View Redoxidase 12284

Entry information : DcryGPx02

Entry ID	12284
Creation	2013-05-30 (Nizar Fawal)
Last sequence changes	2013-05-30 (Nizar Fawal)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-08-20 (Catherine Mathe (Scipio))

Peroxidase information: DcryGPx02

Name

DcryGPx02

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Basidiomycota Tremellomycetes Dioszegia

Organism

Dioszegia cryoxerica [TaxId: 603311 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	DcryGPx02 start..stop	S start..stop
DcryGPx03	376	6.15e-136	1..185	1..185
CgaGPx02	281	3.34e-98	7..183	11..185
CnGPx02_JEC21	278	5.96e-97	7..183	11..185
CnGPx02_grubiiH99	275	4.89e-96	7..183	11..185

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	170609..170769	159	N° 2	170270..170447	176	N° 3	170093..170199	105	N° 4	169937..170045	107
complement(join(169937..170045,170093..170199,170270..170447,170609..170769))

Literature and cross-references DcryGPx02

DNA ref.	JGI genome: scaffold_30 (170769..169937)
Cluster/Prediction ref.	JGI gene: 334913

Protein sequence: DcryGPx02

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	184
PWM (Da):	19873.97	Transmb domain:	i7-26o
PI (pH):	6.94

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MNYINILGFETVPASAKGKSFYDLKASLPGSKGDYDFANLKGKAVLIVNTASKCGFTPQYTGLEELHKTYHDKGLEVLGFPSNEFGGQDPGTDDEIASFCQVNHGVTFPLMKKSEVNGNN
MNDVFAWLKANGAEVAGAGGVAGTTSIKWNFTKFLVDRNGHVVGRYSPSTKPETLKAEIEKLLQ*

Retrieve as FASTA

Remarks

complete sequence from genomics (3 introns)

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAACTACATCAACATCCTCGGCTTCGAAACTGTCCCTGCTAGCGCGAAGGGCAAGTCGTTCTACGACCTCAAAGCCAGTTTGCCGGGGAGTAAGGGGGATTACGATTTTGCCAATCTC
AAGGGCAAGGCGGTCTTGATTGTGAACACCGCGTCAAAATGGTGAGTCATGCTGTTCGTTTTGGAGCATTCCTCTGGGTTGTCAGCGGGCCAAGGGACGTGGTAGCAGGTGGGAGCGTTG
GCCGGAGGAGTCATGAGTACCGCTGATAGCTGGGGGTCTGCGCAGAAGCAAATTTGCCACCGGACCTAGCTGACACATCCAGCGCGGCTTCACTCCCCAATACACCGGCCTAGAAGAGCT
GCACAAGACGTACCATGACAAGGGTCTGGAGGTGCTCGGATTCCCCAGTAATGAGTTTGGCGGACAAGATCCGGGCACGGACGACGAGATCGCGTCGTTCTGCCAGGTCAACCACGGTGT
GACGTTCCCTCTCATGAAGAAGGTGAGTTTTGTCCTTTTCCCTTGGCTCGCCGCGGCTGGATCTGTAGATCGGACTGGAGCTGACCATACAGTCTCCGAGGTCAACGGAAACAACATGAA
CGACGTCTTCGCGTGGCTCAAGGCGAATGGGGCGGAAGTTGCTGGTGCTGGCGGTGTGGCCGGGACTACCTCGATCAAGTGGTAAGTTGCGCGGTCCTCTGGAGTTGATGGACGGAGCTG
ACCAGCAGGAGAACTTTACCAAATTCCTCGTCGACCGGAATGGCCATGTCGTCGGACGATACTCGCCCAGCACAAAGCCCGAGACGCTGAAGGCAGAGATTGAGAAGCTGCTGCAATAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAACTACATCAACATCCTCGGCTTCGAAACTGTCCCTGCTAGCGCGAAGGGCAAGTCGTTCTACGACCTCAAAGCCAGTTTGCCGGGGAGTAAGGGGGATTACGATTTTGCCAATCTC
AAGGGCAAGGCGGTCTTGATTGTGAACACCGCGTCAAAATGCGGCTTCACTCCCCAATACACCGGCCTAGAAGAGCTGCACAAGACGTACCATGACAAGGGTCTGGAGGTGCTCGGATTC
CCCAGTAATGAGTTTGGCGGACAAGATCCGGGCACGGACGACGAGATCGCGTCGTTCTGCCAGGTCAACCACGGTGTGACGTTCCCTCTCATGAAGAAGTCCGAGGTCAACGGAAACAAC
ATGAACGACGTCTTCGCGTGGCTCAAGGCGAATGGGGCGGAAGTTGCTGGTGCTGGCGGTGTGGCCGGGACTACCTCGATCAAGTGGAACTTTACCAAATTCCTCGTCGACCGGAATGGC
CATGTCGTCGGACGATACTCGCCCAGCACAAAGCCCGAGACGCTGAAGGCAGAGATTGAGAAGCTGCTGCAATAG

Retrieve as FASTA