Entry information : ParcCIIBB02
Entry ID 12288
Creation 2013-05-30 (Nizar Fawal)
Last sequence changes 2018-01-18 (Catherine Mathe)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-01-18 (Catherine Mathe)
Peroxidase information: ParcCIIBB02
Name ParcCIIBB02
Class Other class II peroxidase type B    [Orthogroup: CIIBB001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Polyporaceae Polyporus
Organism Polyporus arcularius    [TaxId: 5639 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ParcCIIBB02
start..stop
S start..stop
ParcCIIBB08 709 0 1..361 1..361
ParcCIIBB11 625 0 1..365 1..365
DsCIIBB08 624 0 1..365 1..367
TvCIIBB06 606 0 1..364 1..364
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12288' 'join(1051..1111,1170..1374,1434..1568,1623..1823,1877..2118,2189..2426,2479..2491)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1051..1111 59 N° 2 1170..1374 203 N° 3 1434..1568 133 N° 4 1623..1823 199
N° 5 1877..2118 240 N° 6 2189..2426 236 N° 7 2479..2491 11  
join(1051..1111,1170..1374,1434..1568,1623..1823,1877..2118,2189..2426,2479..249 1)


exon

Literature and cross-references ParcCIIBB02
DNA ref. JGI genome:   scaffold_216 (1051..2491)
Cluster/Prediction ref. JGI gene:   549633
Protein sequence: ParcCIIBB02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   364 (343)
PWM (Da):   %s   38077.74 (35865.6) Transmb domain:   %s   i52-74o
PI (pH):   %s   4.17 (4.13) Peptide Signal:   %s   cut: 22 range:22-364
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFKTLASFVSVLAAFQAANGALVRRVTCADGSVTANAACCALFPVIQDLQTNLFDGGECGEEVHESLRLTFHDAIGISPAIASRGQFGGGGADGSIAIFDDIETNFHANNGVDEIIGEQ
RPLIQRHNITTADFIQLAGAIGVSNCPGAPRLAVFVGRPDATQPAPDLTVPEPFDTVDSILQRFDDAGGFTPEEVVALLGSHTIAAADHVDPSIPGTPFDSTPELFDTQFFIETQLRGTL
FPGTGGNQGEVESPLRGELRLQSDSELARDSRTACEWQSFVNNQAKLQSAFAAAFRKMTILGHDEGSLVDCSDVVPTPPAPASQAHLPAGLTHNDVEQACASTPFPTLPTDPGPATSVAP
VPPS*

Retrieve as FASTA  
Remarks complete sequence from genomics (6 introns)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAAACACTCGCGTCTTTCGTCTCAGTTCTCGCGGCTTTCCAAGCCGCTAACGCGGTCAGTCGACCCCCAAGCTTCTTGGCGGCAGCTTCTTACTCCCACTTCTTTGGCTTA
GGTGCCCTCGTCCGCCGAGTTACTTGCGCTGACGGCAGCGTCACGGCGAACGCGGCGTGCTGCGCACTCTTCCCGGTTATTCAGGATCTCCAGACGAACCTCTTCGACGGCGGCGAGTGC
GGTGAGGAGGTCCACGAATCCCTCCGTCTGACCTTCCACGACGCCATCGGTATATCCCCCGCCATCGCCTCCCGCGGCCAATTCGG
GGGTCAGTACGAATGCTGCCTGCTAACTATGCAT
GCATGTCTGAGACTTGACTTTTGACAGTGGTGGCGGCGCCGACGGTTCGATCGCCATATTCGACGACATCGAGACTAACTTCCACGCGAACAACGGTGTCGATGAGATCATCGGCGAACA
ACGCCCGCTCATCCAGCGCCACAACATCACCACGGCTGACTT
TTGTAAGCCCACTGCATACTACAGTCTGCAATGCACACGACTGATCCTCCCCTTAGCATCCAGCTCGCTGGTGCCATC
GGTGTCAGCAACTGTCCTGGTGCTCCTCGCCTCGCGGTGTTTGTCGGCCGTCCTGATGCCACCCAGCCCGCGCCCGACTTGACCGTCCCGGAGCCCTTTGACACCGTCGACAGCATCCTG
CAGCGCTTCGACGATGCCGGTGGCTTCACCCCTGAAGAGGTTGTGGCTCTCCTTGGCTC
TCGTAAGTAAATTGACAAACAGCTCCATCTATCTTTGCTGACAAGTCACCTGTAGCCACAC
TATCGCCGCGGCCGACCACGTCGACCCCTCGATCCCCGGAACCCCCTTCGACTCGACGCCTGAGCTCTTCGACACTCAGTTCTTCATCGAGACGCAGCTCCGTGGTACGCTCTTCCCCGG
CACTGGCGGCAACCAGGGTGAGGTCGAGTCGCCCCTCCGCGGCGAGCTCCGTCTCCAGTCCGACTCTGAGCTCGCTCGTGACTCTCGCACTGCTTGCGAGTGGCAGTCCTTCGTCA
CAGT
GAGTATCCAACAGCCCTCCACTCTCCCCTTCTATGTGGACAGTGAACTCACTTGACGGCCGCATACAGACAACCAGGCCAAGCTCCAGTCCGCCTTCGCTGCTGCCTTCCGCAAGATGAC
GATCCTCGGCCACGACGAGGGCTCGCTGGTTGACTGCTCCGACGTCGTCCCGACTCCCCCAGCCCCGGCCTCCCAGGCGCACCTCCCCGCCGGTCTCACTCACAATGACGTCGAGCAGGC
TTGTGCCAGCACTCCCTTCCCCACTCTCCCCACCGACCCCGGTCCGGCCACCTCCGTTGCCCCTGT
GTGTAAGTCCTCGTGCAAACGAAGTTGCGGCCTAATACTGACTTGATTGCACAG

TCCTCCCTCTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAAACACTCGCGTCTTTCGTCTCAGTTCTCGCGGCTTTCCAAGCCGCTAACGGTGCCCTCGTCCGCCGAGTTACTTGCGCTGACGGCAGCGTCACGGCGAACGCGGCGTGC
TGCGCACTCTTCCCGGTTATTCAGGATCTCCAGACGAACCTCTTCGACGGCGGCGAGTGCGGTGAGGAGGTCCACGAATCCCTCCGTCTGACCTTCCACGACGCCATCGGTATATCCCCC
GCCATCGCCTCCCGCGGCCAATTCGG
TGGTGGCGGCGCCGACGGTTCGATCGCCATATTCGACGACATCGAGACTAACTTCCACGCGAACAACGGTGTCGATGAGATCATCGGCGAACAA
CGCCCGCTCATCCAGCGCCACAACATCACCACGGCTGACTT
CATCCAGCTCGCTGGTGCCATCGGTGTCAGCAACTGTCCTGGTGCTCCTCGCCTCGCGGTGTTTGTCGGCCGTCCTGAT
GCCACCCAGCCCGCGCCCGACTTGACCGTCCCGGAGCCCTTTGACACCGTCGACAGCATCCTGCAGCGCTTCGACGATGCCGGTGGCTTCACCCCTGAAGAGGTTGTGGCTCTCCTTGGC
TC
CCACACTATCGCCGCGGCCGACCACGTCGACCCCTCGATCCCCGGAACCCCCTTCGACTCGACGCCTGAGCTCTTCGACACTCAGTTCTTCATCGAGACGCAGCTCCGTGGTACGCTC
TTCCCCGGCACTGGCGGCAACCAGGGTGAGGTCGAGTCGCCCCTCCGCGGCGAGCTCCGTCTCCAGTCCGACTCTGAGCTCGCTCGTGACTCTCGCACTGCTTGCGAGTGGCAGTCCTTC
GTCA
ACAACCAGGCCAAGCTCCAGTCCGCCTTCGCTGCTGCCTTCCGCAAGATGACGATCCTCGGCCACGACGAGGGCTCGCTGGTTGACTGCTCCGACGTCGTCCCGACTCCCCCAGCC
CCGGCCTCCCAGGCGCACCTCCCCGCCGGTCTCACTCACAATGACGTCGAGCAGGCTTGTGCCAGCACTCCCTTCCCCACTCTCCCCACCGACCCCGGTCCGGCCACCTCCGTTGCCCCT
GT
TCCTCCCTCTTAA

Retrieve as FASTA