTCAAAAAACACGTT
AGTATTTTTTTTTTGTTATCTCAGATCTACTCAATAAAAGCCTCGATCAGTACGTAGCTAACATGTTAGGAAAAAAAACAGGTTTCCGACGATCCTGGTGAAAGGACCGTTCGGAGCCCC
GGCCCAGAACTACAACAAGTACGACATATTGTTGCTGGTTGGACTAGGAATTGGAGCCACTCCTATGGTTAGCATTTTAAAGGATCTCCTGAATGGGCTCAAACCAATGAAGCCACAGTA
AGCCAATCGAATCTAGCTAGATTTTTAAAATCGAGAAATAAAATAAACAGATGGTAAAAATTGGAAATTGCAGGGAGAATTTTCAGTGGAGGCGGCAACGAAGAAGTACCCAGAGAGAGC
CTACTTCTACTGGGTTACAAGAGAACAAGCATCCTTCGAATGGTTTAAAGGAGTCATGGACGACATTGCCGAGTATGACCGAAATATGTGAGCTTGCTTACGCTTTCTTTCTTCTTCTTT
CTCTGTTTCAATTTCCGCGAGTCTACTAATATGAAGAAAAGAAAAAATTCCTTGACAACAACAGCATATAATCGAGATGCACAATTACTTGACAAGCGTGTACGAGGAAGGAGACGCTAG
GTCAGCACTCATTGCCATGGTCCAGAAGCTTCAGCACGCCAAGAATGGTGTCGATATCGTCTCCCAGAGCCGAGAGTACGTACTAACTAGGCGCATGCATGCATGCATGCAGTGGACATT
CATCTGGTTGAATTAATCAAGCTATTTTATTTTATTATGAATTAAAAATCCAATTTGCAGATAAGGACACACTTTGCAAGACCCAACTGGAAAAGGGTTTTCTCTGAGCTGGAGAAGGCG
CATCCGTCTTCTCATATCGCGGTACGTATACTATTGCAGTGTAAAGAAAAAGGAATTAATTGTGTTTATGATTAATTAATTAATTGAATTGGGTGCATGCATGGATGGATGCAGGGGTGT
TCTACTGTGGTAGTGTAGCGCTAGTGAAGACATTAAGGGAGCTGTGCCAGGACTTTAGTCTCAATTCAACTACCAGGTTCCATTTTCACAAGGAGAACTTCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTTGAATAGCGTCGAGATCGATAAGATGGCCGACGTGCCCATAAACGAGGCACGTCCCAGCAAGGCCTCACACCCGCCGAGAATGTCGGTGGACTGTGACAAGAACGGAGATGGAAAA
CTTTCAGAAAGTGAAGTTAAGGAGGTGATACTGTTGAGCGCATCAGCGAACAAGCTAAACAACCTAAAGGAAAACGCAGGGACGTACGCAGCCTTAATAATGGACGAGATGGACCCTGAC
CAGCGTGGCTATATCGAGATATGGCAGGTCGCGACTCTCCTGTGCGGGATGGTCAACGGAGACGGCTCGGCCGAAGCGAGCACCAAAATGAACCGGCAAGCCATGTCTCTAGCCCGAGCC
ATGATTCCCAGTCGGTATAGATCCCCTTTGACTAGGTCCTTCACCAACGCCTCCGAGTACATCCACGAGAACTGGAAAGTCTCAGGATACTGTCTCTGTATAGCCAAGGCAACTGCCGAG
ACCATCAAGTTCAACATGGCCATGATCCTCATCCCTGTATGTCGCCGGACCTTGACATCTCTCCGATCGACAATCCTCGGAAAGTTCATCCCGTTCGACGACAACATCAACTTCCACAAG
GTCATCTCGGTGGCGATCGCCGTGGCCTCCCTGGCCCACACCGTGGCACACGTGGCGTGTAACTATCCTCTGATAGCACAATGCCCAAAGGACAGGTTCGACACGCTCATCGGGAGCGCG
TTTAACTACGTCCAGCCTACTTACGGGATGCTGATGATGCATTCGATAAGCGTGACGGGTGTGTTGATGGATTTGATAATGGCGTTCTCCTTCACACTCGCGACCCACTCTTTCCGGAGG
AACGTGGTGAAGCTGCCTGGGGTTATCCATAACTTGGCTGGTTTCAATGCTTTCTGGTATGCTCACCATTTGCTGGCCGTGGCTTATGTTCTGCTCTTCTTGCACGGTTGGTTCTTGCTC
ACTGAGAAGCCTTGGTACGAGAAGACGACGTGGATGTATATATGTGGTCCGGTGATGTTGTATGCTTTAGAGAGAGTGTTTCTATCTTACAGGGAACGTACGGAGCCCGTCAACATAATT
AAGGCAGTAATATACTCGGGGAATGTTCTGGCACTGTACATGACGAAGCCAATGGGGTTCAAGTACAAAAGTGGGATGTACATCTTCGTGAAGTGTCCCAACATCTCCAGCTTCGAATGG
CATCCTTTCTCAATAACATCCGCACCGGATGACGATTACTTGAGCGTCCACATACGAACACTAGGAGACTGGACCAAAGAAATGAGAAACATATTCGCCAAGGTATGCGAACCTCCCCAG
CAAGCTAAACCCAGAGGAATGAACTTGATGAGAATGGAGACCAGGAATGTTTCCGACTCCAACTACGATGAACTTCAAAAAACGTTTCCGACGATCCTGGTGAAAGGACCGTTCGGAGCC
CCGGCCCAGAACTACAACAAGTACGACATATTGTTGCTGGTTGGACTAGGAATTGGAGCCACTCCTATGGTTAGCATTTTAAAGGATCTCCTGAATGGGCTCAAACCAATGAAGCCAGGA
GAATTTTCAGTGGAGGCGGCAACGAAGAAGTACCCAGAGAGAGCCTACTTCTACTGGGTTACAAGAGAACAAGCATCCTTCGAATGGTTTAAAGGAGTCATGGACGACATTGCCGAGTAT
GACCGAAATCATATAATCGAGATGCACAATTACTTGACAAGCGTGTACGAGGAAGGAGACGCTAGGTCAGCACTCATTGCCATGGTCCAGAAGCTTCAGCACGCCAAGAATGGTGTCGAT
ATCGTCTCCCAGAGCCGAATAAGGACACACTTTGCAAGACCCAACTGGAAAAGGGTTTTCTCTGAGCTGGAGAAGGCGCATCCGTCTTCTCATATCGGGGTGTTCTACTGTGGTAGTGTA
GCGCTAGTGAAGACATTAAGGGAGCTGTGCCAGGACTTTAGTCTCAATTCAACTACCAGGTTCCATTTTCACAAGGAGAACTTCTGA

Retrieve as FASTA