Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
158 |
PWM (Da): |
17881.31 |
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PI (pH):
| 9.34 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTKIYDFAPL DKKGEPFPFS QLKGKVVLIV NTASKCGFTP QFKGLEALYQ KYKDRGFIII GFPCNQFGNQ DPGTNDEIQS FCQVNYGVTF PILGKIDVNG DKTDPVFKYL KSQKKQLGLE
RVKWNFEKFL INREGVPVER YSSISKPEHI AKDIESLL
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (no intron). 5' end could be very long (more than 200 aa), no EST to confirm, and short 5' end confirmed in S.pombe. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACCAAGA TTTATGATTT TGCACCTCTC GACAAGAAGG GAGAGCCCTT CCCCTTTTCT CAATTGAAGG GAAAGGTTGT TTTGATCGTC AACACTGCCA GTAAGTGCGG TTTCACTCCT
CAATTCAAGG GTTTGGAGGC GCTCTACCAA AAGTACAAGG ACCGTGGCTT CATCATTATC GGTTTCCCTT GCAATCAGTT TGGTAACCAG GATCCTGGAA CCAATGACGA GATTCAAAGC
TTCTGCCAAG TGAATTACGG TGTCACATTC CCTATTTTGG GAAAGATTGA TGTCAATGGT GACAAAACAG ATCCTGTGTT CAAATACTTG AAGAGTCAAA AGAAGCAGCT TGGTCTCGAA
CGCGTCAAGT GGAACTTTGA AAAGTTTCTT ATCAACCGTG AGGGTGTGCC TGTGGAACGC TACTCTAGTA TCAGCAAGCC AGAGCACATT GCTAAGGACA TTGAGAGTCT TCTTTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACCAAGA TTTATGATTT TGCACCTCTC GACAAGAAGG GAGAGCCCTT CCCCTTTTCT CAATTGAAGG GAAAGGTTGT TTTGATCGTC AACACTGCCA GTAAGTGCGG TTTCACTCCT
CAATTCAAGG GTTTGGAGGC GCTCTACCAA AAGTACAAGG ACCGTGGCTT CATCATTATC GGTTTCCCTT GCAATCAGTT TGGTAACCAG GATCCTGGAA CCAATGACGA GATTCAAAGC
TTCTGCCAAG TGAATTACGG TGTCACATTC CCTATTTTGG GAAAGATTGA TGTCAATGGT GACAAAACAG ATCCTGTGTT CAAATACTTG AAGAGTCAAA AGAAGCAGCT TGGTCTCGAA
CGCGTCAAGT GGAACTTTGA AAAGTTTCTT ATCAACCGTG AGGGTGTGCC TGTGGAACGC TACTCTAGTA TCAGCAAGCC AGAGCACATT GCTAAGGACA TTGAGAGTCT TCTTTAA
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Retrieve as FASTA
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