Entry information : ParcLiP06
Entry ID 12300
Creation 2013-05-30 (Nizar Fawal)
Last sequence changes 2018-01-18 (Catherine Mathe)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-01-18 (Catherine Mathe)
Peroxidase information: ParcLiP06
Name ParcLiP06
Class Lignin peroxidase    [Orthogroup: LiP004]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Polyporaceae Polyporus
Organism Polyporus arcularius    [TaxId: 5639 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ParcLiP06
start..stop
S start..stop
ParcLiP05 626 0 1..369 1..366
ParcLiP02 626 0 1..369 1..366
ParcLiP01 621 0 1..369 1..366
ParcLiP04 608 0 1..369 1..366
Gene structure Fichier Exons


exon

Literature and cross-references ParcLiP06
DNA ref. JGI genome:   scaffold_225 (26606..25155)
Cluster/Prediction ref. JGI gene:   142163
Protein sequence: ParcLiP06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   368 (347)
PWM (Da):   %s   39449.94 (37366.8)  
PI (pH):   %s   4.59 (4.54) Peptide Signal:   %s   cut: 22 range:22-368
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFKALLAAVSLIAALQGASGSPAQLTRRVACPDGKNTATNAACCALFPVRDDIIKNLFHNQCAEEAHESFRLTFHDAVAFSPAAEAEGKFAGGGADGSIVLFDKIETNFHANQGTDEIV
ALQKPIIARHSISTADFVQFAGAVGLSLCPGAPQVQFLLGRKDATRPAPDGLVPEPFDSVDKILARLLDVGFQDFEVVWLLSAHTIAAADFVDPTIPRTPFDSTPEIFDTQFFIETQLKG
TSFPGKGANQGEVLSPLRGEMRLQSDFLIARDNRTACEWQSFTNDQEKFQETFPDVFGRLAVLGVDNSTLIDCSEVLPVPPPLPRSAVPHFPAGKSIRDVEPACAETPFPTFPTDPGPAT
TIARVPNV*

Retrieve as FASTA  
Remarks complete sequence from genomics (5 introns)
DNA
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CDS
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